RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 ZNF622Q969S3 477 aaKnown RBP eCLIP9.66□□□□□ -0.86
NECAP1-218ENST00000639595 CCDC47Q96A33 483 aaKnown RBP9.66□□□□□ -0.86
NECAP1-218ENST00000639595 CALML4Q96GE6 196 aa9.66□□□□□ -0.86
NECAP1-218ENST00000639595 GLT8D2Q9H1C3 349 aa9.66□□□□□ -0.86
NECAP1-218ENST00000639595 VPS16Q9H269 839 aa9.66□□□□□ -0.86
NECAP1-218ENST00000639595 KANSL2Q9H9L4 492 aa9.66□□□□□ -0.86
NECAP1-218ENST00000639595 DBNDD1Q9H9R9 158 aa9.66□□□□□ -0.86
NECAP1-218ENST00000639595 FAM198AQ9UFP1 575 aa9.66□□□□□ -0.86
NECAP1-218ENST00000639595 ATF5Q9Y2D1 282 aaPredicted RBP9.66□□□□□ -0.86
NECAP1-218ENST00000639595 PVALEFA0A1B0GWK0 134 aa9.65□□□□□ -0.86
NECAP1-218ENST00000639595 SOWAHDA6NJG2 315 aa9.65□□□□□ -0.86
NECAP1-218ENST00000639595 LGALS16A8MUM7 142 aa9.65□□□□□ -0.86
NECAP1-218ENST00000639595 H0YIN7 160 aa9.65□□□□□ -0.86
NECAP1-218ENST00000639595 SLC37A4O43826 429 aa9.65□□□□□ -0.86
NECAP1-218ENST00000639595 TPM1P09493 284 aa9.65□□□□□ -0.86
NECAP1-218ENST00000639595 CCNE1P24864 410 aa9.65□□□□□ -0.86
NECAP1-218ENST00000639595 TXKP42681 527 aa9.65□□□□□ -0.86
NECAP1-218ENST00000639595 ZNF772Q68DY9 489 aaPredicted RBP9.65□□□□□ -0.86
NECAP1-218ENST00000639595 CUL5Q93034 780 aa9.65□□□□□ -0.86
NECAP1-218ENST00000639595 FEZ1Q99689 392 aa9.65□□□□□ -0.86
NECAP1-218ENST00000639595 DUSP9Q99956 384 aaKnown RBP9.65□□□□□ -0.86
NECAP1-218ENST00000639595 RAB34Q9BZG1 259 aa9.65□□□□□ -0.86
NECAP1-218ENST00000639595 BLOC1S4Q9NUP1 217 aa9.65□□□□□ -0.86
NECAP1-218ENST00000639595 TAB2Q9NYJ8 693 aa9.65□□□□□ -0.86
NECAP1-218ENST00000639595 LRWD1Q9UFC0 647 aa9.65□□□□□ -0.86
NECAP1-218ENST00000639595 BICDL2A1A5D9 508 aa9.65□□□□□ -0.87
NECAP1-218ENST00000639595 TRIM49BA6NDI0 452 aa9.65□□□□□ -0.87
NECAP1-218ENST00000639595 TDP2O95551 362 aa9.65□□□□□ -0.87
NECAP1-218ENST00000639595 GCFC2P16383 781 aaKnown RBP9.65□□□□□ -0.87
NECAP1-218ENST00000639595 MAP3K9P80192 1104 aa9.65□□□□□ -0.87
NECAP1-218ENST00000639595 STK4Q13043 487 aa9.65□□□□□ -0.87
NECAP1-218ENST00000639595 MTF1Q14872 753 aa9.65□□□□□ -0.87
NECAP1-218ENST00000639595 TMEM266Q2M3C6 531 aa9.65□□□□□ -0.87
NECAP1-218ENST00000639595 SV2BQ7L1I2 683 aa9.65□□□□□ -0.87
NECAP1-218ENST00000639595 SH3BP5LQ7L8J4 393 aa9.65□□□□□ -0.87
NECAP1-218ENST00000639595 SIAH1Q8IUQ4 282 aa9.65□□□□□ -0.87
NECAP1-218ENST00000639595 MB21D1Q8N884 522 aa9.65□□□□□ -0.87
NECAP1-218ENST00000639595 DCAF4Q8WV16 495 aa9.65□□□□□ -0.87
NECAP1-218ENST00000639595 CPLX3Q8WVH0 158 aa9.65□□□□□ -0.87
NECAP1-218ENST00000639595 PNMA5Q96PV4 448 aa9.65□□□□□ -0.87
NECAP1-218ENST00000639595 PSTPIP2Q9H939 334 aa9.65□□□□□ -0.87
NECAP1-218ENST00000639595 ABHD10Q9NUJ1 306 aa9.65□□□□□ -0.87
NECAP1-218ENST00000639595 EXOC1Q9NV70 894 aa9.65□□□□□ -0.87
NECAP1-218ENST00000639595 GREB1LQ9C091 1923 aaPredicted RBP9.64□□□□□ -0.87
NECAP1-218ENST00000639595 DDTLA6NHG4 134 aaPredicted RBP9.64□□□□□ -0.87
NECAP1-218ENST00000639595 USP17L10C9JJH3 530 aa9.64□□□□□ -0.87
NECAP1-218ENST00000639595 RNF225M0QZC1 329 aaPredicted RBP9.64□□□□□ -0.87
NECAP1-218ENST00000639595 ECE2O60344 883 aa9.64□□□□□ -0.87
NECAP1-218ENST00000639595 GNG11P61952 73 aa9.64□□□□□ -0.87
NECAP1-218ENST00000639595 UBXN1Q04323 297 aa9.64□□□□□ -0.87
NECAP1-218ENST00000639595 PDE4DQ08499 809 aa9.64□□□□□ -0.87
NECAP1-218ENST00000639595 CERKLQ49MI3 558 aaPredicted RBP9.64□□□□□ -0.87
NECAP1-218ENST00000639595 KIAA0825Q8IV33 1275 aa9.64□□□□□ -0.87
NECAP1-218ENST00000639595 P2RX5Q93086 422 aa9.64□□□□□ -0.87
NECAP1-218ENST00000639595 KIFC2Q96AC6 838 aa9.64□□□□□ -0.87
NECAP1-218ENST00000639595 WDR24Q96S15 920 aa9.64□□□□□ -0.87
NECAP1-218ENST00000639595 NAP1L4Q99733 375 aaKnown RBP9.64□□□□□ -0.87
NECAP1-218ENST00000639595 MRPL44Q9H9J2 332 aaKnown RBP9.64□□□□□ -0.87
NECAP1-218ENST00000639595 MPHOSPH10O00566 681 aaKnown RBP9.64□□□□□ -0.87
NECAP1-218ENST00000639595 EEF2P13639 858 aaKnown RBP9.64□□□□□ -0.87
NECAP1-218ENST00000639595 SLC16A2P36021 539 aa9.64□□□□□ -0.87
NECAP1-218ENST00000639595 ASIC1P78348 528 aa9.64□□□□□ -0.87
NECAP1-218ENST00000639595 TMEM119Q4V9L6 283 aa9.64□□□□□ -0.87
NECAP1-218ENST00000639595 CENPPQ6IPU0 288 aa9.64□□□□□ -0.87
NECAP1-218ENST00000639595 FOXR2Q6PJQ5 311 aa9.64□□□□□ -0.87
NECAP1-218ENST00000639595 KCTD1Q719H9 257 aa9.64□□□□□ -0.87
NECAP1-218ENST00000639595 HAS1Q92839 578 aa9.64□□□□□ -0.87
NECAP1-218ENST00000639595 CNKSR1Q969H4 720 aa9.64□□□□□ -0.87
NECAP1-218ENST00000639595 DESI2Q9BSY9 194 aa9.64□□□□□ -0.87
NECAP1-218ENST00000639595 CYP3A7-CYP3A51PA0A087WV96 503 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 MYMKA6NI61 221 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 SLC26A4O43511 780 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 CYP3A7P24462 503 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 CASQ1P31415 396 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 DNM2P50570 870 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 USP11P51784 963 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 EHHADHQ08426 723 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 CCDC96Q2M329 555 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 HYIQ5T013 277 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 ANKRD40Q6AI12 368 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 CC2D2BQ6DHV5 1058 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 CYP26C1Q6V0L0 522 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 UNC13DQ70J99 1090 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 CSGALNACT2Q8N6G5 542 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 ZNF397Q8NF99 534 aaPredicted RBP9.63□□□□□ -0.87
NECAP1-218ENST00000639595 LARP4BQ92615 738 aaKnown RBP9.63□□□□□ -0.87
NECAP1-218ENST00000639595 TRIM47Q96LD4 638 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 LRRC27Q9C0I9 530 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 PCDHAC2Q9Y5I4 1007 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 COL11A2P13942 1736 aaPredicted RBP9.63□□□□□ -0.87
NECAP1-218ENST00000639595 ATRNL1Q5VV63 1379 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 ENTPD3O75355 529 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 URI1O94763 535 aaPredicted RBP9.63□□□□□ -0.87
NECAP1-218ENST00000639595 SLURP2P0DP57 97 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 KRT9P35527 623 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 SLC1A4P43007 532 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 TNNI2P48788 182 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 ERVK-24P63145 666 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 ELF2Q15723 593 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 UBE2SQ16763 222 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms