RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 ZNF215Q9UL58 517 aaPredicted RBP24.16■■□□□ 1.46
CLN6-224ENST00000638076 ZNF646O15015 1829 aaPredicted RBP24.15■■□□□ 1.46
CLN6-224ENST00000638076 PSMA7O14818 248 aa24.15■■□□□ 1.46
CLN6-224ENST00000638076 ASIC1P78348 528 aa24.15■■□□□ 1.46
CLN6-224ENST00000638076 AMPD3Q01432 767 aa24.15■■□□□ 1.46
CLN6-224ENST00000638076 SEPT2Q15019 361 aa24.15■■□□□ 1.46
CLN6-224ENST00000638076 SLFN13Q68D06 897 aa24.15■■□□□ 1.46
CLN6-224ENST00000638076 TDRD3Q9H7E2 651 aaKnown RBP24.15■■□□□ 1.46
CLN6-224ENST00000638076 DNAI1Q9UI46 699 aa24.15■■□□□ 1.46
CLN6-224ENST00000638076 MFAP3LO75121 409 aa24.15■■□□□ 1.46
CLN6-224ENST00000638076 CASP14P31944 242 aa24.15■■□□□ 1.46
CLN6-224ENST00000638076 PDE4DQ08499 809 aa24.15■■□□□ 1.46
CLN6-224ENST00000638076 IRF2BP1Q8IU81 584 aa24.15■■□□□ 1.46
CLN6-224ENST00000638076 DCAF4Q8WV16 495 aa24.15■■□□□ 1.46
CLN6-224ENST00000638076 CCDC47Q96A33 483 aaKnown RBP24.15■■□□□ 1.46
CLN6-224ENST00000638076 EXOC1Q9NV70 894 aa24.15■■□□□ 1.46
CLN6-224ENST00000638076 GYPCP04921 128 aa24.14■■□□□ 1.45
CLN6-224ENST00000638076 GRB10Q13322 594 aa24.14■■□□□ 1.45
CLN6-224ENST00000638076 PPP4R3AQ6IN85 833 aa24.14■■□□□ 1.45
CLN6-224ENST00000638076 POTEMA6NI47 508 aa24.13■■□□□ 1.45
CLN6-224ENST00000638076 ICA1Q05084 483 aa24.13■■□□□ 1.45
CLN6-224ENST00000638076 QRICH1Q2TAL8 776 aa24.13■■□□□ 1.45
CLN6-224ENST00000638076 SIAH1Q8IUQ4 282 aa24.13■■□□□ 1.45
CLN6-224ENST00000638076 RAB34Q9BZG1 259 aa24.13■■□□□ 1.45
CLN6-224ENST00000638076 PHLPP2Q6ZVD8 1323 aa24.13■■□□□ 1.45
CLN6-224ENST00000638076 SOWAHDA6NJG2 315 aa24.13■■□□□ 1.45
CLN6-224ENST00000638076 GDF11O95390 407 aa24.13■■□□□ 1.45
CLN6-224ENST00000638076 PDIA5Q14554 519 aa24.13■■□□□ 1.45
CLN6-224ENST00000638076 MTF1Q14872 753 aa24.13■■□□□ 1.45
CLN6-224ENST00000638076 EZH2Q15910 746 aaKnown RBP24.13■■□□□ 1.45
CLN6-224ENST00000638076 TRIM47Q96LD4 638 aa24.13■■□□□ 1.45
CLN6-224ENST00000638076 NAA15Q9BXJ9 866 aaKnown RBP24.13■■□□□ 1.45
CLN6-224ENST00000638076 L2HGDHQ9H9P8 463 aa24.13■■□□□ 1.45
CLN6-224ENST00000638076 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.13■■□□□ 1.452e-8■■■□□ 18
CLN6-224ENST00000638076 FXR1P51114 621 aaKnown RBP eCLIP24.12■■□□□ 1.45
CLN6-224ENST00000638076 TMEM179Q6ZVK1 233 aa24.12■■□□□ 1.45
CLN6-224ENST00000638076 SV2BQ7L1I2 683 aa24.12■■□□□ 1.45
CLN6-224ENST00000638076 CNGA4Q8IV77 575 aa24.12■■□□□ 1.45
CLN6-224ENST00000638076 DHTKD1Q96HY7 919 aaPredicted RBP24.12■■□□□ 1.45
CLN6-224ENST00000638076 CDK5RAP3Q96JB5 506 aa24.12■■□□□ 1.45
CLN6-224ENST00000638076 PNMA5Q96PV4 448 aa24.12■■□□□ 1.45
CLN6-224ENST00000638076 DESI2Q9BSY9 194 aa24.12■■□□□ 1.45
CLN6-224ENST00000638076 SRRTQ9BXP5 876 aaKnown RBP24.12■■□□□ 1.45
CLN6-224ENST00000638076 BLOC1S4Q9NUP1 217 aa24.12■■□□□ 1.45
CLN6-224ENST00000638076 DDX25Q9UHL0 483 aaKnown RBP24.12■■□□□ 1.45
CLN6-224ENST00000638076 GOLGA6L9A6NEM1 432 aa24.12■■□□□ 1.45
CLN6-224ENST00000638076 YDJCA8MPS7 323 aa24.12■■□□□ 1.45
CLN6-224ENST00000638076 PPIP5K2O43314 1243 aa24.12■■□□□ 1.45
CLN6-224ENST00000638076 SLU7O95391 586 aaKnown RBP24.12■■□□□ 1.45
CLN6-224ENST00000638076 TPM1P09493 284 aa24.12■■□□□ 1.45
CLN6-224ENST00000638076 STK4Q13043 487 aa24.12■■□□□ 1.45
CLN6-224ENST00000638076 TTI2Q6NXR4 508 aa24.12■■□□□ 1.45
CLN6-224ENST00000638076 THAP9Q9H5L6 903 aa24.12■■□□□ 1.45
CLN6-224ENST00000638076 FCER1AP12319 257 aa24.11■■□□□ 1.45
CLN6-224ENST00000638076 ABCB5Q2M3G0 1257 aa24.11■■□□□ 1.45
CLN6-224ENST00000638076 STK17AQ9UEE5 414 aa24.11■■□□□ 1.45
CLN6-224ENST00000638076 PCDHA1Q9Y5I3 950 aa24.11■■□□□ 1.45
CLN6-224ENST00000638076 C21orf2O43822 256 aa24.11■■□□□ 1.45
CLN6-224ENST00000638076 UBXN1Q04323 297 aa24.11■■□□□ 1.45
CLN6-224ENST00000638076 CDC37Q16543 378 aaPredicted RBP24.11■■□□□ 1.45
CLN6-224ENST00000638076 PDCL2Q8N4E4 241 aa24.11■■□□□ 1.45
CLN6-224ENST00000638076 SUPT20HQ8NEM7 779 aa24.11■■□□□ 1.45
CLN6-224ENST00000638076 ERO1AQ96HE7 468 aa24.11■■□□□ 1.45
CLN6-224ENST00000638076 PRMT6Q96LA8 375 aaPredicted RBP24.11■■□□□ 1.45
CLN6-224ENST00000638076 ATF5Q9Y2D1 282 aaPredicted RBP24.11■■□□□ 1.45
CLN6-224ENST00000638076 USP17L15C9J2P7 530 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 USP17L13C9JLJ4 530 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 USP17L11C9JVI0 530 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 USP17L18D6R9N7 530 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 USP17L22D6RA61 530 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 USP17L17D6RBQ6 530 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 USP17L19D6RCP7 530 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 USP17L20D6RJB6 530 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 EN1Q05925 392 aaPredicted RBP24.1■■□□□ 1.45
CLN6-224ENST00000638076 USP17L24Q0WX57 530 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 MCM6Q14566 821 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 CC2D2BQ6DHV5 1058 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 USP17L6PQ6QN14 398 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 SNX29Q8TEQ0 813 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 LARP4BQ92615 738 aaKnown RBP24.1■■□□□ 1.45
CLN6-224ENST00000638076 ARID3AQ99856 593 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 STK32BQ9NY57 414 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 RGPD3A6NKT7 1758 aaPredicted RBP24.1■■□□□ 1.45
CLN6-224ENST00000638076 RGPD4Q7Z3J3 1758 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 FANCGO15287 622 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 ENTPD3O75355 529 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 EEF1GP26641 437 aaKnown RBP24.1■■□□□ 1.45
CLN6-224ENST00000638076 CCDC93Q567U6 631 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 KRT79Q5XKE5 535 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 RAD9BQ6WBX8 426 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 HAS1Q92839 578 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 CCDC51Q96ER9 411 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 NUDT12Q9BQG2 462 aa24.1■■□□□ 1.45
CLN6-224ENST00000638076 F5H6K3 240 aa24.09■■□□□ 1.45
CLN6-224ENST00000638076 CCNE1P24864 410 aa24.09■■□□□ 1.45
CLN6-224ENST00000638076 KLRC3Q07444 240 aa24.09■■□□□ 1.45
CLN6-224ENST00000638076 P2RX5Q93086 422 aa24.09■■□□□ 1.45
CLN6-224ENST00000638076 DUSP9Q99956 384 aaKnown RBP24.09■■□□□ 1.45
CLN6-224ENST00000638076 GLT8D2Q9H1C3 349 aa24.09■■□□□ 1.45
CLN6-224ENST00000638076 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms