RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-233	ENST00000640039	SEPT4	O43236	478 aa		18.33	■□□□□ 0.52
SPIN3-233	ENST00000640039	METAP2	P50579	478 aa	Known RBP eCLIP	18.33	■□□□□ 0.52
SPIN3-233	ENST00000640039	PPP2R5B	Q15173	497 aa		18.33	■□□□□ 0.52
SPIN3-233	ENST00000640039	C8orf34	Q49A92	452 aa		18.33	■□□□□ 0.52
SPIN3-233	ENST00000640039	PRAMEF19	Q5SWL8	479 aa		18.33	■□□□□ 0.52
SPIN3-233	ENST00000640039	ARMCX2	Q7L311	632 aa		18.33	■□□□□ 0.52
SPIN3-233	ENST00000640039	CMTR1	Q8N1G2	835 aa	Known RBP	18.33	■□□□□ 0.52
SPIN3-233	ENST00000640039	CCDC82	Q8N4S0	544 aa		18.33	■□□□□ 0.52
SPIN3-233	ENST00000640039	TRPV1	Q8NER1	839 aa		18.33	■□□□□ 0.52
SPIN3-233	ENST00000640039	FGD4	Q96M96	766 aa		18.33	■□□□□ 0.52
SPIN3-233	ENST00000640039	AGXT2	Q9BYV1	514 aa		18.33	■□□□□ 0.52
SPIN3-233	ENST00000640039	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	18.33	■□□□□ 0.52
SPIN3-233	ENST00000640039	ZHX1	Q9UKY1	873 aa	Predicted RBP	18.33	■□□□□ 0.52
SPIN3-233	ENST00000640039	SOWAHB	A6NEL2	793 aa		18.32	■□□□□ 0.52
SPIN3-233	ENST00000640039	PPP1R11	O60927	126 aa	Predicted RBP	18.32	■□□□□ 0.52
SPIN3-233	ENST00000640039	SEC24B	O95487	1268 aa		18.32	■□□□□ 0.52
SPIN3-233	ENST00000640039	UBE2Q1	Q7Z7E8	422 aa		18.32	■□□□□ 0.52
SPIN3-233	ENST00000640039	CRISPLD2	Q9H0B8	497 aa		18.32	■□□□□ 0.52
SPIN3-233	ENST00000640039	ABHD16B	Q9H3Z7	469 aa		18.32	■□□□□ 0.52
SPIN3-233	ENST00000640039	PDRG1	Q9NUG6	133 aa		18.32	■□□□□ 0.52
SPIN3-233	ENST00000640039	MCM3AP	O60318	1980 aa		18.31	■□□□□ 0.52
SPIN3-233	ENST00000640039	LOC102724159	A0A0B4J2E5	919 aa		18.31	■□□□□ 0.52
SPIN3-233	ENST00000640039		B4DLN1	442 aa		18.31	■□□□□ 0.52
SPIN3-233	ENST00000640039	FARP2	O94887	1054 aa	Predicted RBP	18.31	■□□□□ 0.52
SPIN3-233	ENST00000640039	SNAI1	O95863	264 aa	Predicted RBP	18.31	■□□□□ 0.52
SPIN3-233	ENST00000640039	CFB	P00751	764 aa		18.31	■□□□□ 0.52
SPIN3-233	ENST00000640039	AKR1A1	P14550	325 aa		18.31	■□□□□ 0.52
SPIN3-233	ENST00000640039	ALDH5A1	P51649	535 aa	Predicted RBP	18.31	■□□□□ 0.52
SPIN3-233	ENST00000640039	MRPL12	P52815	198 aa	Known RBP	18.31	■□□□□ 0.52
SPIN3-233	ENST00000640039	PWP2	Q15269	919 aa	Known RBP	18.31	■□□□□ 0.52
SPIN3-233	ENST00000640039	LCT	P09848	1927 aa		18.3	■□□□□ 0.52
SPIN3-233	ENST00000640039	ACVR2B	Q13705	512 aa		18.3	■□□□□ 0.52
SPIN3-233	ENST00000640039	LHX8	Q68G74	356 aa		18.3	■□□□□ 0.52
SPIN3-233	ENST00000640039	SAMD3	Q8N6K7	520 aa		18.3	■□□□□ 0.52
SPIN3-233	ENST00000640039	ANKLE1	Q8NAG6	615 aa		18.3	■□□□□ 0.52
SPIN3-233	ENST00000640039	DNER	Q8NFT8	737 aa		18.3	■□□□□ 0.52
SPIN3-233	ENST00000640039	PURB	Q96QR8	312 aa	Known RBP	18.3	■□□□□ 0.52
SPIN3-233	ENST00000640039	OGDHL	Q9ULD0	1010 aa		18.3	■□□□□ 0.52
SPIN3-233	ENST00000640039	CNTNAP5	Q8WYK1	1306 aa		18.29	■□□□□ 0.52
SPIN3-233	ENST00000640039	FRMPD3	Q5JV73	1810 aa		18.29	■□□□□ 0.52
SPIN3-233	ENST00000640039	ZNF865	P0CJ78	1059 aa	Predicted RBP	18.29	■□□□□ 0.52
SPIN3-233	ENST00000640039	RARB	P10826	455 aa		18.29	■□□□□ 0.52
SPIN3-233	ENST00000640039	TOB2	Q14106	344 aa	Predicted RBP	18.29	■□□□□ 0.52
SPIN3-233	ENST00000640039	ANO1	Q5XXA6	986 aa		18.29	■□□□□ 0.52
SPIN3-233	ENST00000640039	TBC1D5	Q92609	795 aa		18.29	■□□□□ 0.52
SPIN3-233	ENST00000640039	MAP3K20	Q9NYL2	800 aa	Known RBP	18.29	■□□□□ 0.52
SPIN3-233	ENST00000640039	FAM184B	Q9ULE4	1060 aa		18.29	■□□□□ 0.52
SPIN3-233	ENST00000640039	COLQ	Q9Y215	455 aa	Predicted RBP	18.29	■□□□□ 0.52
SPIN3-233	ENST00000640039	TRIOBP	Q9H2D6	2365 aa		18.28	■□□□□ 0.52
SPIN3-233	ENST00000640039	ASTN1	O14525	1302 aa		18.28	■□□□□ 0.52
SPIN3-233	ENST00000640039		H0YGN5	161 aa		18.28	■□□□□ 0.52
SPIN3-233	ENST00000640039	GCOM1	H8Y6P7	765 aa	Predicted RBP	18.28	■□□□□ 0.52
SPIN3-233	ENST00000640039	POLR2M	P0CAP2	368 aa		18.28	■□□□□ 0.52
SPIN3-233	ENST00000640039	CDC27	P30260	824 aa		18.28	■□□□□ 0.52
SPIN3-233	ENST00000640039	FXR1	P51114	621 aa	Known RBP eCLIP	18.28	■□□□□ 0.52
SPIN3-233	ENST00000640039	PDE4D	Q08499	809 aa		18.28	■□□□□ 0.52
SPIN3-233	ENST00000640039	SYTL5	Q8TDW5	730 aa	Predicted RBP	18.28	■□□□□ 0.52
SPIN3-233	ENST00000640039	UPF2	Q9HAU5	1272 aa	Known RBP	18.28	■□□□□ 0.52
SPIN3-233	ENST00000640039	NID2	Q14112	1375 aa		18.28	■□□□□ 0.52
SPIN3-233	ENST00000640039	hCG_1642624	A0A1W2PR95	340 aa		18.27	■□□□□ 0.52
SPIN3-233	ENST00000640039	OPLAH	O14841	1288 aa		18.27	■□□□□ 0.52
SPIN3-233	ENST00000640039	PDIA3	P30101	505 aa	Known RBP	18.27	■□□□□ 0.52
SPIN3-233	ENST00000640039	ADD1	P35611	737 aa	Known RBP	18.27	■□□□□ 0.52
SPIN3-233	ENST00000640039	HSD17B4	P51659	736 aa		18.27	■□□□□ 0.52
SPIN3-233	ENST00000640039	EVC	P57679	992 aa		18.27	■□□□□ 0.52
SPIN3-233	ENST00000640039	ANKRD1	Q15327	319 aa		18.27	■□□□□ 0.52
SPIN3-233	ENST00000640039	ARHGEF16	Q5VV41	709 aa		18.27	■□□□□ 0.52
SPIN3-233	ENST00000640039	EEPD1	Q7L9B9	569 aa		18.27	■□□□□ 0.52
SPIN3-233	ENST00000640039	HEATR3	Q7Z4Q2	680 aa		18.27	■□□□□ 0.52
SPIN3-233	ENST00000640039	ARRDC4	Q8NCT1	418 aa		18.27	■□□□□ 0.52
SPIN3-233	ENST00000640039	MORC4	Q8TE76	937 aa		18.27	■□□□□ 0.52
SPIN3-233	ENST00000640039	NSUN6	Q8TEA1	469 aa	Known RBP	18.27	■□□□□ 0.52
SPIN3-233	ENST00000640039	CUL5	Q93034	780 aa		18.27	■□□□□ 0.52
SPIN3-233	ENST00000640039	IL17RA	Q96F46	866 aa		18.27	■□□□□ 0.52
SPIN3-233	ENST00000640039	RMDN3	Q96TC7	470 aa		18.27	■□□□□ 0.52
SPIN3-233	ENST00000640039	VTA1	Q9NP79	307 aa		18.27	■□□□□ 0.52
SPIN3-233	ENST00000640039	FAM217B	Q9NTX9	383 aa	Predicted RBP	18.27	■□□□□ 0.52
SPIN3-233	ENST00000640039	MYCN	P04198	464 aa	Predicted RBP	18.26	■□□□□ 0.51
SPIN3-233	ENST00000640039	HOXA13	P31271	388 aa	Predicted RBP	18.26	■□□□□ 0.51
SPIN3-233	ENST00000640039	CCT2	P78371	535 aa	Known RBP	18.26	■□□□□ 0.51
SPIN3-233	ENST00000640039	AKAP17A	Q02040	695 aa	Known RBP	18.26	■□□□□ 0.51
SPIN3-233	ENST00000640039	GHRHR	Q02643	423 aa		18.26	■□□□□ 0.51
SPIN3-233	ENST00000640039	CCDC144B	Q3MJ40	725 aa		18.26	■□□□□ 0.51
SPIN3-233	ENST00000640039	NOL8	Q76FK4	1167 aa	Known RBP	18.26	■□□□□ 0.51
SPIN3-233	ENST00000640039	NECAB2	Q7Z6G3	386 aa		18.26	■□□□□ 0.51
SPIN3-233	ENST00000640039	FBXO16	Q8IX29	292 aa	Predicted RBP	18.26	■□□□□ 0.51
SPIN3-233	ENST00000640039	ZNF274	Q96GC6	653 aa	Predicted RBP	18.26	■□□□□ 0.51
SPIN3-233	ENST00000640039	TAAR1	Q96RJ0	339 aa		18.26	■□□□□ 0.51
SPIN3-233	ENST00000640039	XPNPEP3	Q9NQH7	507 aa		18.26	■□□□□ 0.51
SPIN3-233	ENST00000640039	COL20A1	Q9P218	1284 aa		18.26	■□□□□ 0.51
SPIN3-233	ENST00000640039	RBM27	Q9P2N5	1060 aa	Known RBP	18.26	■□□□□ 0.51
SPIN3-233	ENST00000640039		V9GY48	417 aa	Predicted RBP	18.26	■□□□□ 0.51
SPIN3-233	ENST00000640039	FUT2	Q10981	343 aa		18.25	■□□□□ 0.51
SPIN3-233	ENST00000640039	FCHSD1	Q86WN1	690 aa		18.25	■□□□□ 0.51
SPIN3-233	ENST00000640039	SMARCC2	Q8TAQ2	1214 aa		18.25	■□□□□ 0.51
SPIN3-233	ENST00000640039	PAWR	Q96IZ0	340 aa	Known RBP	18.25	■□□□□ 0.51
SPIN3-233	ENST00000640039	IWS1	Q96ST2	819 aa		18.25	■□□□□ 0.51
SPIN3-233	ENST00000640039	LARP6	Q9BRS8	491 aa	Known RBP	18.25	■□□□□ 0.51
SPIN3-233	ENST00000640039	KATNBL1	Q9H079	304 aa		18.25	■□□□□ 0.51
SPIN3-233	ENST00000640039	SPC25	Q9HBM1	224 aa		18.25	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms