RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ZMAT2Q96NC0 199 aaKnown RBP6.04□□□□□ -1.44
SCN1A-209ENST00000635750 GIMAP4Q9NUV9 329 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 HACD3Q9P035 362 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 NFKBIL1Q9UBC1 381 aaPredicted RBP6.04□□□□□ -1.44
SCN1A-209ENST00000635750 TLK1Q9UKI8 766 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 PA2G4Q9UQ80 394 aaKnown RBP6.04□□□□□ -1.44
SCN1A-209ENST00000635750 SLC4A7Q9Y6M7 1214 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 CPP00450 1065 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 ARL4AP40617 200 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 ZC3H12BQ5HYM0 836 aaKnown RBP6.04□□□□□ -1.44
SCN1A-209ENST00000635750 KRBA2Q6ZNG9 492 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 APPBP2Q92624 585 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 SELENONQ9NZV5 590 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 DDX25Q9UHL0 483 aaKnown RBP6.04□□□□□ -1.44
SCN1A-209ENST00000635750 UHRF1BP1LA0JNW5 1464 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 SMCO2A6NFE2 343 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 MCF2LO15068 1137 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 MFSD14BQ5SR56 506 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 FBXO31Q5XUX0 539 aaPredicted RBP6.04□□□□□ -1.44
SCN1A-209ENST00000635750 ATG16L1Q676U5 607 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 TTC23LQ6PF05 361 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 MAPKAPK5Q8IW41 473 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 LRRC8CQ8TDW0 803 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 MORC4Q8TE76 937 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 KIFC3Q9BVG8 833 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 SPZ1Q9BXG8 430 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 DYRK4Q9NR20 520 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 KRIT1O00522 736 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 GTF2IP78347 998 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 TMTC3Q6ZXV5 915 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 RRAGAQ7L523 313 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 CCNYQ8ND76 341 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 MEIS3Q99687 375 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 POLKQ9UBT6 870 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 NOS1P29475 1434 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 MAFGO15525 162 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 ABCB4P21439 1286 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 IREB2P48200 963 aaKnown RBP6.04□□□□□ -1.44
SCN1A-209ENST00000635750 DRP2Q13474 957 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 CEP85Q6P2H3 762 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 LCA5Q86VQ0 697 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 SYNDIG1Q9H7V2 258 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 STX18Q9P2W9 335 aaKnown RBP6.04□□□□□ -1.44
SCN1A-209ENST00000635750 IMPACTQ9P2X3 320 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 ZNF148Q9UQR1 794 aa6.04□□□□□ -1.44
SCN1A-209ENST00000635750 NSFP46459 744 aaKnown RBP6.03□□□□□ -1.44
SCN1A-209ENST00000635750 FAM89AQ96GI7 184 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 CDHR1Q96JP9 859 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 ZBTB18Q99592 522 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 TRIM55Q9BYV6 548 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 CLCA2Q9UQC9 943 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 CA4P22748 312 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 BLVRAP53004 296 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 AK2P54819 239 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 YWHAHQ04917 246 aaPredicted RBP6.03□□□□□ -1.44
SCN1A-209ENST00000635750 ART3Q13508 389 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 TYW1BQ6NUM6 668 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 BZW1Q7L1Q6 419 aaKnown RBP6.03□□□□□ -1.44
SCN1A-209ENST00000635750 MYOCDQ8IZQ8 938 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 SIX6OS1Q8N1H7 587 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 CFAP61Q8NHU2 1237 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 OTUB1Q96FW1 271 aaPredicted RBP6.03□□□□□ -1.44
SCN1A-209ENST00000635750 UIMC1Q96RL1 719 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 ABCC1P33527 1531 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 BNIP3LO60238 219 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 HIP1RO75146 1068 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 MYCP01106 439 aaPredicted RBP6.03□□□□□ -1.44
SCN1A-209ENST00000635750 SNX1Q13596 522 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 IDI1Q13907 227 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 SPATA5Q8NB90 893 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 DDX41Q9UJV9 622 aaKnown RBP6.03□□□□□ -1.44
SCN1A-209ENST00000635750 COL4A3BPQ9Y5P4 624 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 EIF2AK4Q9P2K8 1649 aaKnown RBP6.03□□□□□ -1.44
SCN1A-209ENST00000635750 GPAA1O43292 621 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 HSPA6P17066 643 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 RPS6KB1P23443 525 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 EEF1B2P24534 225 aaKnown RBP6.03□□□□□ -1.44
SCN1A-209ENST00000635750 TSC1Q92574 1164 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 XAGE2Q96GT9 111 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 RASSF4Q9H2L5 321 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 ZHX1Q9UKY1 873 aaPredicted RBP6.03□□□□□ -1.44
SCN1A-209ENST00000635750 PCDHA1Q9Y5I3 950 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 FANCAO15360 1455 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 IPO5O00410 1097 aaKnown RBP6.03□□□□□ -1.44
SCN1A-209ENST00000635750 CREB3O43889 395 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 FMNL1O95466 1100 aaPredicted RBP6.03□□□□□ -1.44
SCN1A-209ENST00000635750 ACTN1P12814 892 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 CTNNA1P35221 906 aaKnown RBP6.03□□□□□ -1.44
SCN1A-209ENST00000635750 ARHGEF18Q6ZSZ5 1173 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.03□□□□□ -1.44
SCN1A-209ENST00000635750 ANKRD44Q8N8A2 993 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 TRIM58Q8NG06 486 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 SLC7A3Q8WY07 619 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 FAM149B1Q96BN6 582 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 METTL14Q9HCE5 456 aaKnown RBP6.03□□□□□ -1.44
SCN1A-209ENST00000635750 CHCHD3Q9NX63 227 aaKnown RBP6.03□□□□□ -1.44
SCN1A-209ENST00000635750 PASKQ96RG2 1323 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 FLT4P35916 1363 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 EEF1GP26641 437 aaKnown RBP6.03□□□□□ -1.44
SCN1A-209ENST00000635750 ARL4DP49703 201 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms