RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 TRIM34Q9BYJ4 488 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 JMJD4Q9H9V9 463 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 ARGLU1Q9NWB6 273 aaPredicted RBP13.59□□□□□ -0.23
CLN8-212ENST00000637083 OGFRQ9NZT2 677 aa13.59□□□□□ -0.23
CLN8-212ENST00000637083 MYH8P13535 1937 aa13.58□□□□□ -0.24
CLN8-212ENST00000637083 LGALS16A8MUM7 142 aa13.58□□□□□ -0.24
CLN8-212ENST00000637083 EFCAB8A8MWE9 144 aa13.58□□□□□ -0.24
CLN8-212ENST00000637083 SLC26A4O43511 780 aa13.58□□□□□ -0.24
CLN8-212ENST00000637083 SCNN1DP51172 638 aa13.58□□□□□ -0.24
CLN8-212ENST00000637083 POTEDQ86YR6 584 aa13.58□□□□□ -0.24
CLN8-212ENST00000637083 MB21D1Q8N884 522 aa13.58□□□□□ -0.24
CLN8-212ENST00000637083 UBE2Q2Q8WVN8 375 aa13.58□□□□□ -0.24
CLN8-212ENST00000637083 ABHD10Q9NUJ1 306 aa13.58□□□□□ -0.24
CLN8-212ENST00000637083 MAPK8IP1Q9UQF2 711 aa13.58□□□□□ -0.24
CLN8-212ENST00000637083 BRWD3Q6RI45 1802 aa13.58□□□□□ -0.24
CLN8-212ENST00000637083 SOWAHDA6NJG2 315 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 EIF6P56537 245 aaKnown RBP13.57□□□□□ -0.24
CLN8-212ENST00000637083 TUBB4BP68371 445 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 ELF2Q15723 593 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 MSL1Q68DK7 614 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 STYK1Q6J9G0 422 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 CSGALNACT2Q8N6G5 542 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 RETREG2Q8NC44 543 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 DCAF4Q8WV16 495 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 ZNF622Q969S3 477 aaKnown RBP eCLIP13.57□□□□□ -0.24
CLN8-212ENST00000637083 MKL1Q969V6 931 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 KANSL2Q9H9L4 492 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 TMEM260Q9NX78 707 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 NYAP2Q9P242 653 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 MYO1AQ9UBC5 1043 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 PI4KBQ9UBF8 816 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 H0YIN7 160 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 MARCH6O60337 910 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 KRT9P35527 623 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 FXR1P51114 621 aaKnown RBP eCLIP13.57□□□□□ -0.24
CLN8-212ENST00000637083 MAP3K9P80192 1104 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 ATP2B2Q01814 1243 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 PSMD2Q13200 908 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 NAA30Q147X3 362 aaPredicted RBP13.57□□□□□ -0.24
CLN8-212ENST00000637083 TTI2Q6NXR4 508 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 UNC13DQ70J99 1090 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 LARP4BQ92615 738 aaKnown RBP13.57□□□□□ -0.24
CLN8-212ENST00000637083 MTMR8Q96EF0 704 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 IDI2Q9BXS1 227 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 KCNQ5Q9NR82 932 aa13.57□□□□□ -0.24
CLN8-212ENST00000637083 LUC7L2Q9Y383 392 aaKnown RBP13.57□□□□□ -0.24
CLN8-212ENST00000637083 TNNI2P48788 182 aa13.56□□□□□ -0.24
CLN8-212ENST00000637083 CLK2P49760 499 aaKnown RBP13.56□□□□□ -0.24
CLN8-212ENST00000637083 SEPT2Q15019 361 aa13.56□□□□□ -0.24
CLN8-212ENST00000637083 ARHGAP29Q52LW3 1261 aa13.56□□□□□ -0.24
CLN8-212ENST00000637083 RAD9BQ6WBX8 426 aa13.56□□□□□ -0.24
CLN8-212ENST00000637083 OR8K1Q8NGG5 319 aa13.56□□□□□ -0.24
CLN8-212ENST00000637083 DESI2Q9BSY9 194 aa13.56□□□□□ -0.24
CLN8-212ENST00000637083 PSTPIP2Q9H939 334 aa13.56□□□□□ -0.24
CLN8-212ENST00000637083 TRIM49BA6NDI0 452 aa13.56□□□□□ -0.24
CLN8-212ENST00000637083 CERKLQ49MI3 558 aaPredicted RBP13.56□□□□□ -0.24
CLN8-212ENST00000637083 IRF2BP1Q8IU81 584 aa13.56□□□□□ -0.24
CLN8-212ENST00000637083 ARID3AQ99856 593 aa13.56□□□□□ -0.24
CLN8-212ENST00000637083 MMTAG2Q9BU76 263 aaKnown RBP13.56□□□□□ -0.24
CLN8-212ENST00000637083 NT5C3AQ9H0P0 336 aa13.56□□□□□ -0.24
CLN8-212ENST00000637083 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.56□□□□□ -0.24
CLN8-212ENST00000637083 V9GYY5 206 aaPredicted RBP13.56□□□□□ -0.24
CLN8-212ENST00000637083 KDM3AQ9Y4C1 1321 aa13.55□□□□□ -0.24
CLN8-212ENST00000637083 PES1O00541 588 aaKnown RBP13.55□□□□□ -0.24
CLN8-212ENST00000637083 COBLO75128 1261 aa13.55□□□□□ -0.24
CLN8-212ENST00000637083 PRKCSHP14314 528 aaPredicted RBP13.55□□□□□ -0.24
CLN8-212ENST00000637083 RBM5P52756 815 aaKnown RBP eCLIP13.55□□□□□ -0.24
CLN8-212ENST00000637083 GRB10Q13322 594 aa13.55□□□□□ -0.24
CLN8-212ENST00000637083 ERCC6LQ2NKX8 1250 aa13.55□□□□□ -0.24
CLN8-212ENST00000637083 FKBP15Q5T1M5 1219 aa13.55□□□□□ -0.24
CLN8-212ENST00000637083 FOXR2Q6PJQ5 311 aa13.55□□□□□ -0.24
CLN8-212ENST00000637083 C2CD5Q86YS7 1000 aa13.55□□□□□ -0.24
CLN8-212ENST00000637083 SMAP1Q8IYB5 467 aaPredicted RBP13.55□□□□□ -0.24
CLN8-212ENST00000637083 ZNF507Q8TCN5 953 aa13.55□□□□□ -0.24
CLN8-212ENST00000637083 SNX29Q8TEQ0 813 aa13.55□□□□□ -0.24
CLN8-212ENST00000637083 RAD54LQ92698 747 aa13.55□□□□□ -0.24
CLN8-212ENST00000637083 TUBGCP2Q9BSJ2 902 aa13.55□□□□□ -0.24
CLN8-212ENST00000637083 BMP2KQ9NSY1 1161 aaPredicted RBP13.55□□□□□ -0.24
CLN8-212ENST00000637083 ZNHIT6Q9NWK9 470 aaKnown RBP13.55□□□□□ -0.24
CLN8-212ENST00000637083 DDX25Q9UHL0 483 aaKnown RBP13.55□□□□□ -0.24
CLN8-212ENST00000637083 SERPINA10Q9UK55 444 aa13.55□□□□□ -0.24
CLN8-212ENST00000637083 CAPN11Q9UMQ6 739 aa13.55□□□□□ -0.24
CLN8-212ENST00000637083 MRFAP1Q9Y605 127 aa13.55□□□□□ -0.24
CLN8-212ENST00000637083 GOLGB1Q14789 3259 aaKnown RBP13.55□□□□□ -0.24
CLN8-212ENST00000637083 ABCB11O95342 1321 aa13.55□□□□□ -0.24
CLN8-212ENST00000637083 TDP2O95551 362 aa13.54□□□□□ -0.24
CLN8-212ENST00000637083 USP11P51784 963 aa13.54□□□□□ -0.24
CLN8-212ENST00000637083 MTF1Q14872 753 aa13.54□□□□□ -0.24
CLN8-212ENST00000637083 CC2D2BQ6DHV5 1058 aa13.54□□□□□ -0.24
CLN8-212ENST00000637083 SUPT20HQ8NEM7 779 aa13.54□□□□□ -0.24
CLN8-212ENST00000637083 CNKSR1Q969H4 720 aa13.54□□□□□ -0.24
CLN8-212ENST00000637083 KIFC2Q96AC6 838 aa13.54□□□□□ -0.24
CLN8-212ENST00000637083 CARD6Q9BX69 1037 aa13.54□□□□□ -0.24
CLN8-212ENST00000637083 MRPL44Q9H9J2 332 aaKnown RBP13.54□□□□□ -0.24
CLN8-212ENST00000637083 DBNDD1Q9H9R9 158 aa13.54□□□□□ -0.24
CLN8-212ENST00000637083 DDX41Q9UJV9 622 aaKnown RBP13.54□□□□□ -0.24
CLN8-212ENST00000637083 STK24Q9Y6E0 443 aa13.54□□□□□ -0.24
CLN8-212ENST00000637083 GREB1LQ9C091 1923 aaPredicted RBP13.54□□□□□ -0.24
CLN8-212ENST00000637083 SLC1A4P43007 532 aa13.54□□□□□ -0.24
CLN8-212ENST00000637083 MTIF2P46199 727 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms