RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 SOGA3Q5TF21 947 aa15.58■□□□□ 0.08
SPIN3-239ENST00000640463 KRT25Q7Z3Z0 450 aa15.58■□□□□ 0.08
SPIN3-239ENST00000640463 SMCR8Q8TEV9 937 aaPredicted RBP15.58■□□□□ 0.08
SPIN3-239ENST00000640463 CCDC102AQ96A19 550 aa15.58■□□□□ 0.08
SPIN3-239ENST00000640463 SEMA6BQ9H3T3 888 aa15.58■□□□□ 0.08
SPIN3-239ENST00000640463 C6orf50Q9HD87 102 aa15.58■□□□□ 0.08
SPIN3-239ENST00000640463 CCNL1Q9UK58 526 aaPredicted RBP15.58■□□□□ 0.08
SPIN3-239ENST00000640463 FAN1Q9Y2M0 1017 aa15.58■□□□□ 0.08
SPIN3-239ENST00000640463 MYL1P05976 194 aa15.58■□□□□ 0.08
SPIN3-239ENST00000640463 PPP4CP60510 307 aa15.58■□□□□ 0.08
SPIN3-239ENST00000640463 COA7Q96BR5 231 aa15.58■□□□□ 0.08
SPIN3-239ENST00000640463 RRP36Q96EU6 259 aaKnown RBP15.58■□□□□ 0.08
SPIN3-239ENST00000640463 ZNHIT6Q9NWK9 470 aaKnown RBP15.58■□□□□ 0.08
SPIN3-239ENST00000640463 NAV1Q8NEY1 1877 aa15.58■□□□□ 0.08
SPIN3-239ENST00000640463 TNRC6CQ9HCJ0 1690 aaKnown RBP15.57■□□□□ 0.08
SPIN3-239ENST00000640463 SBF2Q86WG5 1849 aa15.57■□□□□ 0.08
SPIN3-239ENST00000640463 AHDC1Q5TGY3 1603 aaPredicted RBP15.57■□□□□ 0.08
SPIN3-239ENST00000640463 EIF6P56537 245 aaKnown RBP15.57■□□□□ 0.08
SPIN3-239ENST00000640463 GPS2Q13227 327 aa15.57■□□□□ 0.08
SPIN3-239ENST00000640463 MEA1Q16626 185 aa15.57■□□□□ 0.08
SPIN3-239ENST00000640463 CLEC10AQ8IUN9 316 aa15.57■□□□□ 0.08
SPIN3-239ENST00000640463 TXLNBQ8N3L3 684 aa15.57■□□□□ 0.08
SPIN3-239ENST00000640463 CCDC47Q96A33 483 aaKnown RBP15.57■□□□□ 0.08
SPIN3-239ENST00000640463 UIMC1Q96RL1 719 aa15.57■□□□□ 0.08
SPIN3-239ENST00000640463 C7orf25Q9BPX7 421 aa15.57■□□□□ 0.08
SPIN3-239ENST00000640463 SEC63Q9UGP8 760 aaKnown RBP15.57■□□□□ 0.08
SPIN3-239ENST00000640463 SNED1Q8TER0 1413 aa15.57■□□□□ 0.08
SPIN3-239ENST00000640463 CYLC1P35663 651 aaPredicted RBP15.57■□□□□ 0.08
SPIN3-239ENST00000640463 KRT83P78385 493 aa15.57■□□□□ 0.08
SPIN3-239ENST00000640463 ATP2B2Q01814 1243 aa15.57■□□□□ 0.08
SPIN3-239ENST00000640463 GRAPQ13588 217 aa15.57■□□□□ 0.08
SPIN3-239ENST00000640463 ZNF804AQ7Z570 1209 aa15.57■□□□□ 0.08
SPIN3-239ENST00000640463 GRAPLQ8TC17 118 aaPredicted RBP15.57■□□□□ 0.08
SPIN3-239ENST00000640463 AK8Q96MA6 479 aa15.57■□□□□ 0.08
SPIN3-239ENST00000640463 SPZ1Q9BXG8 430 aa15.57■□□□□ 0.08
SPIN3-239ENST00000640463 MYH10P35580 1976 aa15.57■□□□□ 0.08
SPIN3-239ENST00000640463 BICDL2A1A5D9 508 aa15.57■□□□□ 0.08
SPIN3-239ENST00000640463 EPHB6O15197 1021 aa15.57■□□□□ 0.08
SPIN3-239ENST00000640463 GPSM2P81274 684 aa15.57■□□□□ 0.08
SPIN3-239ENST00000640463 GSPT2Q8IYD1 628 aaKnown RBP15.57■□□□□ 0.08
SPIN3-239ENST00000640463 FAM207AQ9NSI2 230 aaPredicted RBP15.57■□□□□ 0.08
SPIN3-239ENST00000640463 GOLGB1Q14789 3259 aaKnown RBP15.56■□□□□ 0.08
SPIN3-239ENST00000640463 ZNF263O14978 683 aa15.56■□□□□ 0.08
SPIN3-239ENST00000640463 KRT86O43790 486 aa15.56■□□□□ 0.08
SPIN3-239ENST00000640463 GNA11P29992 359 aa15.56■□□□□ 0.08
SPIN3-239ENST00000640463 ZBED6P86452 979 aa15.56■□□□□ 0.08
SPIN3-239ENST00000640463 REXO1Q8N1G1 1221 aaKnown RBP15.56■□□□□ 0.08
SPIN3-239ENST00000640463 NOC3LQ8WTT2 800 aaKnown RBP15.56■□□□□ 0.08
SPIN3-239ENST00000640463 GJA10Q969M2 543 aa15.56■□□□□ 0.08
SPIN3-239ENST00000640463 DRC1Q96MC2 740 aa15.56■□□□□ 0.08
SPIN3-239ENST00000640463 LZTS2Q9BRK4 669 aa15.56■□□□□ 0.08
SPIN3-239ENST00000640463 LRWD1Q9UFC0 647 aa15.56■□□□□ 0.08
SPIN3-239ENST00000640463 LEMD3Q9Y2U8 911 aa15.56■□□□□ 0.08
SPIN3-239ENST00000640463 POTEMA6NI47 508 aa15.56■□□□□ 0.08
SPIN3-239ENST00000640463 MYMKA6NI61 221 aa15.56■□□□□ 0.08
SPIN3-239ENST00000640463 IPO7O95373 1038 aaKnown RBP15.56■□□□□ 0.08
SPIN3-239ENST00000640463 TDP2O95551 362 aa15.56■□□□□ 0.08
SPIN3-239ENST00000640463 LDHCP07864 332 aa15.56■□□□□ 0.08
SPIN3-239ENST00000640463 NEDD1Q8NHV4 660 aa15.56■□□□□ 0.08
SPIN3-239ENST00000640463 CALML4Q96GE6 196 aa15.56■□□□□ 0.08
SPIN3-239ENST00000640463 CUEDC2Q9H467 287 aa15.56■□□□□ 0.08
SPIN3-239ENST00000640463 PDE2AO00408 941 aaPredicted RBP15.55■□□□□ 0.08
SPIN3-239ENST00000640463 SLC37A4O43826 429 aa15.55■□□□□ 0.08
SPIN3-239ENST00000640463 UFL1O94874 794 aa15.55■□□□□ 0.08
SPIN3-239ENST00000640463 TNNT3P45378 269 aaPredicted RBP15.55■□□□□ 0.08
SPIN3-239ENST00000640463 USP14P54578 494 aa15.55■□□□□ 0.08
SPIN3-239ENST00000640463 GRB10Q13322 594 aa15.55■□□□□ 0.08
SPIN3-239ENST00000640463 TMED8Q6PL24 325 aaPredicted RBP15.55■□□□□ 0.08
SPIN3-239ENST00000640463 C16orf86Q6ZW13 317 aa15.55■□□□□ 0.08
SPIN3-239ENST00000640463 LRRC47Q8N1G4 583 aaKnown RBP15.55■□□□□ 0.08
SPIN3-239ENST00000640463 GLIS3Q8NEA6 775 aa15.55■□□□□ 0.08
SPIN3-239ENST00000640463 CAGE1Q8TC20 777 aa15.55■□□□□ 0.08
SPIN3-239ENST00000640463 BBXQ8WY36 941 aaPredicted RBP15.55■□□□□ 0.08
SPIN3-239ENST00000640463 NUDT12Q9BQG2 462 aa15.55■□□□□ 0.08
SPIN3-239ENST00000640463 CD209Q9NNX6 404 aa15.55■□□□□ 0.08
SPIN3-239ENST00000640463 JADE2Q9NQC1 790 aa15.55■□□□□ 0.08
SPIN3-239ENST00000640463 EIF3JO75822 258 aaKnown RBP15.55■□□□□ 0.08
SPIN3-239ENST00000640463 IDEP14735 1019 aa15.55■□□□□ 0.08
SPIN3-239ENST00000640463 RFC4P35249 363 aa15.55■□□□□ 0.08
SPIN3-239ENST00000640463 LRRC41Q15345 812 aa15.55■□□□□ 0.08
SPIN3-239ENST00000640463 RC3H1Q5TC82 1133 aaKnown RBP15.55■□□□□ 0.08
SPIN3-239ENST00000640463 PAPD7Q5XG87 772 aaKnown RBP15.55■□□□□ 0.08
SPIN3-239ENST00000640463 NUP58Q9BVL2 599 aa15.55■□□□□ 0.08
SPIN3-239ENST00000640463 BLOC1S4Q9NUP1 217 aa15.55■□□□□ 0.08
SPIN3-239ENST00000640463 TUBB4BP68371 445 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 MRPS25P82663 173 aaKnown RBP15.54■□□□□ 0.08
SPIN3-239ENST00000640463 ZSCAN26Q16670 478 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 FKBP15Q5T1M5 1219 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 SV2BQ7L1I2 683 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 C2CD5Q86YS7 1000 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 FAM114A1Q8IWE2 563 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 EXOC4Q96A65 974 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 ZFP91Q96JP5 570 aaPredicted RBP15.54■□□□□ 0.08
SPIN3-239ENST00000640463 CCDC42Q96M95 316 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 C8orf37Q96NL8 207 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 PNMA5Q96PV4 448 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 CDK5RAP2Q96SN8 1893 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 EIF3CLB5ME19 914 aaKnown RBP15.54■□□□□ 0.08
SPIN3-239ENST00000640463 AMPD3Q01432 767 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 PICALMQ13492 652 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms