RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 BUB1O43683 1085 aa16.08■□□□□ 0.16
PTBP1-221ENST00000635647 ATP1A1P05023 1023 aaKnown RBP16.08■□□□□ 0.16
PTBP1-221ENST00000635647 PRPF4BQ13523 1007 aaKnown RBP16.08■□□□□ 0.16
PTBP1-221ENST00000635647 WHAMMP3Q1A5X7 153 aa16.08■□□□□ 0.16
PTBP1-221ENST00000635647 RRAGAQ7L523 313 aa16.08■□□□□ 0.16
PTBP1-221ENST00000635647 MAEAQ7L5Y9 396 aa16.08■□□□□ 0.16
PTBP1-221ENST00000635647 LINC00116Q8NCU8 138 aa16.08■□□□□ 0.16
PTBP1-221ENST00000635647 GIMAP7Q8NHV1 300 aa16.08■□□□□ 0.16
PTBP1-221ENST00000635647 SMCR8Q8TEV9 937 aaPredicted RBP16.08■□□□□ 0.16
PTBP1-221ENST00000635647 TMEM47Q9BQJ4 181 aa16.08■□□□□ 0.16
PTBP1-221ENST00000635647 ZC3H12CQ9C0D7 883 aaKnown RBP16.08■□□□□ 0.16
PTBP1-221ENST00000635647 COL18A1P39060 1754 aa16.08■□□□□ 0.16
PTBP1-221ENST00000635647 TJP1Q07157 1748 aa16.08■□□□□ 0.16
PTBP1-221ENST00000635647 CHMP2AO43633 222 aa16.07■□□□□ 0.16
PTBP1-221ENST00000635647 USO1O60763 962 aaKnown RBP16.07■□□□□ 0.16
PTBP1-221ENST00000635647 OR52Z1P0C646 297 aa16.07■□□□□ 0.16
PTBP1-221ENST00000635647 HLTFQ14527 1009 aaKnown RBP eCLIP16.07■□□□□ 0.16
PTBP1-221ENST00000635647 CASP8Q14790 479 aa16.07■□□□□ 0.16
PTBP1-221ENST00000635647 UBE2SQ16763 222 aa16.07■□□□□ 0.16
PTBP1-221ENST00000635647 KRT79Q5XKE5 535 aa16.07■□□□□ 0.16
PTBP1-221ENST00000635647 PPM1EQ8WY54 764 aa16.07■□□□□ 0.16
PTBP1-221ENST00000635647 PCDHA6Q9UN73 950 aa16.07■□□□□ 0.16
PTBP1-221ENST00000635647 PCDHA8Q9Y5H6 950 aa16.07■□□□□ 0.16
PTBP1-221ENST00000635647 SEMA3EO15041 775 aa16.07■□□□□ 0.16
PTBP1-221ENST00000635647 ZNF185O15231 689 aa16.07■□□□□ 0.16
PTBP1-221ENST00000635647 DNM2P50570 870 aa16.07■□□□□ 0.16
PTBP1-221ENST00000635647 RNF187Q5TA31 235 aaPredicted RBP16.07■□□□□ 0.16
PTBP1-221ENST00000635647 KCTD1Q719H9 257 aa16.07■□□□□ 0.16
PTBP1-221ENST00000635647 ANKZF1Q9H8Y5 726 aa16.07■□□□□ 0.16
PTBP1-221ENST00000635647 BCCIPQ9P287 314 aaKnown RBP eCLIP16.07■□□□□ 0.16
PTBP1-221ENST00000635647 TCEAL9Q9UHQ7 104 aa16.07■□□□□ 0.16
PTBP1-221ENST00000635647 DUSP10Q9Y6W6 482 aa16.07■□□□□ 0.16
PTBP1-221ENST00000635647 GOLGB1Q14789 3259 aaKnown RBP16.07■□□□□ 0.16
PTBP1-221ENST00000635647 SLURP2P0DP57 97 aa16.07■□□□□ 0.16
PTBP1-221ENST00000635647 PCP11498 1178 aaKnown RBP16.07■□□□□ 0.16
PTBP1-221ENST00000635647 DPP8Q6V1X1 898 aaPredicted RBP16.07■□□□□ 0.16
PTBP1-221ENST00000635647 APTXQ7Z2E3 356 aaKnown RBP16.07■□□□□ 0.16
PTBP1-221ENST00000635647 FAM114A1Q8IWE2 563 aa16.07■□□□□ 0.16
PTBP1-221ENST00000635647 TBCKQ8TEA7 893 aa16.07■□□□□ 0.16
PTBP1-221ENST00000635647 HAUS4Q9H6D7 363 aa16.07■□□□□ 0.16
PTBP1-221ENST00000635647 BICDL2A1A5D9 508 aa16.06■□□□□ 0.16
PTBP1-221ENST00000635647 ORC4O43929 436 aa16.06■□□□□ 0.16
PTBP1-221ENST00000635647 GNA11P29992 359 aa16.06■□□□□ 0.16
PTBP1-221ENST00000635647 USP8P40818 1118 aa16.06■□□□□ 0.16
PTBP1-221ENST00000635647 STK4Q13043 487 aa16.06■□□□□ 0.16
PTBP1-221ENST00000635647 TBC1D10BQ4KMP7 808 aaPredicted RBP16.06■□□□□ 0.16
PTBP1-221ENST00000635647 SV2BQ7L1I2 683 aa16.06■□□□□ 0.16
PTBP1-221ENST00000635647 ADSSL1Q8N142 457 aa16.06■□□□□ 0.16
PTBP1-221ENST00000635647 REXO1Q8N1G1 1221 aaKnown RBP16.06■□□□□ 0.16
PTBP1-221ENST00000635647 LGALS16A8MUM7 142 aa16.06■□□□□ 0.16
PTBP1-221ENST00000635647 NPY5RQ15761 445 aa16.06■□□□□ 0.16
PTBP1-221ENST00000635647 DCAF17Q5H9S7 520 aaPredicted RBP16.06■□□□□ 0.16
PTBP1-221ENST00000635647 ARL6IP4Q66PJ3 421 aaKnown RBP16.06■□□□□ 0.16
PTBP1-221ENST00000635647 NHEJ1Q9H9Q4 299 aaPredicted RBP16.06■□□□□ 0.16
PTBP1-221ENST00000635647 ATP8B1O43520 1251 aa16.06■□□□□ 0.16
PTBP1-221ENST00000635647 C2orf54Q08AI8 447 aa16.06■□□□□ 0.16
PTBP1-221ENST00000635647 FBXO33Q7Z6M2 555 aa16.06■□□□□ 0.16
PTBP1-221ENST00000635647 KIAA0825Q8IV33 1275 aa16.06■□□□□ 0.16
PTBP1-221ENST00000635647 P2RX5Q93086 422 aa16.06■□□□□ 0.16
PTBP1-221ENST00000635647 FAM204AQ9H8W3 233 aa16.06■□□□□ 0.16
PTBP1-221ENST00000635647 IL17RBQ9NRM6 502 aa16.06■□□□□ 0.16
PTBP1-221ENST00000635647 LAMB4A4D0S4 1761 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 POTEMA6NI47 508 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 ATP2C2O75185 946 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 KIAA0754O94854 1291 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 RAPGEF1Q13905 1077 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 MAP9Q49MG5 647 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 ANKRD40Q6AI12 368 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 MMS19Q96T76 1030 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 MAP2K2P36507 400 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 WDR66Q8TBY9 1149 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 EXOC4Q96A65 974 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 TSG101Q99816 390 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 MXD3Q9BW11 206 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 AKAP11Q9UKA4 1901 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 MYH15Q9Y2K3 1946 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 GSTO1P78417 241 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 CYP4A11Q02928 519 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 SF3B3Q15393 1217 aaKnown RBP16.05■□□□□ 0.16
PTBP1-221ENST00000635647 CALCRLQ16602 461 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 RCSD1Q6JBY9 416 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 NEK8Q86SG6 692 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 IFIH1Q9BYX4 1025 aaKnown RBP16.05■□□□□ 0.16
PTBP1-221ENST00000635647 RAB34Q9BZG1 259 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 ZBTB21Q9ULJ3 1066 aa16.05■□□□□ 0.16
PTBP1-221ENST00000635647 EEF1GP26641 437 aaKnown RBP16.04■□□□□ 0.16
PTBP1-221ENST00000635647 HERC4Q5GLZ8 1057 aaPredicted RBP16.04■□□□□ 0.16
PTBP1-221ENST00000635647 C12orf60Q5U649 245 aa16.04■□□□□ 0.16
PTBP1-221ENST00000635647 DGKHQ86XP1 1220 aa16.04■□□□□ 0.16
PTBP1-221ENST00000635647 SPICE1Q8N0Z3 855 aa16.04■□□□□ 0.16
PTBP1-221ENST00000635647 EHBP1Q8NDI1 1231 aa16.04■□□□□ 0.16
PTBP1-221ENST00000635647 ZNF526Q8TF50 670 aaPredicted RBP16.04■□□□□ 0.16
PTBP1-221ENST00000635647 SPAG5Q96R06 1193 aa16.04■□□□□ 0.16
PTBP1-221ENST00000635647 GGA1Q9UJY5 639 aa16.04■□□□□ 0.16
PTBP1-221ENST00000635647 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.04■□□□□ 0.161e-6■■□□□ 13.4
PTBP1-221ENST00000635647 MYH2Q9UKX2 1941 aa16.04■□□□□ 0.16
PTBP1-221ENST00000635647 TACC1O75410 805 aa16.04■□□□□ 0.16
PTBP1-221ENST00000635647 CCT5P48643 541 aa16.04■□□□□ 0.16
PTBP1-221ENST00000635647 CCDC91Q7Z6B0 441 aa16.04■□□□□ 0.16
PTBP1-221ENST00000635647 PACS2Q86VP3 889 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms