RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 PUM3Q15397 648 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 TTI2Q6NXR4 508 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 CSGALNACT2Q8N6G5 542 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 DHTKD1Q96HY7 919 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 PCDHA13Q9Y5I0 950 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 CAPN6Q9Y6Q1 641 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 hCG_1642624A0A1W2PR95 340 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 SRRM3A6NNA2 597 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 NPY5RQ15761 445 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 KIF6Q6ZMV9 814 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 IQCKQ8N0W5 287 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 GIMAP7Q8NHV1 300 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 CHD4Q14839 1912 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 PPP1R37O75864 691 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 SMTNP53814 917 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 PAK2Q13177 524 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 KCTD16Q68DU8 428 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 LCORLQ8N3X6 602 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 SH2D3CQ8N5H7 860 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 C1orf131Q8NDD1 294 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 RNPC3Q96LT9 517 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 DISC1Q9NRI5 854 aa17.29■□□□□ 0.36
CACNA1A-235ENST00000637004 BICDL2A1A5D9 508 aa17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 RASSF10A6NK89 507 aa17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 ERVV-2B6SEH9 535 aa17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 KRT14P02533 472 aa17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 DRP2Q13474 957 aa17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 NEDD9Q14511 834 aa17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 IL17AQ16552 155 aa17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 FKBP15Q5T1M5 1219 aa17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 PIK3AP1Q6ZUJ8 805 aa17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 CD302Q8IX05 232 aa17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 GIMAP8Q8ND71 665 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 RNF14Q9UBS8 474 aa17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 ZNF263O14978 683 aa17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 RHOBTB3O94955 611 aa17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 NR1D1P20393 614 aa17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 HNRNPH3P31942 346 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 CTSWP56202 376 aa17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 RNF187Q5TA31 235 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 SMCR8Q8TEV9 937 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 ZNF473Q8WTR7 871 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 CCDC43Q96MW1 224 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 ERGIC2Q96RQ1 377 aa17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 VCPKMTQ9H867 229 aa17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 TSKSQ9UJT2 592 aa17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 ZNF330Q9Y3S2 320 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-235ENST00000637004 MOCS3O95396 460 aa17.27■□□□□ 0.36
CACNA1A-235ENST00000637004 PLEKHA8P1O95397 391 aa17.27■□□□□ 0.36
CACNA1A-235ENST00000637004 ACTN3Q08043 901 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-235ENST00000637004 PTGISQ16647 500 aa17.27■□□□□ 0.36
CACNA1A-235ENST00000637004 IFIT1BQ5T764 474 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-235ENST00000637004 NFRKBQ6P4R8 1299 aa17.27■□□□□ 0.36
CACNA1A-235ENST00000637004 MREGQ8N565 214 aa17.27■□□□□ 0.36
CACNA1A-235ENST00000637004 RASSF8Q8NHQ8 419 aa17.27■□□□□ 0.36
CACNA1A-235ENST00000637004 PLAGL2Q9UPG8 496 aa17.27■□□□□ 0.36
CACNA1A-235ENST00000637004 TULP1O00294 542 aaPredicted RBP17.27■□□□□ 0.35
CACNA1A-235ENST00000637004 MTIF2P46199 727 aaKnown RBP17.27■□□□□ 0.35
CACNA1A-235ENST00000637004 NLRP5P59047 1200 aa17.27■□□□□ 0.35
CACNA1A-235ENST00000637004 CFAP221Q4G0U5 840 aa17.27■□□□□ 0.35
CACNA1A-235ENST00000637004 GRIPAP1Q4V328 841 aa17.27■□□□□ 0.35
CACNA1A-235ENST00000637004 TMED8Q6PL24 325 aaPredicted RBP17.27■□□□□ 0.35
CACNA1A-235ENST00000637004 KRT26Q7Z3Y9 468 aa17.27■□□□□ 0.35
CACNA1A-235ENST00000637004 ENAHQ8N8S7 591 aaPredicted RBP17.27■□□□□ 0.35
CACNA1A-235ENST00000637004 ZSCAN10Q96SZ4 725 aaPredicted RBP17.27■□□□□ 0.35
CACNA1A-235ENST00000637004 NOC4LQ9BVI4 516 aaKnown RBP17.27■□□□□ 0.35
CACNA1A-235ENST00000637004 MLXIPQ9HAP2 919 aa17.27■□□□□ 0.35
CACNA1A-235ENST00000637004 KLC4Q9NSK0 619 aa17.27■□□□□ 0.35
CACNA1A-235ENST00000637004 PCDH11XQ9BZA7 1347 aa17.27■□□□□ 0.35
CACNA1A-235ENST00000637004 PCDH11YQ9BZA8 1340 aa17.27■□□□□ 0.35
CACNA1A-235ENST00000637004 C21orf2O43822 256 aa17.26■□□□□ 0.35
CACNA1A-235ENST00000637004 KLK7P49862 253 aa17.26■□□□□ 0.35
CACNA1A-235ENST00000637004 CDR1P51861 262 aa17.26■□□□□ 0.35
CACNA1A-235ENST00000637004 MRPS25P82663 173 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-235ENST00000637004 GUCY1A3Q02108 690 aa17.26■□□□□ 0.35
CACNA1A-235ENST00000637004 CCDC40Q4G0X9 1142 aa17.26■□□□□ 0.35
CACNA1A-235ENST00000637004 CCDC47Q96A33 483 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-235ENST00000637004 SUFUQ9UMX1 484 aa17.26■□□□□ 0.35
CACNA1A-235ENST00000637004 HMGB1P1B2RPK0 211 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-235ENST00000637004 FAM107AO95990 144 aa17.26■□□□□ 0.35
CACNA1A-235ENST00000637004 SLC5A1P13866 664 aa17.26■□□□□ 0.35
CACNA1A-235ENST00000637004 KIF11P52732 1056 aa17.26■□□□□ 0.35
CACNA1A-235ENST00000637004 RASGRF1Q13972 1273 aa17.26■□□□□ 0.35
CACNA1A-235ENST00000637004 CNOT6LQ96LI5 555 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-235ENST00000637004 CCT8L2Q96SF2 557 aa17.26■□□□□ 0.35
CACNA1A-235ENST00000637004 CDCA7Q9BWT1 371 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-235ENST00000637004 GDF3Q9NR23 364 aa17.26■□□□□ 0.35
CACNA1A-235ENST00000637004 MYH6P13533 1939 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 ZNF233A6NK53 670 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 LCA5LO95447 670 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 CXCR5P32302 372 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 MDH1P40925 334 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 PPP1R2P41236 205 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 TYW1BQ6NUM6 668 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 TMTC3Q6ZXV5 915 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 NLRP14Q86W24 1093 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 ZSCAN29Q8IWY8 852 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 MYCBPAPQ8TBZ2 947 aa17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 ZKSCAN4Q969J2 545 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-235ENST00000637004 DUSP9Q99956 384 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms