RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 PNLIPP16233 465 aa3.92□□□□□ -1.78
PSPC1-208ENST00000635562 ARL4AP40617 200 aa3.92□□□□□ -1.78
PSPC1-208ENST00000635562 NMIQ13287 307 aaPredicted RBP3.92□□□□□ -1.78
PSPC1-208ENST00000635562 NBPF9Q3BBW0 867 aa3.92□□□□□ -1.78
PSPC1-208ENST00000635562 CCDC181Q5TID7 509 aa3.92□□□□□ -1.78
PSPC1-208ENST00000635562 DCAF15Q66K64 600 aa3.92□□□□□ -1.78
PSPC1-208ENST00000635562 SPATC1Q76KD6 591 aa3.92□□□□□ -1.78
PSPC1-208ENST00000635562 EEPD1Q7L9B9 569 aa3.92□□□□□ -1.78
PSPC1-208ENST00000635562 C7orf61Q8IZ16 206 aa3.92□□□□□ -1.78
PSPC1-208ENST00000635562 ZNF655Q8N720 491 aaPredicted RBP3.92□□□□□ -1.78
PSPC1-208ENST00000635562 SHISA4Q96DD7 197 aa3.92□□□□□ -1.78
PSPC1-208ENST00000635562 MAP6Q96JE9 813 aa3.92□□□□□ -1.78
PSPC1-208ENST00000635562 DNAJC7Q99615 494 aa3.92□□□□□ -1.78
PSPC1-208ENST00000635562 KANSL2Q9H9L4 492 aa3.92□□□□□ -1.78
PSPC1-208ENST00000635562 MBD1Q9UIS9 605 aaPredicted RBP3.92□□□□□ -1.78
PSPC1-208ENST00000635562 TMA7Q9Y2S6 64 aaKnown RBP3.92□□□□□ -1.78
PSPC1-208ENST00000635562 ZNF451Q9Y4E5 1061 aa3.92□□□□□ -1.78
PSPC1-208ENST00000635562 MRPL42Q9Y6G3 142 aaKnown RBP3.92□□□□□ -1.78
PSPC1-208ENST00000635562 ADAMTS20P59510 1910 aa3.91□□□□□ -1.78
PSPC1-208ENST00000635562 ANKRD34BA5PLL1 514 aa3.91□□□□□ -1.78
PSPC1-208ENST00000635562 N4BP3O15049 544 aa3.91□□□□□ -1.78
PSPC1-208ENST00000635562 ADCY3O60266 1144 aa3.91□□□□□ -1.78
PSPC1-208ENST00000635562 DIAPH1O60610 1272 aaKnown RBP3.91□□□□□ -1.78
PSPC1-208ENST00000635562 TRIM13O60858 407 aa3.91□□□□□ -1.78
PSPC1-208ENST00000635562 LRRN2O75325 713 aa3.91□□□□□ -1.78
PSPC1-208ENST00000635562 CD247P20963 164 aa3.91□□□□□ -1.78
PSPC1-208ENST00000635562 AFF3P51826 1226 aaKnown RBP3.91□□□□□ -1.78
PSPC1-208ENST00000635562 SRSF3P84103 164 aaKnown RBP3.91□□□□□ -1.78
PSPC1-208ENST00000635562 IFRD2Q12894 506 aaPredicted RBP3.91□□□□□ -1.78
PSPC1-208ENST00000635562 AUHQ13825 339 aaKnown RBP3.91□□□□□ -1.78
PSPC1-208ENST00000635562 FAM50AQ14320 339 aaKnown RBP3.91□□□□□ -1.78
PSPC1-208ENST00000635562 RALBP1Q15311 655 aa3.91□□□□□ -1.78
PSPC1-208ENST00000635562 EGFLAMQ63HQ2 1017 aa3.91□□□□□ -1.78
PSPC1-208ENST00000635562 SDE2Q6IQ49 451 aa3.91□□□□□ -1.78
PSPC1-208ENST00000635562 CCDC144CPQ8IYA2 1237 aa3.91□□□□□ -1.78
PSPC1-208ENST00000635562 NME8Q8N427 588 aa3.91□□□□□ -1.78
PSPC1-208ENST00000635562 DACT3Q96B18 629 aaPredicted RBP3.91□□□□□ -1.78
PSPC1-208ENST00000635562 G6PC3Q9BUM1 346 aa3.91□□□□□ -1.78
PSPC1-208ENST00000635562 UBA5Q9GZZ9 404 aa3.91□□□□□ -1.78
PSPC1-208ENST00000635562 GP6Q9HCN6 339 aa3.91□□□□□ -1.78
PSPC1-208ENST00000635562 TERF2IPQ9NYB0 399 aa3.91□□□□□ -1.78
PSPC1-208ENST00000635562 APEX2Q9UBZ4 518 aa3.91□□□□□ -1.78
PSPC1-208ENST00000635562 JAG2Q9Y219 1238 aa3.91□□□□□ -1.78
PSPC1-208ENST00000635562 A0A087WZG4 1122 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 SHISA3A0PJX4 238 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 CCDC85CA6NKD9 419 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 HMGB1P1B2RPK0 211 aaPredicted RBP3.9□□□□□ -1.79
PSPC1-208ENST00000635562 TP53P04637 393 aaPredicted RBP3.9□□□□□ -1.79
PSPC1-208ENST00000635562 CELA3BP08861 270 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 PI3P19957 117 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 RPL10P27635 214 aaKnown RBP3.9□□□□□ -1.79
PSPC1-208ENST00000635562 ERVFRD-1P60508 538 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 YBX1P67809 324 aaKnown RBP3.9□□□□□ -1.79
PSPC1-208ENST00000635562 SQSTM1Q13501 440 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 LAPTM5Q13571 262 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 SNW1Q13573 536 aaKnown RBP3.9□□□□□ -1.79
PSPC1-208ENST00000635562 SSPNQ14714 243 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 LONRF2Q1L5Z9 754 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 MTERF2Q49AM1 385 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 C2orf27AQ580R0 203 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 HEATR6Q6AI08 1181 aaKnown RBP3.9□□□□□ -1.79
PSPC1-208ENST00000635562 GALNT18Q6P9A2 607 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 CEP128Q6ZU80 1094 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 WAPLQ7Z5K2 1190 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 LINC00116Q8NCU8 138 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 MORC4Q8TE76 937 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 SH3TC2Q8TF17 1288 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 THAP3Q8WTV1 239 aaPredicted RBP3.9□□□□□ -1.79
PSPC1-208ENST00000635562 RCC1LQ96I51 464 aaKnown RBP3.9□□□□□ -1.79
PSPC1-208ENST00000635562 FCRL2Q96LA5 508 aaPredicted RBP3.9□□□□□ -1.79
PSPC1-208ENST00000635562 MRGPRX3Q96LB0 322 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 APBA2Q99767 749 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 SPATA9Q9BWV2 254 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 HDAC8Q9BY41 377 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 PRDM14Q9GZV8 571 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 MKRN2Q9H000 416 aaKnown RBP3.9□□□□□ -1.79
PSPC1-208ENST00000635562 METTL14Q9HCE5 456 aaKnown RBP3.9□□□□□ -1.79
PSPC1-208ENST00000635562 TMEM260Q9NX78 707 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 WHRNQ9P202 907 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 MAGEC2Q9UBF1 373 aaPredicted RBP3.9□□□□□ -1.79
PSPC1-208ENST00000635562 TNFRSF10DQ9UBN6 386 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 EBF1Q9UH73 591 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 TCFL5Q9UL49 500 aa3.9□□□□□ -1.79
PSPC1-208ENST00000635562 A0A1W2PQU0 124 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 ZC3H12DA2A288 527 aaKnown RBP3.89□□□□□ -1.79
PSPC1-208ENST00000635562 WTIPA6NIX2 430 aaPredicted RBP3.89□□□□□ -1.79
PSPC1-208ENST00000635562 IRS4O14654 1257 aaPredicted RBP3.89□□□□□ -1.79
PSPC1-208ENST00000635562 USP2O75604 605 aaPredicted RBP3.89□□□□□ -1.79
PSPC1-208ENST00000635562 MPOP05164 745 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 NAT2P11245 290 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 VIPR1P32241 457 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 ZNF445P59923 1031 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 CAP1Q01518 475 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 TCEAL1Q15170 157 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 PLEKHG4Q58EX7 1191 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 TMC3Q7Z5M5 1100 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 APBB1IPQ7Z5R6 666 aaPredicted RBP3.89□□□□□ -1.79
PSPC1-208ENST00000635562 SMC5Q8IY18 1101 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 ARHGEF39Q8N4T4 335 aa3.89□□□□□ -1.79
PSPC1-208ENST00000635562 TCTN2Q96GX1 697 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms