RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 PDZRN3Q9UPQ7 1066 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 PCDHGA9Q9Y5G4 932 aaKnown RBP9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 PCDHGA8Q9Y5G5 932 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 PCDHGA7Q9Y5G6 932 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 PCDHGA6Q9Y5G7 932 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 PCDHGA3Q9Y5H0 932 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 PCDHGA2Q9Y5H1 932 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 J3QL48 77 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 CBX4O00257 560 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 GLRX3O76003 335 aaKnown RBP9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 AGR2O95994 175 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 F11P03951 625 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 HSPA6P17066 643 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 IREB2P48200 963 aaKnown RBP9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 KRT85P78386 507 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 GPSM2P81274 684 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 SF1Q15637 639 aaKnown RBP9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 IGF2-ASQ6U949 168 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 ADAT2Q7Z6V5 191 aaKnown RBP9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 DDX54Q8TDD1 881 aaKnown RBP9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 BTN2A2Q8WVV5 523 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 TAAR9Q96RI9 348 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 FBXO2Q9UK22 296 aaPredicted RBP9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 FGD6Q6ZV73 1430 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 MAGI2Q86UL8 1455 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 GHRHP01286 108 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 ZKSCAN1P17029 563 aaPredicted RBP9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 VCAM1P19320 739 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 LSSP48449 732 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 TRIM14Q14142 442 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 DCAF15Q66K64 600 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 CLRN3Q8NCR9 226 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 ELMO3Q96BJ8 720 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 SPTLC3Q9NUV7 552 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 C14orf119Q9NWQ9 140 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 PCDHA9Q9Y5H5 950 aa9.03□□□□□ -0.96
SMARCA2-243ENST00000635590 CCDC18Q5T9S5 1454 aa9.02□□□□□ -0.97
SMARCA2-243ENST00000635590 WASHC2AQ641Q2 1341 aa9.02□□□□□ -0.97
SMARCA2-243ENST00000635590 YEATS2Q9ULM3 1422 aa9.02□□□□□ -0.97
SMARCA2-243ENST00000635590 TPP1O14773 563 aa9.02□□□□□ -0.97
SMARCA2-243ENST00000635590 CTNND1O60716 968 aaKnown RBP9.02□□□□□ -0.97
SMARCA2-243ENST00000635590 ULK1O75385 1050 aa9.02□□□□□ -0.97
SMARCA2-243ENST00000635590 RHOBTB3O94955 611 aa9.02□□□□□ -0.97
SMARCA2-243ENST00000635590 CFBP00751 764 aa9.02□□□□□ -0.97
SMARCA2-243ENST00000635590 GRK4P32298 578 aa9.02□□□□□ -0.97
SMARCA2-243ENST00000635590 TNP2Q05952 138 aa9.02□□□□□ -0.97
SMARCA2-243ENST00000635590 CATIPQ7Z7H3 387 aa9.02□□□□□ -0.97
SMARCA2-243ENST00000635590 ACRBPQ8NEB7 543 aa9.02□□□□□ -0.97
SMARCA2-243ENST00000635590 SNIP1Q8TAD8 396 aaKnown RBP9.02□□□□□ -0.97
SMARCA2-243ENST00000635590 SIN3AQ96ST3 1273 aa9.02□□□□□ -0.97
SMARCA2-243ENST00000635590 MKS1Q9NXB0 559 aa9.02□□□□□ -0.97
SMARCA2-243ENST00000635590 CLIC5Q9NZA1 410 aa9.02□□□□□ -0.97
SMARCA2-243ENST00000635590 POLG2Q9UHN1 485 aa9.02□□□□□ -0.97
SMARCA2-243ENST00000635590 RICTORQ6R327 1708 aa9.02□□□□□ -0.97
SMARCA2-243ENST00000635590 H3BRJ5 948 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 NOP56O00567 594 aaKnown RBP9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 AP1G1O43747 822 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 CCT5P48643 541 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 DDX10Q13206 875 aaKnown RBP9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 LAMC2Q13753 1193 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 SLC9A5Q14940 896 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 IFIT1BQ5T764 474 aaKnown RBP9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 LDHAL6AQ6ZMR3 332 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 DDX53Q86TM3 631 aaKnown RBP9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 TRIM59Q8IWR1 403 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 PHACTR4Q8IZ21 702 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 KCTD13Q8WZ19 329 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 SMARCC1Q92922 1105 aaPredicted RBP9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 ERP27Q96DN0 273 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 RSAD1Q9HA92 442 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 THG1LQ9NWX6 298 aaKnown RBP9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 RABGAP1Q9Y3P9 1069 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 PCDHGC4Q9Y5F7 938 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 MRFAP1Q9Y605 127 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 PTPN23Q9H3S7 1636 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 SUPT6HQ7KZ85 1726 aaKnown RBP9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 SAMD9Q5K651 1589 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 ZMYM4Q5VZL5 1548 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 RAPGEF6Q8TEU7 1601 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 PRAMEF27A3QJZ7 478 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 GAS7O60861 476 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 UBOX5O94941 541 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 ZRANB2O95218 330 aaKnown RBP eCLIP9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 MYBP10242 640 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 MAPTP10636 758 aaKnown RBP9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 PTPRAP18433 802 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 TNFAIP3P21580 790 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 DDIT3P35638 169 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 IKBKEQ14164 716 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 PLA2G4EQ3MJ16 856 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 RRP12Q5JTH9 1297 aaKnown RBP9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 MZT2AQ6P582 158 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 FIGNL1Q6PIW4 674 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 SLFN12Q8IYM2 578 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 FAM13CQ8NE31 585 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 ADAM19Q9H013 955 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 GBP3Q9H0R5 595 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 TRMT13Q9NUP7 481 aaKnown RBP9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 EMC9Q9Y3B6 208 aa9.01□□□□□ -0.97
SMARCA2-243ENST00000635590 DYRK1BQ9Y463 629 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms