RNA–Protein interactions for RNA: ENST00000638298.1

RTTN-212, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 892 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-212ENST00000638298 PBXIP1Q96AQ6 731 aa9.44□□□□□ -0.9
RTTN-212ENST00000638298 OSMRQ99650 979 aa9.44□□□□□ -0.9
RTTN-212ENST00000638298 BHLHE41Q9C0J9 482 aaPredicted RBP9.44□□□□□ -0.9
RTTN-212ENST00000638298 CCDC39Q9UFE4 941 aa9.44□□□□□ -0.9
RTTN-212ENST00000638298 PTCH2Q9Y6C5 1203 aa9.44□□□□□ -0.9
RTTN-212ENST00000638298 COL4A1P02462 1669 aa9.44□□□□□ -0.9
RTTN-212ENST00000638298 ANKRD36CQ5JPF3 1778 aa9.44□□□□□ -0.9
RTTN-212ENST00000638298 SCN9AQ15858 1988 aa9.44□□□□□ -0.9
RTTN-212ENST00000638298 INHBEP58166 350 aa9.43□□□□□ -0.9
RTTN-212ENST00000638298 CAP1Q01518 475 aa9.43□□□□□ -0.9
RTTN-212ENST00000638298 SF3B3Q15393 1217 aaKnown RBP9.43□□□□□ -0.9
RTTN-212ENST00000638298 OTUD7BQ6GQQ9 843 aa9.43□□□□□ -0.9
RTTN-212ENST00000638298 CBLL1Q75N03 491 aa9.43□□□□□ -0.9
RTTN-212ENST00000638298 VSIG10LQ86VR7 867 aa9.43□□□□□ -0.9
RTTN-212ENST00000638298 C12orf50Q8NA57 414 aaPredicted RBP9.43□□□□□ -0.9
RTTN-212ENST00000638298 JARID2Q92833 1246 aaPredicted RBP9.43□□□□□ -0.9
RTTN-212ENST00000638298 WNK4Q96J92 1243 aa9.43□□□□□ -0.9
RTTN-212ENST00000638298 ZNF333Q96JL9 665 aa9.43□□□□□ -0.9
RTTN-212ENST00000638298 GMLQ99445 158 aa9.43□□□□□ -0.9
RTTN-212ENST00000638298 ZKSCAN3Q9BRR0 538 aa9.43□□□□□ -0.9
RTTN-212ENST00000638298 KIAA0100Q14667 2235 aaKnown RBP9.43□□□□□ -0.9
RTTN-212ENST00000638298 LRRC37AA6NMS7 1700 aa9.42□□□□□ -0.9
RTTN-212ENST00000638298 ZNF609O15014 1411 aa9.42□□□□□ -0.9
RTTN-212ENST00000638298 ARID1BQ8NFD5 2236 aaPredicted RBP9.42□□□□□ -0.9
RTTN-212ENST00000638298 FAM95CA0A1B0GW59 222 aa9.42□□□□□ -0.9
RTTN-212ENST00000638298 EDN3P14138 238 aa9.42□□□□□ -0.9
RTTN-212ENST00000638298 FZD5Q13467 585 aa9.42□□□□□ -0.9
RTTN-212ENST00000638298 C8orf34Q49A92 452 aa9.42□□□□□ -0.9
RTTN-212ENST00000638298 EXOSC6Q5RKV6 272 aaKnown RBP9.42□□□□□ -0.9
RTTN-212ENST00000638298 LDLRAD1Q5T700 205 aa9.42□□□□□ -0.9
RTTN-212ENST00000638298 PAOXQ6QHF9 649 aa9.42□□□□□ -0.9
RTTN-212ENST00000638298 FBXL6Q8N531 539 aa9.42□□□□□ -0.9
RTTN-212ENST00000638298 FBXL18Q96ME1 805 aa9.42□□□□□ -0.9
RTTN-212ENST00000638298 USP26Q9BXU7 913 aa9.42□□□□□ -0.9
RTTN-212ENST00000638298 KDM3BQ7LBC6 1761 aa9.42□□□□□ -0.9
RTTN-212ENST00000638298 DDX60Q8IY21 1712 aaKnown RBP9.42□□□□□ -0.9
RTTN-212ENST00000638298 PPP2R1AP30153 589 aa9.41□□□□□ -0.9
RTTN-212ENST00000638298 EIF1AXP47813 144 aaKnown RBP9.41□□□□□ -0.9
RTTN-212ENST00000638298 APOBEC3FQ8IUX4 373 aaKnown RBP9.41□□□□□ -0.9
RTTN-212ENST00000638298 KIAA0825Q8IV33 1275 aa9.41□□□□□ -0.9
RTTN-212ENST00000638298 PODXL2Q9NZ53 605 aa9.41□□□□□ -0.9
RTTN-212ENST00000638298 CHPF2Q9P2E5 772 aa9.41□□□□□ -0.9
RTTN-212ENST00000638298 MKI67P46013 3256 aaKnown RBP9.41□□□□□ -0.9
RTTN-212ENST00000638298 MAPK8IP3Q9UPT6 1336 aa9.4□□□□□ -0.9
RTTN-212ENST00000638298 A6NHS1 94 aa9.4□□□□□ -0.9
RTTN-212ENST00000638298 DLGAP3O95886 979 aa9.4□□□□□ -0.9
RTTN-212ENST00000638298 ARHGEF6Q15052 776 aa9.4□□□□□ -0.9
RTTN-212ENST00000638298 NFE2L2Q16236 605 aa9.4□□□□□ -0.9
RTTN-212ENST00000638298 KRT24Q2M2I5 525 aa9.4□□□□□ -0.9
RTTN-212ENST00000638298 DACT2Q5SW24 774 aa9.4□□□□□ -0.9
RTTN-212ENST00000638298 ALKBH2Q6NS38 261 aa9.4□□□□□ -0.9
RTTN-212ENST00000638298 NFXL1Q6ZNB6 911 aa9.4□□□□□ -0.9
RTTN-212ENST00000638298 SNX29Q8TEQ0 813 aa9.4□□□□□ -0.9
RTTN-212ENST00000638298 EZH1Q92800 747 aaPredicted RBP9.4□□□□□ -0.9
RTTN-212ENST00000638298 DEFB129Q9H1M3 183 aa9.4□□□□□ -0.9
RTTN-212ENST00000638298 LAS1LQ9Y4W2 734 aaKnown RBP9.4□□□□□ -0.9
RTTN-212ENST00000638298 XDHP47989 1333 aa9.39□□□□□ -0.91
RTTN-212ENST00000638298 CLRN2A0PK11 232 aa9.39□□□□□ -0.91
RTTN-212ENST00000638298 EREGO14944 169 aa9.39□□□□□ -0.91
RTTN-212ENST00000638298 ZBTB48P10074 688 aaPredicted RBP9.39□□□□□ -0.91
RTTN-212ENST00000638298 ESRRAP11474 423 aaPredicted RBP9.39□□□□□ -0.91
RTTN-212ENST00000638298 TAF1CQ15572 869 aaPredicted RBP9.39□□□□□ -0.91
RTTN-212ENST00000638298 ANKRD18AQ8IVF6 992 aa9.39□□□□□ -0.91
RTTN-212ENST00000638298 C2CD4AQ8NCU7 369 aaPredicted RBP9.39□□□□□ -0.91
RTTN-212ENST00000638298 PLBD2Q8NHP8 589 aa9.39□□□□□ -0.91
RTTN-212ENST00000638298 PTPN18Q99952 460 aa9.39□□□□□ -0.91
RTTN-212ENST00000638298 ISCA1Q9BUE6 129 aa9.39□□□□□ -0.91
RTTN-212ENST00000638298 YIPF2Q9BWQ6 316 aa9.39□□□□□ -0.91
RTTN-212ENST00000638298 VEZTQ9HBM0 779 aa9.39□□□□□ -0.91
RTTN-212ENST00000638298 CEP290O15078 2479 aa9.39□□□□□ -0.91
RTTN-212ENST00000638298 RBBP6Q7Z6E9 1792 aaKnown RBP9.38□□□□□ -0.91
RTTN-212ENST00000638298 F8W031 263 aaPredicted RBP9.38□□□□□ -0.91
RTTN-212ENST00000638298 PHACTR2O75167 634 aa9.38□□□□□ -0.91
RTTN-212ENST00000638298 TNFRSF21O75509 655 aa9.38□□□□□ -0.91
RTTN-212ENST00000638298 MPSTP25325 297 aa9.38□□□□□ -0.91
RTTN-212ENST00000638298 USP11P51784 963 aa9.38□□□□□ -0.91
RTTN-212ENST00000638298 EHHADHQ08426 723 aa9.38□□□□□ -0.91
RTTN-212ENST00000638298 NFKBIBQ15653 356 aa9.38□□□□□ -0.91
RTTN-212ENST00000638298 CCDC152Q4G0S7 254 aa9.38□□□□□ -0.91
RTTN-212ENST00000638298 ARHGAP39Q9C0H5 1083 aa9.38□□□□□ -0.91
RTTN-212ENST00000638298 NRSN2Q9GZP1 204 aa9.38□□□□□ -0.91
RTTN-212ENST00000638298 ZFYVE28Q9HCC9 887 aa9.38□□□□□ -0.91
RTTN-212ENST00000638298 BSDC1Q9NW68 430 aaPredicted RBP9.38□□□□□ -0.91
RTTN-212ENST00000638298 NPR3P17342 541 aa9.37□□□□□ -0.91
RTTN-212ENST00000638298 SOX4Q06945 474 aaPredicted RBP9.37□□□□□ -0.91
RTTN-212ENST00000638298 KIF22Q14807 665 aa9.37□□□□□ -0.91
RTTN-212ENST00000638298 DLGAP5Q15398 846 aa9.37□□□□□ -0.91
RTTN-212ENST00000638298 LCE1DQ5T752 114 aa9.37□□□□□ -0.91
RTTN-212ENST00000638298 NBPF12Q5TAG4 269 aaPredicted RBP9.37□□□□□ -0.91
RTTN-212ENST00000638298 TTLL5Q6EMB2 1281 aa9.37□□□□□ -0.91
RTTN-212ENST00000638298 CDPF1Q6NVV7 123 aa9.37□□□□□ -0.91
RTTN-212ENST00000638298 ZAR1Q86SH2 424 aa9.37□□□□□ -0.91
RTTN-212ENST00000638298 FBLIM1Q8WUP2 373 aa9.37□□□□□ -0.91
RTTN-212ENST00000638298 OPTNQ96CV9 577 aa9.37□□□□□ -0.91
RTTN-212ENST00000638298 BIN2Q9UBW5 565 aaPredicted RBP9.37□□□□□ -0.91
RTTN-212ENST00000638298 PRKAG2Q9UGJ0 569 aa9.37□□□□□ -0.91
RTTN-212ENST00000638298 PCDHAC2Q9Y5I4 1007 aa9.37□□□□□ -0.91
RTTN-212ENST00000638298 SZT2Q5T011 3432 aa9.37□□□□□ -0.91
RTTN-212ENST00000638298 MYO3BQ8WXR4 1341 aa9.36□□□□□ -0.91
RTTN-212ENST00000638298 CCL15-CCL14A0A0B4J2E2 113 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms