RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, human

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCB1-208	ENST00000634926	SMAD4	Q13485	552 aa	Known RBP	4.04	□□□□□ -1.76
SMARCB1-208	ENST00000634926	BICRAL	Q6AI39	1079 aa		4.04	□□□□□ -1.76
SMARCB1-208	ENST00000634926	TMEM192	Q8IY95	271 aa		4.04	□□□□□ -1.76
SMARCB1-208	ENST00000634926	CHST13	Q8NET6	341 aa		4.04	□□□□□ -1.76
SMARCB1-208	ENST00000634926	RHOV	Q96L33	236 aa		4.04	□□□□□ -1.76
SMARCB1-208	ENST00000634926	SLC12A9	Q9BXP2	914 aa		4.04	□□□□□ -1.76
SMARCB1-208	ENST00000634926	VPS11	Q9H270	941 aa		4.04	□□□□□ -1.76
SMARCB1-208	ENST00000634926	FAN1	Q9Y2M0	1017 aa		4.04	□□□□□ -1.76
SMARCB1-208	ENST00000634926	CTSH	P09668	335 aa		4.03	□□□□□ -1.76
SMARCB1-208	ENST00000634926	GART	P22102	1010 aa		4.03	□□□□□ -1.76
SMARCB1-208	ENST00000634926	FAM160A1	Q05DH4	1040 aa		4.03	□□□□□ -1.76
SMARCB1-208	ENST00000634926	REC114	Q7Z4M0	266 aa		4.03	□□□□□ -1.76
SMARCB1-208	ENST00000634926	WWC2-AS2	Q96NR7	200 aa		4.03	□□□□□ -1.76
SMARCB1-208	ENST00000634926	PPP4R1L	Q9P1A2	415 aa		4.03	□□□□□ -1.76
SMARCB1-208	ENST00000634926	SHOX	O15266	292 aa		4.02	□□□□□ -1.77
SMARCB1-208	ENST00000634926	ACR	P10323	421 aa		4.02	□□□□□ -1.77
SMARCB1-208	ENST00000634926	RAG1	P15918	1043 aa		4.02	□□□□□ -1.77
SMARCB1-208	ENST00000634926	RGL3	Q3MIN7	710 aa		4.02	□□□□□ -1.77
SMARCB1-208	ENST00000634926	IGFL4	Q6B9Z1	124 aa		4.02	□□□□□ -1.77
SMARCB1-208	ENST00000634926	OVOS1	Q6IE37	1185 aa		4.02	□□□□□ -1.77
SMARCB1-208	ENST00000634926	ALG3	Q92685	438 aa		4.02	□□□□□ -1.77
SMARCB1-208	ENST00000634926	ZBTB8A	Q96BR9	441 aa		4.02	□□□□□ -1.77
SMARCB1-208	ENST00000634926	FRMD6	Q96NE9	622 aa		4.02	□□□□□ -1.77
SMARCB1-208	ENST00000634926	NOC4L	Q9BVI4	516 aa	Known RBP	4.02	□□□□□ -1.77
SMARCB1-208	ENST00000634926	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	4.02	□□□□□ -1.77
SMARCB1-208	ENST00000634926	PDLIM7	Q9NR12	457 aa		4.02	□□□□□ -1.77
SMARCB1-208	ENST00000634926	NTM	Q9P121	344 aa		4.02	□□□□□ -1.77
SMARCB1-208	ENST00000634926	MAPKBP1	O60336	1514 aa		4.01	□□□□□ -1.77
SMARCB1-208	ENST00000634926	TLR3	O15455	904 aa	Known RBP	4.01	□□□□□ -1.77
SMARCB1-208	ENST00000634926	GSTM1	P09488	218 aa		4.01	□□□□□ -1.77
SMARCB1-208	ENST00000634926	GLI4	P10075	376 aa		4.01	□□□□□ -1.77
SMARCB1-208	ENST00000634926	R3HDM1	Q15032	1099 aa	Known RBP	4.01	□□□□□ -1.77
SMARCB1-208	ENST00000634926	CYB5RL	Q6IPT4	315 aa		4.01	□□□□□ -1.77
SMARCB1-208	ENST00000634926	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	4.01	□□□□□ -1.77
SMARCB1-208	ENST00000634926	LINC00482	Q8N8I6	264 aa		4.01	□□□□□ -1.77
SMARCB1-208	ENST00000634926	DDX11	Q96FC9	970 aa		4.01	□□□□□ -1.77
SMARCB1-208	ENST00000634926	DUSP9	Q99956	384 aa	Known RBP	4.01	□□□□□ -1.77
SMARCB1-208	ENST00000634926	GORASP1	Q9BQQ3	440 aa		4.01	□□□□□ -1.77
SMARCB1-208	ENST00000634926	KLC2	Q9H0B6	622 aa		4.01	□□□□□ -1.77
SMARCB1-208	ENST00000634926	ANTXR1	Q9H6X2	564 aa		4.01	□□□□□ -1.77
SMARCB1-208	ENST00000634926	ADCY10	Q96PN6	1610 aa		4.01	□□□□□ -1.77
SMARCB1-208	ENST00000634926	FHAD1	B1AJZ9	1412 aa		4.01	□□□□□ -1.77
SMARCB1-208	ENST00000634926	DIP2B	Q9P265	1576 aa		4.01	□□□□□ -1.77
SMARCB1-208	ENST00000634926	ANKRD33B	A6NCL7	494 aa		4	□□□□□ -1.77
SMARCB1-208	ENST00000634926	UNCX	A6NJT0	531 aa		4	□□□□□ -1.77
SMARCB1-208	ENST00000634926	FGF10	O15520	208 aa	Predicted RBP	4	□□□□□ -1.77
SMARCB1-208	ENST00000634926	GPR42	O15529	346 aa		4	□□□□□ -1.77
SMARCB1-208	ENST00000634926	PPP1R11	O60927	126 aa	Predicted RBP	4	□□□□□ -1.77
SMARCB1-208	ENST00000634926	CHMP4BP1	P59074	171 aa		4	□□□□□ -1.77
SMARCB1-208	ENST00000634926	CDCP2	Q5VXM1	449 aa		4	□□□□□ -1.77
SMARCB1-208	ENST00000634926	C9orf131	Q5VYM1	1079 aa		4	□□□□□ -1.77
SMARCB1-208	ENST00000634926	PALM2	Q8IXS6	379 aa		4	□□□□□ -1.77
SMARCB1-208	ENST00000634926	KISS1R	Q969F8	398 aa	Predicted RBP	4	□□□□□ -1.77
SMARCB1-208	ENST00000634926	ATG4C	Q96DT6	458 aa		4	□□□□□ -1.77
SMARCB1-208	ENST00000634926	WRN	Q14191	1432 aa	Predicted RBP eCLIP	4	□□□□□ -1.77
SMARCB1-208	ENST00000634926		A0A1W2PQ27	194 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926		A0A1W2PQ64	194 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926		A0A1W2PQC6	194 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926		A0A1W2PQD8	194 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926		H0Y8X5	98 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	B4GALT3	O60512	393 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	PRPF40A	O75400	957 aa	Known RBP	3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	CLEC3A	O75596	197 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	C8B	P07358	591 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	AUH	Q13825	339 aa	Known RBP	3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	TAF1C	Q15572	869 aa	Predicted RBP	3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	HLA-DQA1	Q5Y7H0	255 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	ZNF585A	Q6P3V2	769 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	STK32C	Q86UX6	486 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	JAML	Q86YT9	394 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	GOLM1	Q8NBJ4	401 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	DNER	Q8NFT8	737 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	PTPN18	Q99952	460 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	BCL2L13	Q9BXK5	485 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	CNNM2	Q9H8M5	875 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	BRMS1	Q9HCU9	246 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	GMIP	Q9P107	970 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	FBXL21	Q9UKT6	434 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	PCDHB14	Q9Y5E9	798 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	CUL7	Q14999	1698 aa		3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	PPRC1	Q5VV67	1664 aa	Known RBP	3.99	□□□□□ -1.77
SMARCB1-208	ENST00000634926	ZNF536	O15090	1300 aa		3.98	□□□□□ -1.77
SMARCB1-208	ENST00000634926		C9IYK1	514 aa		3.98	□□□□□ -1.77
SMARCB1-208	ENST00000634926	RLBP1	P12271	317 aa		3.98	□□□□□ -1.77
SMARCB1-208	ENST00000634926	ZNF16	P17020	682 aa	Predicted RBP	3.98	□□□□□ -1.77
SMARCB1-208	ENST00000634926	THBS2	P35442	1172 aa		3.98	□□□□□ -1.77
SMARCB1-208	ENST00000634926	CACNB2	Q08289	660 aa	Predicted RBP	3.98	□□□□□ -1.77
SMARCB1-208	ENST00000634926	MPP2	Q14168	576 aa		3.98	□□□□□ -1.77
SMARCB1-208	ENST00000634926	MCTP2	Q6DN12	878 aa		3.98	□□□□□ -1.77
SMARCB1-208	ENST00000634926	GLB1L	Q6UWU2	654 aa		3.98	□□□□□ -1.77
SMARCB1-208	ENST00000634926	ZNF575	Q86XF7	245 aa		3.98	□□□□□ -1.77
SMARCB1-208	ENST00000634926	LGI4	Q8N135	537 aa		3.98	□□□□□ -1.77
SMARCB1-208	ENST00000634926	NAT16	Q8N8M0	369 aa		3.98	□□□□□ -1.77
SMARCB1-208	ENST00000634926	CPA5	Q8WXQ8	436 aa		3.98	□□□□□ -1.77
SMARCB1-208	ENST00000634926	TSPAN17	Q96FV3	270 aa		3.98	□□□□□ -1.77
SMARCB1-208	ENST00000634926	TMEM74	Q96NL1	305 aa		3.98	□□□□□ -1.77
SMARCB1-208	ENST00000634926	C11orf21	Q9P2W6	132 aa		3.98	□□□□□ -1.77
SMARCB1-208	ENST00000634926	DBR1	Q9UK59	544 aa	Known RBP	3.98	□□□□□ -1.77
SMARCB1-208	ENST00000634926	PCDHB12	Q9Y5F1	795 aa		3.98	□□□□□ -1.77
SMARCB1-208	ENST00000634926	TNFRSF18	Q9Y5U5	241 aa		3.98	□□□□□ -1.77

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