RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 PATL2C9JE40 543 aaKnown RBP11.84□□□□□ -0.51
PHGDH-222ENST00000641587 ERC2O15083 957 aa11.84□□□□□ -0.51
PHGDH-222ENST00000641587 FOXP2O15409 715 aa11.84□□□□□ -0.51
PHGDH-222ENST00000641587 GNAT2P19087 354 aa11.84□□□□□ -0.51
PHGDH-222ENST00000641587 PPARAQ07869 468 aa11.84□□□□□ -0.51
PHGDH-222ENST00000641587 TTLL4Q14679 1199 aa11.84□□□□□ -0.51
PHGDH-222ENST00000641587 FAM160B2Q86V87 743 aa11.84□□□□□ -0.51
PHGDH-222ENST00000641587 STAG1Q8WVM7 1258 aa11.84□□□□□ -0.51
PHGDH-222ENST00000641587 GMCL1Q96IK5 515 aa11.84□□□□□ -0.51
PHGDH-222ENST00000641587 ALDH8A1Q9H2A2 487 aaPredicted RBP11.84□□□□□ -0.51
PHGDH-222ENST00000641587 MTIF3Q9H2K0 278 aaKnown RBP11.84□□□□□ -0.51
PHGDH-222ENST00000641587 CERS4Q9HA82 394 aa11.84□□□□□ -0.51
PHGDH-222ENST00000641587 ZNF287Q9HBT7 754 aa11.84□□□□□ -0.51
PHGDH-222ENST00000641587 TRMT13Q9NUP7 481 aaKnown RBP11.84□□□□□ -0.51
PHGDH-222ENST00000641587 PRR12Q9ULL5 1215 aa11.84□□□□□ -0.51
PHGDH-222ENST00000641587 SYNPO2Q9UMS6 1093 aa11.84□□□□□ -0.51
PHGDH-222ENST00000641587 STX8Q9UNK0 236 aa11.84□□□□□ -0.51
PHGDH-222ENST00000641587 SLC4A7Q9Y6M7 1214 aa11.84□□□□□ -0.51
PHGDH-222ENST00000641587 TTC41PQ6P2S7 1318 aa11.84□□□□□ -0.51
PHGDH-222ENST00000641587 EPOPA6NHQ4 379 aa11.83□□□□□ -0.52
PHGDH-222ENST00000641587 CABYRO75952 493 aa11.83□□□□□ -0.52
PHGDH-222ENST00000641587 ARHGEF15O94989 841 aa11.83□□□□□ -0.52
PHGDH-222ENST00000641587 ZFYP08048 801 aaPredicted RBP11.83□□□□□ -0.52
PHGDH-222ENST00000641587 FDX1P10109 184 aa11.83□□□□□ -0.52
PHGDH-222ENST00000641587 KCNQ1P51787 676 aa11.83□□□□□ -0.52
PHGDH-222ENST00000641587 CTDSPL2Q05D32 466 aa11.83□□□□□ -0.52
PHGDH-222ENST00000641587 PDE4BQ07343 736 aa11.83□□□□□ -0.52
PHGDH-222ENST00000641587 KRT40Q6A162 431 aa11.83□□□□□ -0.52
PHGDH-222ENST00000641587 KIAA1211Q6ZU35 1233 aa11.83□□□□□ -0.52
PHGDH-222ENST00000641587 DEFB128Q7Z7B8 93 aa11.83□□□□□ -0.52
PHGDH-222ENST00000641587 CHURC1Q8WUH1 139 aa11.83□□□□□ -0.52
PHGDH-222ENST00000641587 NAPBQ9H115 298 aa11.83□□□□□ -0.52
PHGDH-222ENST00000641587 IL17RBQ9NRM6 502 aa11.83□□□□□ -0.52
PHGDH-222ENST00000641587 CCPG1Q9ULG6 757 aa11.83□□□□□ -0.52
PHGDH-222ENST00000641587 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.83□□□□□ -0.52
PHGDH-222ENST00000641587 SALL3Q9BXA9 1300 aa11.83□□□□□ -0.52
PHGDH-222ENST00000641587 TET1Q8NFU7 2136 aa11.83□□□□□ -0.52
PHGDH-222ENST00000641587 TRANK1O15050 2925 aa11.83□□□□□ -0.52
PHGDH-222ENST00000641587 TANC1Q9C0D5 1861 aa11.83□□□□□ -0.52
PHGDH-222ENST00000641587 PTPRSQ13332 1948 aa11.82□□□□□ -0.52
PHGDH-222ENST00000641587 SCN10AQ9Y5Y9 1956 aa11.82□□□□□ -0.52
PHGDH-222ENST00000641587 NFIBO00712 420 aa11.82□□□□□ -0.52
PHGDH-222ENST00000641587 ZEB2O60315 1214 aa11.82□□□□□ -0.52
PHGDH-222ENST00000641587 CA3P07451 260 aa11.82□□□□□ -0.52
PHGDH-222ENST00000641587 ATP2A2P16615 1042 aaKnown RBP11.82□□□□□ -0.52
PHGDH-222ENST00000641587 SLC16A2P36021 539 aa11.82□□□□□ -0.52
PHGDH-222ENST00000641587 TKFCQ3LXA3 575 aa11.82□□□□□ -0.52
PHGDH-222ENST00000641587 TTC22Q5TAA0 569 aa11.82□□□□□ -0.52
PHGDH-222ENST00000641587 IQSEC1Q6DN90 963 aa11.82□□□□□ -0.52
PHGDH-222ENST00000641587 TTBK2Q6IQ55 1244 aa11.82□□□□□ -0.52
PHGDH-222ENST00000641587 SPRED2Q7Z698 418 aa11.82□□□□□ -0.52
PHGDH-222ENST00000641587 IL27Q8NEV9 243 aa11.82□□□□□ -0.52
PHGDH-222ENST00000641587 PCDHA11Q9Y5I1 949 aa11.82□□□□□ -0.52
PHGDH-222ENST00000641587 TNKSO95271 1327 aa11.82□□□□□ -0.52
PHGDH-222ENST00000641587 TSPY2A6NKD2 308 aa11.81□□□□□ -0.52
PHGDH-222ENST00000641587 TRIM6-TRIM34B2RNG4 842 aa11.81□□□□□ -0.52
PHGDH-222ENST00000641587 MYL3P08590 195 aa11.81□□□□□ -0.52
PHGDH-222ENST00000641587 BMP1P13497 986 aa11.81□□□□□ -0.52
PHGDH-222ENST00000641587 ALDH5A1P51649 535 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-222ENST00000641587 PURAQ00577 322 aaKnown RBP11.81□□□□□ -0.52
PHGDH-222ENST00000641587 BAATQ14032 418 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-222ENST00000641587 SKIV2LQ15477 1246 aaKnown RBP11.81□□□□□ -0.52
PHGDH-222ENST00000641587 CCDC96Q2M329 555 aa11.81□□□□□ -0.52
PHGDH-222ENST00000641587 ZMYM1Q5SVZ6 1142 aa11.81□□□□□ -0.52
PHGDH-222ENST00000641587 RCSD1Q6JBY9 416 aa11.81□□□□□ -0.52
PHGDH-222ENST00000641587 SLC30A10Q6XR72 485 aa11.81□□□□□ -0.52
PHGDH-222ENST00000641587 PI4K2BQ8TCG2 481 aa11.81□□□□□ -0.52
PHGDH-222ENST00000641587 MORC4Q8TE76 937 aa11.81□□□□□ -0.52
PHGDH-222ENST00000641587 FSD1Q9BTV5 496 aa11.81□□□□□ -0.52
PHGDH-222ENST00000641587 NACAP1Q9BZK3 213 aa11.81□□□□□ -0.52
PHGDH-222ENST00000641587 OSBPL3Q9H4L5 887 aa11.81□□□□□ -0.52
PHGDH-222ENST00000641587 VTA1Q9NP79 307 aa11.81□□□□□ -0.52
PHGDH-222ENST00000641587 COL4A4P53420 1690 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-222ENST00000641587 PLA2G6O60733 806 aa11.8□□□□□ -0.52
PHGDH-222ENST00000641587 ICAM1P05362 532 aa11.8□□□□□ -0.52
PHGDH-222ENST00000641587 DUSP28Q4G0W2 176 aa11.8□□□□□ -0.52
PHGDH-222ENST00000641587 BMP2KLQ5H9B9 411 aa11.8□□□□□ -0.52
PHGDH-222ENST00000641587 FAM47CQ5HY64 1035 aa11.8□□□□□ -0.52
PHGDH-222ENST00000641587 VPS53Q5VIR6 699 aa11.8□□□□□ -0.52
PHGDH-222ENST00000641587 RPUSD2Q8IZ73 545 aaKnown RBP11.8□□□□□ -0.52
PHGDH-222ENST00000641587 OR6J1Q8NGC5 347 aa11.8□□□□□ -0.52
PHGDH-222ENST00000641587 COPS5Q92905 334 aa11.8□□□□□ -0.52
PHGDH-222ENST00000641587 RILPL2Q969X0 211 aa11.8□□□□□ -0.52
PHGDH-222ENST00000641587 WDR11Q9BZH6 1224 aa11.8□□□□□ -0.52
PHGDH-222ENST00000641587 RANBP17Q9H2T7 1088 aaKnown RBP11.8□□□□□ -0.52
PHGDH-222ENST00000641587 Q9Y3F1 56 aa11.8□□□□□ -0.52
PHGDH-222ENST00000641587 MTCH2Q9Y6C9 303 aa11.8□□□□□ -0.52
PHGDH-222ENST00000641587 FRMPD2Q68DX3 1309 aaPredicted RBP11.8□□□□□ -0.52
PHGDH-222ENST00000641587 TRIP12Q14669 1992 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-222ENST00000641587 PTPDC1A2A3K4 754 aa11.79□□□□□ -0.52
PHGDH-222ENST00000641587 RANBP6O60518 1105 aaKnown RBP11.79□□□□□ -0.52
PHGDH-222ENST00000641587 SLC3A2P08195 630 aaKnown RBP11.79□□□□□ -0.52
PHGDH-222ENST00000641587 GSPT1P15170 499 aaKnown RBP11.79□□□□□ -0.52
PHGDH-222ENST00000641587 NBPF20Q3BBV1 942 aa11.79□□□□□ -0.52
PHGDH-222ENST00000641587 TMEM67Q5HYA8 995 aa11.79□□□□□ -0.52
PHGDH-222ENST00000641587 GPCPD1Q9NPB8 672 aa11.79□□□□□ -0.52
PHGDH-222ENST00000641587 BDP1A6H8Y1 2624 aa11.78□□□□□ -0.52
PHGDH-222ENST00000641587 CALML3P27482 149 aa11.78□□□□□ -0.52
PHGDH-222ENST00000641587 PLA2G5P39877 138 aa11.78□□□□□ -0.52
PHGDH-222ENST00000641587 TAP1Q03518 808 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 198.5 ms