RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 C12orf42Q96LP6 360 aa9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 AGBL1Q96MI9 1066 aa9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 PTPN18Q99952 460 aa9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 RIPK3Q9Y572 518 aa9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 SYDE2Q5VT97 1194 aa9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 ZNF784Q8NCA9 323 aaPredicted RBP9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 REPS2Q8NFH8 660 aa9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 RASSF8Q8NHQ8 419 aa9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 HOOK2Q96ED9 719 aa9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 ZIC5Q96T25 663 aa9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 GBA2Q9HCG7 927 aaPredicted RBP9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 TMEM260Q9NX78 707 aa9.34□□□□□ -0.91
CACNA1A-232ENST00000636966 PPATQ06203 517 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 SAPCD2Q86UD0 394 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 RANBP17Q9H2T7 1088 aaKnown RBP9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 KCNH4Q9UQ05 1017 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 PNMA6FA0A0J9YX94 578 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 NOLC1Q14978 699 aaKnown RBP eCLIP9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 USH1GQ495M9 461 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 ERO1BQ86YB8 467 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 LINC00301Q8NCQ3 95 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 CNNM3Q8NE01 707 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 ZMYND12Q9H0C1 365 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 GINM1Q9NU53 330 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 ADAMTS5Q9UNA0 930 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 CSADQ9Y600 493 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 ZNF500O60304 480 aaPredicted RBP9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 PTGS1P23219 599 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 GNAQP50148 359 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 CCDC174Q6PII3 467 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 AOPEPQ8N6M6 819 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 LPAR1Q92633 364 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 ATG4CQ96DT6 458 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 RRP36Q96EU6 259 aaKnown RBP9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 LZTS2Q9BRK4 669 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 PCDHA6Q9UN73 950 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 PCDHA8Q9Y5H6 950 aa9.33□□□□□ -0.92
CACNA1A-232ENST00000636966 WDR46O15213 610 aaKnown RBP9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 UBE2SQ16763 222 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 CATSPERGQ6ZRH7 1159 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 ZNF592Q92610 1267 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 TANGO6Q9C0B7 1094 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 CEP131Q9UPN4 1083 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 UQCRHLA0A096LP55 91 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 USP17L15C9J2P7 530 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 USP17L13C9JLJ4 530 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 USP17L11C9JVI0 530 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 USP17L18D6R9N7 530 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 USP17L22D6RA61 530 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 USP17L17D6RBQ6 530 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 USP17L19D6RCP7 530 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 USP17L20D6RJB6 530 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 VWA5AO00534 786 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 MEIS2O14770 477 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 ZNF202O95125 648 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 UQCRHP07919 91 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 CDK11BP21127 795 aaKnown RBP9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 CLK2P49760 499 aaKnown RBP9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 NDUFA8P51970 172 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 USP17L24Q0WX57 530 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 HSP90AA2PQ14568 343 aaPredicted RBP9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 USP17L6PQ6QN14 398 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 SLC38A10Q9HBR0 1119 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 TXNRD2Q9NNW7 524 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 POLR3EQ9NVU0 708 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 PPP1R9AQ9ULJ8 1098 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 A0A087WWV3 80 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 SPDYE16A6NNV3 312 aaPredicted RBP9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 SMTNL1A8MU46 457 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 PLA2G6O60733 806 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 TMEM132BQ14DG7 1078 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 NOSTRINQ8IVI9 506 aa9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 C17orf53Q8N3J3 647 aaPredicted RBP9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 PURBQ96QR8 312 aaKnown RBP9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 ZNF214Q9UL59 606 aaPredicted RBP9.32□□□□□ -0.92
CACNA1A-232ENST00000636966 FLOT1O75955 427 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 NF2P35240 595 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 PPIL2Q13356 520 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 TPD52L1Q16890 204 aaPredicted RBP9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 PPP4R3BQ5MIZ7 849 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 ARMC9Q7Z3E5 817 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 PDILTQ8N807 584 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 PCDHA1Q9Y5I3 950 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 A0A1W2PQ27 194 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 A0A1W2PQ64 194 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 A0A1W2PQD8 194 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 SMCO2A6NFE2 343 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 FAM155AB1AL88 458 aaPredicted RBP9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 SERPINC1P01008 464 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 NUBP1P53384 320 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 IKQ13123 557 aaPredicted RBP9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 MUM1L1Q5H9M0 696 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 BRI3BPQ8WY22 251 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 ARID3AQ99856 593 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 GOLPH3LQ9H4A5 285 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 BTBD7Q9P203 1132 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 FEM1BQ9UK73 627 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 PCDHB6Q9Y5E3 794 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 ZNF75DP51815 510 aa9.31□□□□□ -0.92
CACNA1A-232ENST00000636966 GRIN1Q05586 938 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms