RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 CYP17A1P05093 508 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 PARP1P09874 1014 aaKnown RBP5.55□□□□□ -1.52
SDCBP-213ENST00000630925 AKR1B1P15121 316 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 PRPHP41219 470 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 ZAP70P43403 619 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 LIMK1P53667 647 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 LMNB2Q03252 620 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 MRPL28Q13084 256 aaKnown RBP5.55□□□□□ -1.52
SDCBP-213ENST00000630925 EIF2B5Q13144 721 aaKnown RBP5.55□□□□□ -1.52
SDCBP-213ENST00000630925 TERF2Q15554 542 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 C6orf15Q6UXA7 325 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-213ENST00000630925 NLRP14Q86W24 1093 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 GALNT12Q8IXK2 581 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 ADAM32Q8TC27 787 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 EXOC2Q96KP1 924 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 CCDC138Q96M89 665 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 ADPGKQ9BRR6 497 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 NIFKQ9BYG3 293 aaKnown RBP5.55□□□□□ -1.52
SDCBP-213ENST00000630925 ADAM33Q9BZ11 813 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 FANCFQ9NPI8 374 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 CRTAC1Q9NQ79 661 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 LRRC4BQ9NT99 713 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 CHCHD3Q9NX63 227 aaKnown RBP5.55□□□□□ -1.52
SDCBP-213ENST00000630925 CPSF2Q9P2I0 782 aaKnown RBP5.55□□□□□ -1.52
SDCBP-213ENST00000630925 SUCOQ9UBS9 1254 aaKnown RBP5.55□□□□□ -1.52
SDCBP-213ENST00000630925 FBXL5Q9UKA1 691 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 TMEM98Q9Y2Y6 226 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 A0A0G2JS52 829 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 INO80B-WBP1J3KQ70 363 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 TPP1O14773 563 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 CTAGE5O15320 804 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 COBLO75128 1261 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 APBB3O95704 486 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 APBA3O96018 575 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 MSL3P1P0C860 447 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 POU3F2P20265 443 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-213ENST00000630925 MX2P20592 715 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 L1CAMP32004 1257 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 SLC20A2Q08357 652 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 LRRC74AQ0VAA2 488 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 FUT2Q10981 343 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 MUM1Q2TAK8 710 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 INAVAQ3KP66 663 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 METTL24Q5JXM2 366 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 SYDE1Q6ZW31 735 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-213ENST00000630925 ANKRD18AQ8IVF6 992 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 MAP4K3Q8IVH8 894 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 ETFBKMTQ8IXQ9 262 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 TRMT2AQ8IZ69 625 aaKnown RBP5.54□□□□□ -1.52
SDCBP-213ENST00000630925 GSDMBQ8TAX9 411 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 DEPTORQ8TB45 409 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 ZNF606Q8WXB4 792 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 ZNF75CPQ92670 426 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-213ENST00000630925 FUBP3Q96I24 572 aaKnown RBP eCLIP5.54□□□□□ -1.523e-11■■■■■ 48.5
SDCBP-213ENST00000630925 ZNF396Q96N95 335 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-213ENST00000630925 TSPAN10Q9H1Z9 355 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-213ENST00000630925 DEF6Q9H4E7 631 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 TRPV4Q9HBA0 871 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 MTRRQ9UBK8 725 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 ZMAT5Q9UDW3 170 aaKnown RBP5.54□□□□□ -1.52
SDCBP-213ENST00000630925 GPR34Q9UPC5 381 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 GIT1Q9Y2X7 761 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 UACAQ9BZF9 1416 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 FER1L4A9Z1Z3 1794 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 C17orf113A0A1B0GUU1 675 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 A6NHS1 94 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 TRIM75PA6NK02 468 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 C2orf81A6NN90 581 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 TMEM229AB2RXF0 380 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 H3BRJ5 948 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 NEMP1O14524 444 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 MUSKO15146 869 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 SNUPNO95149 360 aaKnown RBP5.54□□□□□ -1.52
SDCBP-213ENST00000630925 LTFP02788 710 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 P4HA1P13674 534 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 RPS2P15880 293 aaKnown RBP5.54□□□□□ -1.52
SDCBP-213ENST00000630925 GRIK1P39086 918 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 ID4P47928 161 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 EPHA4P54764 986 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 GRB10Q13322 594 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 ODF1Q14990 250 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 NCOA1Q15788 1441 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 SETMARQ53H47 684 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-213ENST00000630925 CCDC30Q5VVM6 783 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 MFSD6Q6ZSS7 791 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 CEP68Q76N32 757 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 SLC44A2Q8IWA5 706 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-213ENST00000630925 TNS4Q8IZW8 715 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 OR6P1Q8NGX9 317 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 SLC30A5Q8TAD4 765 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 BRSK1Q8TDC3 778 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 PLD4Q96BZ4 506 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 ALPK1Q96QP1 1244 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 MPHOSPH8Q99549 860 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 GGNBP2Q9H3C7 697 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 RWDD1Q9H446 243 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-213ENST00000630925 SMOC1Q9H4F8 434 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 PLSCR4Q9NRQ2 329 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 C1orf112Q9NSG2 853 aa5.54□□□□□ -1.52
SDCBP-213ENST00000630925 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms