RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 H2AFVQ71UI9 128 aa16.1■□□□□ 0.17
HNRNPU-226ENST00000640218 SCYL1Q96KG9 808 aa16.1■□□□□ 0.17
HNRNPU-226ENST00000640218 HINFPQ9BQA5 517 aa16.1■□□□□ 0.17
HNRNPU-226ENST00000640218 AMNQ9BXJ7 453 aa16.1■□□□□ 0.17
HNRNPU-226ENST00000640218 COPB1P53618 953 aaKnown RBP16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 KRT27Q7Z3Y8 459 aa16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 KSR1Q8IVT5 923 aa16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 SMAP1Q8IYB5 467 aaPredicted RBP16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 FBXO18Q8NFZ0 1043 aa16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 MICAL1Q8TDZ2 1067 aa16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 NAA35Q5VZE5 725 aa16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 ZNF277Q9NRM2 450 aaPredicted RBP16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 FAM135BQ49AJ0 1406 aa16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 FOSP01100 380 aaPredicted RBP16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 SAT1P21673 171 aa16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 MAP4K1Q92918 833 aa16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 ZNF577Q9BSK1 485 aa16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 PCDHA4Q9UN74 947 aa16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 TTC36A6NLP5 189 aa16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 SEMA3EO15041 775 aa16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 PPFIA4O75335 1185 aa16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 BFSP1Q12934 665 aa16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 PPP2R5EQ16537 467 aa16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 MIPOL1Q8TD10 442 aa16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 PRPF31Q8WWY3 499 aaKnown RBP16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 CHAMP1Q96JM3 812 aa16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 LEMD3Q9Y2U8 911 aa16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 EPN1Q9Y6I3 576 aaPredicted RBP16.09■□□□□ 0.17
HNRNPU-226ENST00000640218 POLR2BP30876 1174 aaKnown RBP16.08■□□□□ 0.17
HNRNPU-226ENST00000640218 RASSF7Q02833 373 aa16.08■□□□□ 0.17
HNRNPU-226ENST00000640218 C4orf50Q6ZRC1 276 aa16.08■□□□□ 0.17
HNRNPU-226ENST00000640218 PDZD4Q76G19 769 aaPredicted RBP16.08■□□□□ 0.17
HNRNPU-226ENST00000640218 ANKRD13CQ8N6S4 541 aa16.08■□□□□ 0.17
HNRNPU-226ENST00000640218 KIF21AQ7Z4S6 1674 aa16.08■□□□□ 0.17
HNRNPU-226ENST00000640218 A0A1B0GUA9 196 aa16.08■□□□□ 0.17
HNRNPU-226ENST00000640218 RNF8O76064 485 aa16.08■□□□□ 0.17
HNRNPU-226ENST00000640218 ATP1A2P50993 1020 aa16.08■□□□□ 0.17
HNRNPU-226ENST00000640218 ASPRV1Q53RT3 343 aa16.08■□□□□ 0.17
HNRNPU-226ENST00000640218 SH2D4BQ5SQS7 431 aa16.08■□□□□ 0.17
HNRNPU-226ENST00000640218 NLGN1Q8N2Q7 840 aa16.08■□□□□ 0.17
HNRNPU-226ENST00000640218 CACYBPQ9HB71 228 aaKnown RBP16.08■□□□□ 0.17
HNRNPU-226ENST00000640218 SEC31BQ9NQW1 1179 aa16.08■□□□□ 0.17
HNRNPU-226ENST00000640218 ZNF148Q9UQR1 794 aa16.08■□□□□ 0.17
HNRNPU-226ENST00000640218 FMNL1O95466 1100 aaPredicted RBP16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 TTLL1O95922 423 aa16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 ATF2P15336 505 aa16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 NSFP46459 744 aaKnown RBP16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 GNGT1P63211 74 aa16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 Q3C1V9 767 aa16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 TTBK2Q6IQ55 1244 aa16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 ZBED2Q9BTP6 218 aa16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 BCL2L12Q9HB09 334 aa16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 PCDHB4Q9Y5E5 795 aa16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 UNC5CLQ8IV45 518 aa16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 MIS12Q9H081 205 aa16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 HAUS4Q9H6D7 363 aa16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 ZBTB1Q9Y2K1 713 aa16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 TCP1P17987 556 aaKnown RBP16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 MAP7Q14244 749 aa16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 PGBD1Q96JS3 809 aa16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 TUBGCP2Q9BSJ2 902 aa16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 TYW1Q9NV66 732 aaKnown RBP16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 CARMIL3Q8ND23 1372 aa16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 HNRNPDLO14979 420 aaKnown RBP16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 ERFEQ4G0M1 354 aa16.08■□□□□ 0.16
HNRNPU-226ENST00000640218 TLR3O15455 904 aaKnown RBP16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 SLC16A2P36021 539 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 DIXDC1Q155Q3 683 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 AOC3Q16853 763 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 ZNF589Q86UQ0 364 aaPredicted RBP16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 CEP120Q8N960 986 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 LARP4BQ92615 738 aaKnown RBP16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 FOXP1Q9H334 677 aaPredicted RBP16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 PNMA2Q9UL42 364 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 RASSF2P50749 326 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 GPATCH4Q5T3I0 446 aaKnown RBP16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 RASEFQ8IZ41 740 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 RNF10Q8N5U6 811 aaKnown RBP16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 CCDC17Q96LX7 622 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 HOMER3Q9NSC5 361 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 PTK2Q05397 1052 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 EHHADHQ08426 723 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 PHLDB2Q86SQ0 1253 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 H7C0C1 242 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 ATP5OP48047 213 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 CLNS1AP54105 237 aaKnown RBP16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 GABPB1Q06547 395 aaPredicted RBP16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 MESDQ14696 234 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 PLCB4Q15147 1175 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 APOA5Q6Q788 366 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 DPP9Q86TI2 863 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 BAIAP2L1Q9UHR4 511 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 AKT3Q9Y243 479 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 PTPN22Q9Y2R2 807 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 PBRM1Q86U86 1689 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 RINT1Q6NUQ1 792 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 TSC1Q92574 1164 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 RPS6KC1Q96S38 1066 aa16.07■□□□□ 0.16
HNRNPU-226ENST00000640218 DBNDD1Q9H9R9 158 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms