RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 LNPKQ9C0E8 428 aa16.3■□□□□ 0.2
HLA-C-210ENST00000640219 SLC38A10Q9HBR0 1119 aa16.3■□□□□ 0.2
HLA-C-210ENST00000640219 Q9Y3F1 56 aa16.3■□□□□ 0.2
HLA-C-210ENST00000640219 SCN5AQ14524 2016 aa16.29■□□□□ 0.2
HLA-C-210ENST00000640219 BRWD1Q9NSI6 2320 aa16.29■□□□□ 0.2
HLA-C-210ENST00000640219 WDFY4Q6ZS81 3184 aa16.29■□□□□ 0.2
HLA-C-210ENST00000640219 LCHNA4D1U4 455 aa16.29■□□□□ 0.2
HLA-C-210ENST00000640219 SOWAHBA6NEL2 793 aa16.29■□□□□ 0.2
HLA-C-210ENST00000640219 USP17L12C9JPN9 530 aa16.29■□□□□ 0.2
HLA-C-210ENST00000640219 USP17L21D6R901 530 aa16.29■□□□□ 0.2
HLA-C-210ENST00000640219 NDUFB10O96000 172 aa16.29■□□□□ 0.2
HLA-C-210ENST00000640219 IQSEC1Q6DN90 963 aa16.29■□□□□ 0.2
HLA-C-210ENST00000640219 FAM133AQ8N9E0 248 aa16.29■□□□□ 0.2
HLA-C-210ENST00000640219 RETREG2Q8NC44 543 aa16.29■□□□□ 0.2
HLA-C-210ENST00000640219 PDGFCQ9NRA1 345 aa16.29■□□□□ 0.2
HLA-C-210ENST00000640219 HOMER2Q9NSB8 354 aa16.29■□□□□ 0.2
HLA-C-210ENST00000640219 POTEB3A0JP26 581 aa16.28■□□□□ 0.2
HLA-C-210ENST00000640219 GRXCR2A6NFK2 248 aa16.28■□□□□ 0.2
HLA-C-210ENST00000640219 BAIAP3O94812 1187 aa16.28■□□□□ 0.2
HLA-C-210ENST00000640219 IQCF3P0C7M6 154 aa16.28■□□□□ 0.2
HLA-C-210ENST00000640219 MX1P20591 662 aa16.28■□□□□ 0.2
HLA-C-210ENST00000640219 KCNJ6P48051 423 aa16.28■□□□□ 0.2
HLA-C-210ENST00000640219 POTEBQ6S5H4 581 aa16.28■□□□□ 0.2
HLA-C-210ENST00000640219 ZBED2Q9BTP6 218 aa16.28■□□□□ 0.2
HLA-C-210ENST00000640219 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.28■□□□□ 0.2
HLA-C-210ENST00000640219 SUGCTQ9HAC7 445 aa16.28■□□□□ 0.2
HLA-C-210ENST00000640219 MTUS1Q9ULD2 1270 aa16.28■□□□□ 0.2
HLA-C-210ENST00000640219 M0R2C6 588 aa16.27■□□□□ 0.2
HLA-C-210ENST00000640219 OAZ1P54368 228 aa16.27■□□□□ 0.2
HLA-C-210ENST00000640219 PUS10Q3MIT2 529 aaKnown RBP16.27■□□□□ 0.2
HLA-C-210ENST00000640219 TMEM63BQ5T3F8 832 aa16.27■□□□□ 0.2
HLA-C-210ENST00000640219 TAPT1Q6NXT6 567 aa16.27■□□□□ 0.2
HLA-C-210ENST00000640219 EEPD1Q7L9B9 569 aa16.27■□□□□ 0.2
HLA-C-210ENST00000640219 KBTBD3Q8NAB2 608 aa16.27■□□□□ 0.2
HLA-C-210ENST00000640219 OSBP2Q969R2 916 aa16.27■□□□□ 0.2
HLA-C-210ENST00000640219 GPATCH3Q96I76 525 aa16.27■□□□□ 0.2
HLA-C-210ENST00000640219 SEC62Q99442 399 aaKnown RBP16.27■□□□□ 0.2
HLA-C-210ENST00000640219 ACAD9Q9H845 621 aa16.27■□□□□ 0.2
HLA-C-210ENST00000640219 POLR3EQ9NVU0 708 aa16.27■□□□□ 0.2
HLA-C-210ENST00000640219 NYAP2Q9P242 653 aa16.27■□□□□ 0.2
HLA-C-210ENST00000640219 DDX49Q9Y6V7 483 aaKnown RBP16.27■□□□□ 0.2
HLA-C-210ENST00000640219 PITPNM1O00562 1244 aa16.26■□□□□ 0.19
HLA-C-210ENST00000640219 FAM47CQ5HY64 1035 aa16.26■□□□□ 0.19
HLA-C-210ENST00000640219 HFE2Q6ZVN8 426 aa16.26■□□□□ 0.19
HLA-C-210ENST00000640219 TMCO2Q7Z6W1 182 aaPredicted RBP16.26■□□□□ 0.19
HLA-C-210ENST00000640219 STK11IPQ8N1F8 1099 aa16.26■□□□□ 0.19
HLA-C-210ENST00000640219 TGS1Q96RS0 853 aaKnown RBP16.26■□□□□ 0.19
HLA-C-210ENST00000640219 PHOX2BQ99453 314 aa16.26■□□□□ 0.19
HLA-C-210ENST00000640219 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.26■□□□□ 0.19
HLA-C-210ENST00000640219 A1CFQ9NQ94 594 aaKnown RBP16.26■□□□□ 0.19
HLA-C-210ENST00000640219 FEM1BQ9UK73 627 aa16.26■□□□□ 0.19
HLA-C-210ENST00000640219 TTC41PQ6P2S7 1318 aa16.25■□□□□ 0.19
HLA-C-210ENST00000640219 ST18O60284 1047 aa16.25■□□□□ 0.19
HLA-C-210ENST00000640219 MYL3P08590 195 aa16.25■□□□□ 0.19
HLA-C-210ENST00000640219 ERVK-21P61565 698 aa16.25■□□□□ 0.19
HLA-C-210ENST00000640219 WDR5P61964 334 aaKnown RBP16.25■□□□□ 0.19
HLA-C-210ENST00000640219 PURAQ00577 322 aaKnown RBP16.25■□□□□ 0.19
HLA-C-210ENST00000640219 UBE3CQ15386 1083 aa16.25■□□□□ 0.19
HLA-C-210ENST00000640219 KIAA1211Q6ZU35 1233 aa16.25■□□□□ 0.19
HLA-C-210ENST00000640219 FBXO16Q8IX29 292 aaPredicted RBP16.25■□□□□ 0.19
HLA-C-210ENST00000640219 ANKS1AQ92625 1134 aa16.25■□□□□ 0.19
HLA-C-210ENST00000640219 MFSD14AQ96MC6 490 aa16.25■□□□□ 0.19
HLA-C-210ENST00000640219 GPHNQ9NQX3 736 aaPredicted RBP16.25■□□□□ 0.19
HLA-C-210ENST00000640219 CLIP2Q9UDT6 1046 aa16.25■□□□□ 0.19
HLA-C-210ENST00000640219 SLC4A4Q9Y6R1 1079 aa16.25■□□□□ 0.19
HLA-C-210ENST00000640219 BFSP2Q13515 415 aa16.24■□□□□ 0.19
HLA-C-210ENST00000640219 NBPF20Q3BBV1 942 aa16.24■□□□□ 0.19
HLA-C-210ENST00000640219 CTR9Q6PD62 1173 aa16.24■□□□□ 0.19
HLA-C-210ENST00000640219 SMC5Q8IY18 1101 aa16.24■□□□□ 0.19
HLA-C-210ENST00000640219 MTG1Q9BT17 334 aaPredicted RBP16.24■□□□□ 0.19
HLA-C-210ENST00000640219 FSD1Q9BTV5 496 aa16.24■□□□□ 0.19
HLA-C-210ENST00000640219 RNF146Q9NTX7 359 aa16.24■□□□□ 0.19
HLA-C-210ENST00000640219 RNF113AO15541 343 aaKnown RBP16.23■□□□□ 0.19
HLA-C-210ENST00000640219 FDX1P10109 184 aa16.23■□□□□ 0.19
HLA-C-210ENST00000640219 CPT1AP50416 773 aa16.23■□□□□ 0.19
HLA-C-210ENST00000640219 PDE1AP54750 535 aa16.23■□□□□ 0.19
HLA-C-210ENST00000640219 DUSP28Q4G0W2 176 aa16.23■□□□□ 0.19
HLA-C-210ENST00000640219 NEK9Q8TD19 979 aa16.23■□□□□ 0.19
HLA-C-210ENST00000640219 PPP1R13LQ8WUF5 828 aa16.23■□□□□ 0.19
HLA-C-210ENST00000640219 RAD9AQ99638 391 aa16.23■□□□□ 0.19
HLA-C-210ENST00000640219 RWDD1Q9H446 243 aaPredicted RBP16.23■□□□□ 0.19
HLA-C-210ENST00000640219 VTA1Q9NP79 307 aa16.23■□□□□ 0.19
HLA-C-210ENST00000640219 DAXXQ9UER7 740 aaPredicted RBP16.23■□□□□ 0.19
HLA-C-210ENST00000640219 LINC01553A4QN01 128 aa16.22■□□□□ 0.19
HLA-C-210ENST00000640219 H3BQ06 376 aaPredicted RBP16.22■□□□□ 0.19
HLA-C-210ENST00000640219 RASA1P20936 1047 aa16.22■□□□□ 0.19
HLA-C-210ENST00000640219 DEFB103AP81534 67 aa16.22■□□□□ 0.19
HLA-C-210ENST00000640219 ZP2Q05996 745 aa16.22■□□□□ 0.19
HLA-C-210ENST00000640219 STRBPQ96SI9 672 aaKnown RBP16.22■□□□□ 0.19
HLA-C-210ENST00000640219 UPF3BQ9BZI7 483 aaKnown RBP16.22■□□□□ 0.19
HLA-C-210ENST00000640219 EPB41L4AQ9HCS5 686 aaPredicted RBP16.22■□□□□ 0.19
HLA-C-210ENST00000640219 PRKAG3Q9UGI9 489 aa16.22■□□□□ 0.19
HLA-C-210ENST00000640219 NOD1Q9Y239 953 aa16.22■□□□□ 0.19
HLA-C-210ENST00000640219 FAM50BQ9Y247 325 aa16.22■□□□□ 0.19
HLA-C-210ENST00000640219 PTPRSQ13332 1948 aa16.21■□□□□ 0.19
HLA-C-210ENST00000640219 TANC1Q9C0D5 1861 aa16.21■□□□□ 0.19
HLA-C-210ENST00000640219 GPAA1O43292 621 aa16.21■□□□□ 0.19
HLA-C-210ENST00000640219 GJB5O95377 273 aa16.21■□□□□ 0.19
HLA-C-210ENST00000640219 LRRFIP1Q32MZ4 808 aaKnown RBP16.21■□□□□ 0.19
HLA-C-210ENST00000640219 TKFCQ3LXA3 575 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms