RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 ARMCX6Q7L4S7 300 aa10.57□□□□□ -0.72
CACNA1A-242ENST00000637485 ZC3H12CQ9C0D7 883 aaKnown RBP10.57□□□□□ -0.72
CACNA1A-242ENST00000637485 DPH5Q9H2P9 285 aa10.57□□□□□ -0.72
CACNA1A-242ENST00000637485 CHD1O14646 1710 aa10.57□□□□□ -0.72
CACNA1A-242ENST00000637485 WBP4O75554 376 aaKnown RBP10.57□□□□□ -0.72
CACNA1A-242ENST00000637485 BRD1O95696 1058 aa10.57□□□□□ -0.72
CACNA1A-242ENST00000637485 POSTNQ15063 836 aa10.57□□□□□ -0.72
CACNA1A-242ENST00000637485 TYW1BQ6NUM6 668 aa10.57□□□□□ -0.72
CACNA1A-242ENST00000637485 TTC6Q86TZ1 520 aa10.57□□□□□ -0.72
CACNA1A-242ENST00000637485 ZC3H15Q8WU90 426 aaKnown RBP10.57□□□□□ -0.72
CACNA1A-242ENST00000637485 ZRANB2O95218 330 aaKnown RBP eCLIP10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 LTKP29376 864 aa10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 ZNF653Q96CK0 615 aa10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 FAM227BQ96M60 508 aa10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 CD2APQ9Y5K6 639 aa10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 DNAJC6O75061 913 aa10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 GNGT2O14610 69 aa10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 GPAA1O43292 621 aa10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 GPC4O75487 556 aa10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 KRT5P13647 590 aa10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 PICALMQ13492 652 aa10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 PDXDC1Q6P996 788 aa10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 KRT82Q9NSB4 513 aa10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 UGGT1Q9NYU2 1555 aa10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 NCBP1Q09161 790 aaKnown RBP10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 TRAPPC3LQ5T215 181 aa10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 CASC4Q6P4E1 433 aa10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 IL17REQ8NFR9 667 aa10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 CCDC87Q9NVE4 849 aa10.56□□□□□ -0.72
CACNA1A-242ENST00000637485 CPA1P15085 419 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 ZNF496Q96IT1 587 aaPredicted RBP10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 USP44Q9H0E7 712 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 TMEM60Q9H2L4 133 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 FBXO2Q9UK22 296 aaPredicted RBP10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 CAPN11Q9UMQ6 739 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 PARP1P09874 1014 aaKnown RBP10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 EEF1GP26641 437 aaKnown RBP10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 HIBADHP31937 336 aaKnown RBP10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 ARHGAP44Q17R89 818 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 EMBQ6PCB8 327 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 HAUS7Q99871 368 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 VWA3AA6NCI4 1184 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 ATF2P15336 505 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 ANO5Q75V66 913 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 C2CD5Q86YS7 1000 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 TDRD7Q8NHU6 1098 aaKnown RBP10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 CACTINQ8WUQ7 758 aaKnown RBP10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 FAM210AQ96ND0 272 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 TRIM15Q9C019 465 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 UPF3AQ9H1J1 476 aaKnown RBP10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 WARS2Q9UGM6 360 aaKnown RBP10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 ZNF229Q9UJW7 825 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 PARP3Q9Y6F1 533 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 CDK12Q9NYV4 1490 aaPredicted RBP10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 CDC42BPAQ5VT25 1732 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 PHKG2P15735 406 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 CRYMQ14894 314 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 TRIM56Q9BRZ2 755 aaKnown RBP10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 ITGB1BP2Q9UKP3 347 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 NSFL1CQ9UNZ2 370 aaKnown RBP10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 LZTS1Q9Y250 596 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 METP08581 1390 aa10.55□□□□□ -0.72
CACNA1A-242ENST00000637485 SPDYE3A6NKU9 549 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 B4E1Z4 1266 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 POLR2DO15514 142 aaKnown RBP10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 BCRP11274 1271 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 SERPINB10P48595 397 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 SLC8A3P57103 927 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 STX1BP61266 288 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 GAS2L3Q86XJ1 694 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 ZNF513Q8N8E2 541 aaPredicted RBP10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 NELFBQ8WX92 580 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 KIAA1468Q9P260 1216 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 TEDDM1Q5T9Z0 273 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 RRAGAQ7L523 313 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 TRAIPQ9BWF2 469 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 PLA2R1Q13018 1463 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 UNC13BO14795 1591 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 LMTK3Q96Q04 1460 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 HEXIM1O94992 359 aaKnown RBP10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 A1BGP04217 495 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 GSPT1P15170 499 aaKnown RBP10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 AP2B1P63010 937 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 DONSONQ9NYP3 566 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 SNX5Q9Y5X3 404 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 IGSF1Q8N6C5 1336 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 F8W031 263 aaPredicted RBP10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 GARSP41250 739 aaKnown RBP10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 HSPA2P54652 639 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 MRPL28Q13084 256 aaKnown RBP10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 TCIRG1Q13488 830 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 CARD10Q9BWT7 1032 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 ABCB6Q9NP58 842 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 TRPM1Q7Z4N2 1603 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 ABCC3O15438 1527 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 USP6P35125 1406 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 ANKRD65E5RJM6 399 aa10.54□□□□□ -0.72
CACNA1A-242ENST00000637485 GNPATO15228 680 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms