RNA–Protein interactions for RNA: YIL040W

APQ12, Transcript of Protein required for nuclear envelope morphology, yeast

Gene APQ12, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APQ12	YIL040W	UTR4	P32626	227 aa		0.99	□□□□□ -2.25
APQ12	YIL040W	RSM22	P36056	628 aa		0.99	□□□□□ -2.25
APQ12	YIL040W	STB6	P36085	766 aa		0.99	□□□□□ -2.25
APQ12	YIL040W	RCK2	P38623	610 aa		0.99	□□□□□ -2.25
APQ12	YIL040W	NPR3	P38742	1146 aa		0.99	□□□□□ -2.25
APQ12	YIL040W	YHR131C	P38835	850 aa		0.99	□□□□□ -2.25
APQ12	YIL040W	PSF2	P40359	213 aa		0.99	□□□□□ -2.25
APQ12	YIL040W	YNR061C	P53747	219 aa		0.99	□□□□□ -2.25
APQ12	YIL040W	MDG1	P53885	366 aa		0.99	□□□□□ -2.25
APQ12	YIL040W	DIA1	P54005	336 aa		0.99	□□□□□ -2.25
APQ12	YIL040W	HER2	Q03557	464 aa		0.99	□□□□□ -2.25
APQ12	YIL040W	CUE5	Q08412	411 aa	Known RBP	0.99	□□□□□ -2.25
APQ12	YIL040W	ETT1	Q08421	412 aa	Known RBP	0.99	□□□□□ -2.25
APQ12	YIL040W	SUI2	P20459	304 aa	Known RBP	0.98	□□□□□ -2.25
APQ12	YIL040W	ARA1	P38115	344 aa		0.98	□□□□□ -2.25
APQ12	YIL040W	MSG5	P38590	489 aa		0.98	□□□□□ -2.25
APQ12	YIL040W	GPI1	P53306	609 aa		0.98	□□□□□ -2.25
APQ12	YIL040W	AIM32	Q04689	311 aa		0.98	□□□□□ -2.25
APQ12	YIL040W	YDL057W	Q07379	328 aa		0.98	□□□□□ -2.25
APQ12	YIL040W	NUS1	Q12063	375 aa		0.98	□□□□□ -2.25
APQ12	YIL040W	RPS8A	P0CX39	200 aa	Known RBP	0.97	□□□□□ -2.25
APQ12	YIL040W	RPS8B	P0CX40	200 aa	Known RBP	0.97	□□□□□ -2.25
APQ12	YIL040W	APA1	P16550	321 aa	Known RBP	0.97	□□□□□ -2.25
APQ12	YIL040W	CRM1	P30822	1084 aa	Known RBP	0.97	□□□□□ -2.25
APQ12	YIL040W	GRX4	P32642	244 aa		0.97	□□□□□ -2.25
APQ12	YIL040W	FRE2	P36033	711 aa		0.97	□□□□□ -2.25
APQ12	YIL040W	PFS2	P42841	465 aa	Known RBP	0.97	□□□□□ -2.25
APQ12	YIL040W	YGR126W	P53274	230 aa		0.97	□□□□□ -2.25
APQ12	YIL040W	DPB4	Q04603	196 aa	Known RBP	0.97	□□□□□ -2.25
APQ12	YIL040W	PSK2	Q08217	1101 aa		0.97	□□□□□ -2.25
APQ12	YIL040W	YPL199C	Q08954	240 aa		0.97	□□□□□ -2.25
APQ12	YIL040W	PSK1	P31374	1356 aa		0.96	□□□□□ -2.26
APQ12	YIL040W	GLC7	P32598	312 aa	Known RBP	0.96	□□□□□ -2.26
APQ12	YIL040W	FMT1	P32785	401 aa		0.96	□□□□□ -2.26
APQ12	YIL040W	YKL133C	P36066	463 aa		0.96	□□□□□ -2.26
APQ12	YIL040W	GAB1	P41733	394 aa		0.96	□□□□□ -2.26
APQ12	YIL040W	GCD10	P41814	478 aa		0.96	□□□□□ -2.26
APQ12	YIL040W	RRT5	P43607	289 aa		0.96	□□□□□ -2.26
APQ12	YIL040W	BRO1	P48582	844 aa		0.96	□□□□□ -2.26
APQ12	YIL040W	POP6	P53218	158 aa		0.96	□□□□□ -2.26
APQ12	YIL040W	INA17	Q02888	182 aa		0.96	□□□□□ -2.26
APQ12	YIL040W	SKG3	Q06315	1026 aa		0.96	□□□□□ -2.26
APQ12	YIL040W	PSR1	Q07800	427 aa		0.96	□□□□□ -2.26
APQ12	YIL040W	FDH1	Q08911	376 aa		0.96	□□□□□ -2.26
APQ12	YIL040W	SAL1	D6W196	494 aa		0.95	□□□□□ -2.26
APQ12	YIL040W	RAD52	P06778	471 aa	Known RBP	0.95	□□□□□ -2.26
APQ12	YIL040W	GRX7	P38068	203 aa		0.95	□□□□□ -2.26
APQ12	YIL040W	ICS2	P38284	255 aa		0.95	□□□□□ -2.26
APQ12	YIL040W	YNG2	P38806	282 aa	Known RBP	0.95	□□□□□ -2.26
APQ12	YIL040W	UTP18	P40362	594 aa	Predicted RBP	0.95	□□□□□ -2.26
APQ12	YIL040W	OST1	P41543	476 aa	Known RBP	0.95	□□□□□ -2.26
APQ12	YIL040W	FLC3	P53121	802 aa		0.95	□□□□□ -2.26
APQ12	YIL040W	ART5	P53244	586 aa	Known RBP	0.95	□□□□□ -2.26
APQ12	YIL040W	CWC25	P53854	179 aa	Known RBP	0.95	□□□□□ -2.26
APQ12	YIL040W	RTT109	Q07794	436 aa		0.95	□□□□□ -2.26
APQ12	YIL040W	IRC25	Q07951	179 aa		0.95	□□□□□ -2.26
APQ12	YIL040W	MSS18	P08593	268 aa		0.94	□□□□□ -2.26
APQ12	YIL040W	VMA16	P23968	213 aa		0.94	□□□□□ -2.26
APQ12	YIL040W	ADH7	P25377	361 aa		0.94	□□□□□ -2.26
APQ12	YIL040W	BOS1	P25385	244 aa		0.94	□□□□□ -2.26
APQ12	YIL040W	RPL32	P38061	130 aa	Known RBP	0.94	□□□□□ -2.26
APQ12	YIL040W	MIX23	P38162	196 aa		0.94	□□□□□ -2.26
APQ12	YIL040W	YHR210C	P38893	341 aa		0.94	□□□□□ -2.26
APQ12	YIL040W	VPS4	P52917	437 aa		0.94	□□□□□ -2.26
APQ12	YIL040W	TGL2	P54857	326 aa		0.94	□□□□□ -2.26
APQ12	YIL040W	DOS2	P54858	310 aa		0.94	□□□□□ -2.26
APQ12	YIL040W	MPD2	Q99316	277 aa		0.94	□□□□□ -2.26
APQ12	YIL040W	YLR302C	O13544	120 aa		0.93	□□□□□ -2.26
APQ12	YIL040W	SUC2	P00724	532 aa		0.93	□□□□□ -2.26
APQ12	YIL040W	SPS22	P25380	463 aa		0.93	□□□□□ -2.26
APQ12	YIL040W	YCL049C	P25577	312 aa		0.93	□□□□□ -2.26
APQ12	YIL040W	PDB1	P32473	366 aa	Known RBP	0.93	□□□□□ -2.26
APQ12	YIL040W	PSD1	P39006	500 aa		0.93	□□□□□ -2.26
APQ12	YIL040W	RIC1	P40395	1056 aa		0.93	□□□□□ -2.26
APQ12	YIL040W	DFG10	P40526	253 aa		0.93	□□□□□ -2.26
APQ12	YIL040W	HIS6	P40545	261 aa		0.93	□□□□□ -2.26
APQ12	YIL040W	YGR127W	P53275	312 aa		0.93	□□□□□ -2.26
APQ12	YIL040W	MKC7	P53379	596 aa		0.93	□□□□□ -2.26
APQ12	YIL040W	FOL1	P53848	824 aa		0.93	□□□□□ -2.26
APQ12	YIL040W	YOR365C	Q08844	703 aa		0.93	□□□□□ -2.26
APQ12	YIL040W	NUC1	P08466	329 aa		0.92	□□□□□ -2.26
APQ12	YIL040W	SAM1	P10659	382 aa	Known RBP	0.92	□□□□□ -2.26
APQ12	YIL040W	SAM2	P19358	384 aa	Known RBP	0.92	□□□□□ -2.26
APQ12	YIL040W	PWP1	P21304	576 aa	Known RBP	0.92	□□□□□ -2.26
APQ12	YIL040W	IME2	P32581	645 aa		0.92	□□□□□ -2.26
APQ12	YIL040W	NPL6	P32832	435 aa		0.92	□□□□□ -2.26
APQ12	YIL040W	YBL055C	P34220	418 aa	Predicted RBP	0.92	□□□□□ -2.26
APQ12	YIL040W	DRN1	P53255	507 aa	Known RBP	0.92	□□□□□ -2.26
APQ12	YIL040W	MUB1	Q03162	620 aa		0.92	□□□□□ -2.26
APQ12	YIL040W	YKU80	Q04437	629 aa		0.92	□□□□□ -2.26
APQ12	YIL040W	RBS1	Q05672	457 aa	Known RBP	0.92	□□□□□ -2.26
APQ12	YIL040W	NCE102	Q12207	173 aa	RIP-Chip data	0.92	□□□□□ -2.26	not detected
APQ12	YIL040W	NFT1	P0CE68	1218 aa		0.91	□□□□□ -2.26
APQ12	YIL040W	CRH1	P53301	507 aa		0.91	□□□□□ -2.26
APQ12	YIL040W	BEM2	P39960	2167 aa	Known RBP	0.91	□□□□□ -2.26
APQ12	YIL040W	MTF2	P10849	440 aa		0.9	□□□□□ -2.27
APQ12	YIL040W	GLK1	P17709	500 aa	Known RBP	0.9	□□□□□ -2.27
APQ12	YIL040W	IMG1	P25626	169 aa		0.9	□□□□□ -2.27
APQ12	YIL040W	SYN8	P31377	255 aa		0.9	□□□□□ -2.27
APQ12	YIL040W	NUP133	P36161	1157 aa		0.9	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms