RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 TAP1Q03518 808 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 DUSP28Q4G0W2 176 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 CASC1Q6TDU7 716 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 HERC6Q8IVU3 1022 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 CPXCR1Q8N123 301 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 CCDC155Q8N6L0 562 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 RETREG2Q8NC44 543 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 KIFC2Q96AC6 838 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 EVI5LQ96CN4 794 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 VWCEQ96DN2 955 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 HAUS7Q99871 368 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 TRPV6Q9H1D0 765 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 UPF2Q9HAU5 1272 aaKnown RBP8.72□□□□□ -1.01
CIITA-214ENST00000636238 RAVER2Q9HCJ3 691 aaKnown RBP8.72□□□□□ -1.01
CIITA-214ENST00000636238 A1CFQ9NQ94 594 aaKnown RBP8.72□□□□□ -1.01
CIITA-214ENST00000636238 MTMR4Q9NYA4 1195 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 ADD3Q9UEY8 706 aaKnown RBP8.72□□□□□ -1.01
CIITA-214ENST00000636238 SLC4A4Q9Y6R1 1079 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 UMODL1Q5DID0 1318 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 NAV1Q8NEY1 1877 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 RBM47A0AV96 593 aaKnown RBP8.71□□□□□ -1.02
CIITA-214ENST00000636238 SMIM22K7EJ46 135 aa8.71□□□□□ -1.02
CIITA-214ENST00000636238 BMP3P12645 472 aa8.71□□□□□ -1.02
CIITA-214ENST00000636238 STAT2P52630 851 aa8.71□□□□□ -1.02
CIITA-214ENST00000636238 BEX3Q00994 111 aa8.71□□□□□ -1.02
CIITA-214ENST00000636238 TTLL4Q14679 1199 aa8.71□□□□□ -1.02
CIITA-214ENST00000636238 LEXMQ3ZCV2 418 aa8.71□□□□□ -1.02
CIITA-214ENST00000636238 TAPT1Q6NXT6 567 aa8.71□□□□□ -1.02
CIITA-214ENST00000636238 ZNF444Q8N0Y2 327 aaPredicted RBP8.71□□□□□ -1.02
CIITA-214ENST00000636238 CAGE1Q8TC20 777 aa8.71□□□□□ -1.02
CIITA-214ENST00000636238 STAG1Q8WVM7 1258 aa8.71□□□□□ -1.02
CIITA-214ENST00000636238 MPHOSPH6Q99547 160 aaKnown RBP8.71□□□□□ -1.02
CIITA-214ENST00000636238 NUP88Q99567 741 aaPredicted RBP8.71□□□□□ -1.02
CIITA-214ENST00000636238 ESYT1Q9BSJ8 1104 aa8.71□□□□□ -1.02
CIITA-214ENST00000636238 MTG1Q9BT17 334 aaPredicted RBP8.71□□□□□ -1.02
CIITA-214ENST00000636238 FSD1Q9BTV5 496 aa8.71□□□□□ -1.02
CIITA-214ENST00000636238 C22orf23Q9BZE7 217 aa8.71□□□□□ -1.02
CIITA-214ENST00000636238 C11orf16Q9NQ32 467 aa8.71□□□□□ -1.02
CIITA-214ENST00000636238 RNF146Q9NTX7 359 aa8.71□□□□□ -1.02
CIITA-214ENST00000636238 FAM50BQ9Y247 325 aa8.71□□□□□ -1.02
CIITA-214ENST00000636238 CYP2D7A0A087X1C5 515 aa8.7□□□□□ -1.02
CIITA-214ENST00000636238 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.7□□□□□ -1.02
CIITA-214ENST00000636238 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.7□□□□□ -1.02
CIITA-214ENST00000636238 SOWAHBA6NEL2 793 aa8.7□□□□□ -1.02
CIITA-214ENST00000636238 MYOGP15173 224 aa8.7□□□□□ -1.02
CIITA-214ENST00000636238 ANP32AP39687 249 aaKnown RBP8.7□□□□□ -1.02
CIITA-214ENST00000636238 KCNJ6P48051 423 aa8.7□□□□□ -1.02
CIITA-214ENST00000636238 PURAQ00577 322 aaKnown RBP8.7□□□□□ -1.02
CIITA-214ENST00000636238 RBL2Q08999 1139 aa8.7□□□□□ -1.02
CIITA-214ENST00000636238 NMIQ13287 307 aaPredicted RBP8.7□□□□□ -1.02
CIITA-214ENST00000636238 GRB10Q13322 594 aa8.7□□□□□ -1.02
CIITA-214ENST00000636238 RCSD1Q6JBY9 416 aa8.7□□□□□ -1.02
CIITA-214ENST00000636238 CWC27Q6UX04 472 aaKnown RBP8.7□□□□□ -1.02
CIITA-214ENST00000636238 GJD3Q8N144 294 aa8.7□□□□□ -1.02
CIITA-214ENST00000636238 AFAP1L1Q8TED9 768 aa8.7□□□□□ -1.02
CIITA-214ENST00000636238 ARNTL2Q8WYA1 636 aa8.7□□□□□ -1.02
CIITA-214ENST00000636238 TBC1D32Q96NH3 1257 aa8.7□□□□□ -1.02
CIITA-214ENST00000636238 STRBPQ96SI9 672 aaKnown RBP8.7□□□□□ -1.02
CIITA-214ENST00000636238 IL25Q9H293 177 aa8.7□□□□□ -1.02
CIITA-214ENST00000636238 GPHNQ9NQX3 736 aaPredicted RBP8.7□□□□□ -1.02
CIITA-214ENST00000636238 DIAPH3Q9NSV4 1193 aa8.7□□□□□ -1.02
CIITA-214ENST00000636238 CYP39A1Q9NYL5 469 aa8.7□□□□□ -1.02
CIITA-214ENST00000636238 CLIP2Q9UDT6 1046 aa8.7□□□□□ -1.02
CIITA-214ENST00000636238 CTNNA3Q9UI47 895 aa8.7□□□□□ -1.02
CIITA-214ENST00000636238 A6NJR5 290 aa8.69□□□□□ -1.02
CIITA-214ENST00000636238 B4DLN1 442 aa8.69□□□□□ -1.02
CIITA-214ENST00000636238 LPXNO60711 386 aa8.69□□□□□ -1.02
CIITA-214ENST00000636238 CHGBP05060 677 aa8.69□□□□□ -1.02
CIITA-214ENST00000636238 ZFYP08048 801 aaPredicted RBP8.69□□□□□ -1.02
CIITA-214ENST00000636238 SLC3A2P08195 630 aaKnown RBP8.69□□□□□ -1.02
CIITA-214ENST00000636238 IQCF3P0C7M6 154 aa8.69□□□□□ -1.02
CIITA-214ENST00000636238 MRPL12P52815 198 aaKnown RBP8.69□□□□□ -1.02
CIITA-214ENST00000636238 ERVK-21P61565 698 aa8.69□□□□□ -1.02
CIITA-214ENST00000636238 IRX5P78411 483 aaPredicted RBP8.69□□□□□ -1.02
CIITA-214ENST00000636238 CNTN2Q02246 1040 aa8.69□□□□□ -1.02
CIITA-214ENST00000636238 SLFNL1Q499Z3 407 aa8.69□□□□□ -1.02
CIITA-214ENST00000636238 SLFN13Q68D06 897 aa8.69□□□□□ -1.02
CIITA-214ENST00000636238 SESTD1Q86VW0 696 aa8.69□□□□□ -1.02
CIITA-214ENST00000636238 FAM178BQ8IXR5 827 aa8.69□□□□□ -1.02
CIITA-214ENST00000636238 NEDD1Q8NHV4 660 aa8.69□□□□□ -1.02
CIITA-214ENST00000636238 SCLYQ96I15 445 aa8.69□□□□□ -1.02
CIITA-214ENST00000636238 FAM227BQ96M60 508 aa8.69□□□□□ -1.02
CIITA-214ENST00000636238 SAMD11Q96NU1 681 aa8.69□□□□□ -1.02
CIITA-214ENST00000636238 TRERF1Q96PN7 1200 aa8.69□□□□□ -1.02
CIITA-214ENST00000636238 TGS1Q96RS0 853 aaKnown RBP8.69□□□□□ -1.02
CIITA-214ENST00000636238 USP26Q9BXU7 913 aa8.69□□□□□ -1.02
CIITA-214ENST00000636238 UBE2ZQ9H832 354 aaPredicted RBP8.69□□□□□ -1.02
CIITA-214ENST00000636238 PRKAG3Q9UGI9 489 aa8.69□□□□□ -1.02
CIITA-214ENST00000636238 ZNF536O15090 1300 aa8.69□□□□□ -1.02
CIITA-214ENST00000636238 SMCHD1A6NHR9 2005 aa8.68□□□□□ -1.02
CIITA-214ENST00000636238 ABHD14A-ACY1A0A1B0GW23 586 aa8.68□□□□□ -1.02
CIITA-214ENST00000636238 EPOPA6NHQ4 379 aa8.68□□□□□ -1.02
CIITA-214ENST00000636238 GSG1L2A8MUP6 293 aa8.68□□□□□ -1.02
CIITA-214ENST00000636238 TMEM232C9JQI7 657 aa8.68□□□□□ -1.02
CIITA-214ENST00000636238 NCK2O43639 380 aa8.68□□□□□ -1.02
CIITA-214ENST00000636238 CXCL10P02778 98 aa8.68□□□□□ -1.02
CIITA-214ENST00000636238 SLC1A4P43007 532 aa8.68□□□□□ -1.02
CIITA-214ENST00000636238 PSMC6P62333 389 aa8.68□□□□□ -1.02
CIITA-214ENST00000636238 PDE4BQ07343 736 aa8.68□□□□□ -1.02
CIITA-214ENST00000636238 PKN1Q16512 942 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms