RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 NexmifQ5DTT1 1515 aa16.29■□□□□ 0.2
Rfx1-201ENSMUST00000005600 Ofd1Q80Z25 1017 aa16.28■□□□□ 0.2
Rfx1-201ENSMUST00000005600 Ift140E9PY46 1464 aa16.28■□□□□ 0.2
Rfx1-201ENSMUST00000005600 Rfx7F8VPJ6 1459 aa16.28■□□□□ 0.2
Rfx1-201ENSMUST00000005600 Plekhh2Q8C115 1491 aa16.27■□□□□ 0.19
Rfx1-201ENSMUST00000005600 Cwc22Q8C5N3 908 aaKnown RBP16.26■□□□□ 0.19
Rfx1-201ENSMUST00000005600 Rprd2Q6NXI6 1469 aaKnown RBP16.26■□□□□ 0.19
Rfx1-201ENSMUST00000005600 Zfp644E9QA22 1323 aa16.26■□□□□ 0.19
Rfx1-201ENSMUST00000005600 Gpatch8A2A6A1 1505 aa16.26■□□□□ 0.19
Rfx1-201ENSMUST00000005600 Mug1P28665 1476 aa16.26■□□□□ 0.19
Rfx1-201ENSMUST00000005600 PnisrA2AJT4 805 aaKnown RBP16.26■□□□□ 0.19
Rfx1-201ENSMUST00000005600 CadpsQ80TJ1 1355 aa16.25■□□□□ 0.19
Rfx1-201ENSMUST00000005600 Gcc2Q8CHG3 1679 aa16.25■□□□□ 0.19
Rfx1-201ENSMUST00000005600 Ttbk1Q6PCN3 1308 aa16.24■□□□□ 0.19
Rfx1-201ENSMUST00000005600 Rgl3Q3UYI5 709 aa16.24■□□□□ 0.19
Rfx1-201ENSMUST00000005600 Mtus2Q3UHD3 1353 aa16.24■□□□□ 0.19
Rfx1-201ENSMUST00000005600 Pak3Q61036 559 aa16.24■□□□□ 0.19
Rfx1-201ENSMUST00000005600 BC005561E9Q5E2 1589 aa16.22■□□□□ 0.19
Rfx1-201ENSMUST00000005600 Slc4a3P16283 1227 aa16.22■□□□□ 0.19
Rfx1-201ENSMUST00000005600 Kif21aQ9QXL2 1672 aa16.2■□□□□ 0.18
Rfx1-201ENSMUST00000005600 Setbp1Q9Z180 1582 aa16.19■□□□□ 0.18
Rfx1-201ENSMUST00000005600 Abcc5Q9R1X5 1436 aa16.18■□□□□ 0.18
Rfx1-201ENSMUST00000005600 Liat1Q810M6 228 aa16.18■□□□□ 0.18
Rfx1-201ENSMUST00000005600 Abca5Q8K448 1642 aa16.18■□□□□ 0.18
Rfx1-201ENSMUST00000005600 Rundc1Q0VDN7 615 aa16.17■□□□□ 0.18
Rfx1-201ENSMUST00000005600 Card11Q8CIS0 1159 aa16.17■□□□□ 0.18
Rfx1-201ENSMUST00000005600 Pla2r1Q62028 1487 aa16.17■□□□□ 0.18
Rfx1-201ENSMUST00000005600 Ccdc27Q3V036 639 aa16.16■□□□□ 0.18
Rfx1-201ENSMUST00000005600 Dapk1Q80YE7 1442 aa16.16■□□□□ 0.18
Rfx1-201ENSMUST00000005600 Pik3c2gO70167 1506 aa16.16■□□□□ 0.18
Rfx1-201ENSMUST00000005600 Anp32bQ9EST5 272 aaKnown RBP16.16■□□□□ 0.18
Rfx1-201ENSMUST00000005600 Tcerg1Q8CGF7 1100 aaKnown RBP16.15■□□□□ 0.18
Rfx1-201ENSMUST00000005600 NeflP08551 543 aa16.15■□□□□ 0.18
Rfx1-201ENSMUST00000005600 Plekhg5Q66T02 1073 aa16.15■□□□□ 0.18
Rfx1-201ENSMUST00000005600 Ipo9Q91YE6 1041 aa16.11■□□□□ 0.17
Rfx1-201ENSMUST00000005600 Grwd1Q810D6 446 aaKnown RBP16.1■□□□□ 0.17
Rfx1-201ENSMUST00000005600 WrnO09053 1401 aa16.1■□□□□ 0.17
Rfx1-201ENSMUST00000005600 Dhx9O70133 1380 aaKnown RBP16.09■□□□□ 0.17
Rfx1-201ENSMUST00000005600 Trak1Q6PD31 939 aa16.08■□□□□ 0.17
Rfx1-201ENSMUST00000005600 WizO88286 1684 aaKnown RBP16.08■□□□□ 0.16
Rfx1-201ENSMUST00000005600 Soga1E1U8D0 1418 aa16.08■□□□□ 0.16
Rfx1-201ENSMUST00000005600 L3mbtl2P59178 703 aa16.08■□□□□ 0.16
Rfx1-201ENSMUST00000005600 Egfem1Q8C088 590 aa16.08■□□□□ 0.16
Rfx1-201ENSMUST00000005600 Grin2aP35436 1464 aa16.07■□□□□ 0.16
Rfx1-201ENSMUST00000005600 Upf2A2AT37 1269 aaKnown RBP16.07■□□□□ 0.16
Rfx1-201ENSMUST00000005600 Il16O54824 1322 aa16.06■□□□□ 0.16
Rfx1-201ENSMUST00000005600 Fam135aQ6NS59 1506 aa16.06■□□□□ 0.16
Rfx1-201ENSMUST00000005600 Magi3Q9EQJ9 1476 aa16.06■□□□□ 0.16
Rfx1-201ENSMUST00000005600 Arhgef40Q3UPH7 1517 aa16.05■□□□□ 0.16
Rfx1-201ENSMUST00000005600 Kcnh8P59111 1102 aa16.05■□□□□ 0.16
Rfx1-201ENSMUST00000005600 Ncoa3O09000 1398 aa16.04■□□□□ 0.16
Rfx1-201ENSMUST00000005600 Hdac5Q9Z2V6 1113 aa16.04■□□□□ 0.16
Rfx1-201ENSMUST00000005600 Lamc1P02468 1607 aaKnown RBP16.03■□□□□ 0.16
Rfx1-201ENSMUST00000005600 Arhgap27A2AB59 869 aa16.03■□□□□ 0.16
Rfx1-201ENSMUST00000005600 Arhgef12Q8R4H2 1543 aaKnown RBP16.02■□□□□ 0.16
Rfx1-201ENSMUST00000005600 Kdm3bQ6ZPY7 1562 aa16.02■□□□□ 0.16
Rfx1-201ENSMUST00000005600 Ttll5Q8CHB8 1328 aa16.02■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Rock2P70336 1388 aa16.02■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Zbtb4Q5F293 982 aa16.01■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Adamts12Q811B3 1600 aa16■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Myom3A2ABU4 1439 aa16■□□□□ 0.15
Rfx1-201ENSMUST00000005600 SphkapQ6NSW3 1687 aa16■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Mug2P28666 1451 aa16■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Naip6Q9JIB6 1403 aa16■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Plb1Q3TTY0 1478 aa16■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Nup155Q99P88 1391 aaKnown RBP16■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Disp1Q3TDN0 1521 aa15.99■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Rad21Q61550 635 aaKnown RBP15.99■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Cc2d2bA0A286YDU8 1405 aa15.99■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Adgrb2Q8CGM1 1561 aa15.99■□□□□ 0.15
Rfx1-201ENSMUST00000005600 PxdnQ3UQ28 1475 aa15.99■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Ccdc9Q8VC31 543 aaKnown RBP15.99■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Rapgef6Q5NCJ1 1609 aa15.99■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Kdm6bQ5NCY0 1641 aa15.99■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Hsp90aa1P07901 733 aaKnown RBP15.99■□□□□ 0.15
Rfx1-201ENSMUST00000005600 AlkP97793 1621 aa15.99■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Zscan21Q07231 555 aa15.98■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Adcy10Q8C0T9 1614 aa15.97■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Zbtb7cQ8VCZ7 619 aa15.97■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Mbd5B1AYB6 1498 aa15.97■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Dhx57Q6P5D3 1388 aaKnown RBP15.96■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Map4P27546 1125 aaKnown RBP15.96■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Mak16Q8BGS0 296 aaKnown RBP15.96■□□□□ 0.15
Rfx1-201ENSMUST00000005600 Rpgrip1lQ8CG73 1264 aa15.96■□□□□ 0.14
Rfx1-201ENSMUST00000005600 Kif14L0N7N1 1674 aaKnown RBP15.95■□□□□ 0.14
Rfx1-201ENSMUST00000005600 Kif21bQ9QXL1 1668 aa15.94■□□□□ 0.14
Rfx1-201ENSMUST00000005600 Kank1E9Q238 1360 aa15.93■□□□□ 0.14
Rfx1-201ENSMUST00000005600 Map3k4O08648 1597 aa15.93■□□□□ 0.14
Rfx1-201ENSMUST00000005600 4933416C03RikQ3V063 378 aa15.93■□□□□ 0.14
Rfx1-201ENSMUST00000005600 Zfp444Q3TDV8 331 aaKnown RBP15.92■□□□□ 0.14
Rfx1-201ENSMUST00000005600 Wdr7Q920I9 1489 aa15.92■□□□□ 0.14
Rfx1-201ENSMUST00000005600 RalgapbQ8BQZ4 1484 aa15.91■□□□□ 0.14
Rfx1-201ENSMUST00000005600 Cdk13Q69ZA1 1511 aaKnown RBP15.91■□□□□ 0.14
Rfx1-201ENSMUST00000005600 Tdrd9Q14BI7 1383 aa15.91■□□□□ 0.14
Rfx1-201ENSMUST00000005600 DroshaQ5HZJ0 1373 aaKnown RBP15.91■□□□□ 0.14
Rfx1-201ENSMUST00000005600 Prkrip1Q9CWV6 186 aaKnown RBP15.9■□□□□ 0.14
Rfx1-201ENSMUST00000005600 DaxxO35613 739 aa15.9■□□□□ 0.14
Rfx1-201ENSMUST00000005600 Arhgap31A6X8Z5 1425 aa15.89■□□□□ 0.13
Rfx1-201ENSMUST00000005600 Arhgef11Q68FM7 1552 aa15.89■□□□□ 0.13
Rfx1-201ENSMUST00000005600 Mrc2Q64449 1479 aa15.89■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms