RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 C22orf23Q9BZE7 217 aa9.01□□□□□ -0.97
NR1I3-235ENST00000628566 UPF3BQ9BZI7 483 aaKnown RBP9.01□□□□□ -0.97
NR1I3-235ENST00000628566 ALDH8A1Q9H2A2 487 aaPredicted RBP9.01□□□□□ -0.97
NR1I3-235ENST00000628566 ABHD16BQ9H3Z7 469 aa9.01□□□□□ -0.97
NR1I3-235ENST00000628566 EHMT1Q9H9B1 1298 aa9.01□□□□□ -0.97
NR1I3-235ENST00000628566 SPC25Q9HBM1 224 aa9.01□□□□□ -0.97
NR1I3-235ENST00000628566 PAK6Q9NQU5 681 aaPredicted RBP9.01□□□□□ -0.97
NR1I3-235ENST00000628566 DDX20Q9UHI6 824 aaKnown RBP9.01□□□□□ -0.97
NR1I3-235ENST00000628566 BRPF3Q9ULD4 1205 aa9.01□□□□□ -0.97
NR1I3-235ENST00000628566 FAM184BQ9ULE4 1060 aa9.01□□□□□ -0.97
NR1I3-235ENST00000628566 MYH6P13533 1939 aa9□□□□□ -0.97
NR1I3-235ENST00000628566 RBBP6Q7Z6E9 1792 aaKnown RBP9□□□□□ -0.97
NR1I3-235ENST00000628566 CYTH3O43739 400 aa9□□□□□ -0.97
NR1I3-235ENST00000628566 PLEKHA8P1O95397 391 aa9□□□□□ -0.97
NR1I3-235ENST00000628566 RARBP10826 455 aa9□□□□□ -0.97
NR1I3-235ENST00000628566 EVCP57679 992 aa9□□□□□ -0.97
NR1I3-235ENST00000628566 PDE4DQ08499 809 aa9□□□□□ -0.97
NR1I3-235ENST00000628566 ARHGEF16Q5VV41 709 aa9□□□□□ -0.97
NR1I3-235ENST00000628566 PPP1R18Q6NYC8 613 aa9□□□□□ -0.97
NR1I3-235ENST00000628566 ARMCX2Q7L311 632 aa9□□□□□ -0.97
NR1I3-235ENST00000628566 RAB11FIP4Q86YS3 637 aa9□□□□□ -0.97
NR1I3-235ENST00000628566 CCDC82Q8N4S0 544 aa9□□□□□ -0.97
NR1I3-235ENST00000628566 SRBD1Q8N5C6 995 aaKnown RBP9□□□□□ -0.97
NR1I3-235ENST00000628566 ARRDC4Q8NCT1 418 aa9□□□□□ -0.97
NR1I3-235ENST00000628566 SMARCC2Q8TAQ2 1214 aa9□□□□□ -0.97
NR1I3-235ENST00000628566 NSUN6Q8TEA1 469 aaKnown RBP9□□□□□ -0.97
NR1I3-235ENST00000628566 CLEC4DQ8WXI8 215 aa9□□□□□ -0.97
NR1I3-235ENST00000628566 PIBF1Q8WXW3 757 aa9□□□□□ -0.97
NR1I3-235ENST00000628566 IWS1Q96ST2 819 aa9□□□□□ -0.97
NR1I3-235ENST00000628566 SLKQ9H2G2 1235 aaPredicted RBP9□□□□□ -0.97
NR1I3-235ENST00000628566 CDKN2AIPQ9NXV6 580 aaPredicted RBP9□□□□□ -0.97
NR1I3-235ENST00000628566 FLRT1Q9NZU1 646 aa9□□□□□ -0.97
NR1I3-235ENST00000628566 ZHX1Q9UKY1 873 aaPredicted RBP9□□□□□ -0.97
NR1I3-235ENST00000628566 DOCK3Q8IZD9 2030 aa9□□□□□ -0.97
NR1I3-235ENST00000628566 PLXNA1Q9UIW2 1896 aa9□□□□□ -0.97
NR1I3-235ENST00000628566 NID2Q14112 1375 aa8.99□□□□□ -0.97
NR1I3-235ENST00000628566 ZNFX1Q9P2E3 1918 aaKnown RBP8.99□□□□□ -0.97
NR1I3-235ENST00000628566 ST18O60284 1047 aa8.99□□□□□ -0.97
NR1I3-235ENST00000628566 CYBAP13498 195 aa8.99□□□□□ -0.97
NR1I3-235ENST00000628566 PDIA3P30101 505 aaKnown RBP8.99□□□□□ -0.97
NR1I3-235ENST00000628566 CCND3P30281 292 aaPredicted RBP8.99□□□□□ -0.97
NR1I3-235ENST00000628566 ALDH5A1P51649 535 aaPredicted RBP8.99□□□□□ -0.97
NR1I3-235ENST00000628566 NEK4P51957 841 aa8.99□□□□□ -0.97
NR1I3-235ENST00000628566 CNTN2Q02246 1040 aa8.99□□□□□ -0.97
NR1I3-235ENST00000628566 TRIM32Q13049 653 aa8.99□□□□□ -0.97
NR1I3-235ENST00000628566 ACVR2BQ13705 512 aa8.99□□□□□ -0.97
NR1I3-235ENST00000628566 MCTP2Q6DN12 878 aa8.99□□□□□ -0.97
NR1I3-235ENST00000628566 SLC30A10Q6XR72 485 aa8.99□□□□□ -0.97
NR1I3-235ENST00000628566 NOL8Q76FK4 1167 aaKnown RBP8.99□□□□□ -0.97
NR1I3-235ENST00000628566 HEATR3Q7Z4Q2 680 aa8.99□□□□□ -0.97
NR1I3-235ENST00000628566 CCDC148Q8NFR7 591 aa8.99□□□□□ -0.97
NR1I3-235ENST00000628566 IL17RAQ96F46 866 aa8.99□□□□□ -0.97
NR1I3-235ENST00000628566 RMDN3Q96TC7 470 aa8.99□□□□□ -0.97
NR1I3-235ENST00000628566 HTATIP2Q9BUP3 242 aa8.99□□□□□ -0.97
NR1I3-235ENST00000628566 RNF26Q9BY78 433 aaPredicted RBP8.99□□□□□ -0.97
NR1I3-235ENST00000628566 VTA1Q9NP79 307 aa8.99□□□□□ -0.97
NR1I3-235ENST00000628566 POTEFA5A3E0 1075 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 SOWAHBA6NEL2 793 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 SPDYE3A6NKU9 549 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 KBTBD13C9JR72 458 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 FARP2O94887 1054 aaPredicted RBP8.98□□□□□ -0.97
NR1I3-235ENST00000628566 SEC24BO95487 1268 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 IFNAR1P17181 557 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 XBP1P17861 261 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 EN2P19622 333 aaPredicted RBP8.98□□□□□ -0.97
NR1I3-235ENST00000628566 ADD1P35611 737 aaKnown RBP8.98□□□□□ -0.97
NR1I3-235ENST00000628566 RBM25P49756 843 aaKnown RBP8.98□□□□□ -0.97
NR1I3-235ENST00000628566 RGS19P49795 217 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 HSD17B4P51659 736 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 NAPAP54920 295 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 GHRHRQ02643 423 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 MLLT1Q03111 559 aaPredicted RBP8.98□□□□□ -0.97
NR1I3-235ENST00000628566 SSRP1Q08945 709 aaKnown RBP8.98□□□□□ -0.97
NR1I3-235ENST00000628566 TOB2Q14106 344 aaPredicted RBP8.98□□□□□ -0.97
NR1I3-235ENST00000628566 RABEP1Q15276 862 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 STXBP2Q15833 593 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 BRDTQ58F21 947 aaPredicted RBP8.98□□□□□ -0.97
NR1I3-235ENST00000628566 IQSEC1Q6DN90 963 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 NECAB2Q7Z6G3 386 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 RNF180Q86T96 592 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 FAM177A1Q8N128 213 aaPredicted RBP8.98□□□□□ -0.97
NR1I3-235ENST00000628566 CMTR1Q8N1G2 835 aaKnown RBP8.98□□□□□ -0.97
NR1I3-235ENST00000628566 BICD2Q8TD16 824 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 SYTL5Q8TDW5 730 aaPredicted RBP8.98□□□□□ -0.97
NR1I3-235ENST00000628566 WASF1Q92558 559 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 CRISPLD2Q9H0B8 497 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 PSTPIP2Q9H939 334 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 XPNPEP3Q9NQH7 507 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 OGDHLQ9ULD0 1010 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 V9GY48 417 aaPredicted RBP8.98□□□□□ -0.97
NR1I3-235ENST00000628566 CNTNAP5Q8WYK1 1306 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 HTTP42858 3142 aa8.98□□□□□ -0.97
NR1I3-235ENST00000628566 PIK3CDO00329 1044 aa8.97□□□□□ -0.97
NR1I3-235ENST00000628566 NKRFO15226 690 aaKnown RBP eCLIP8.97□□□□□ -0.97
NR1I3-235ENST00000628566 PRPF3O43395 683 aaKnown RBP8.97□□□□□ -0.97
NR1I3-235ENST00000628566 ZEB2O60315 1214 aa8.97□□□□□ -0.97
NR1I3-235ENST00000628566 PPP1R11O60927 126 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-235ENST00000628566 DUSP11O75319 330 aaKnown RBP8.97□□□□□ -0.97
NR1I3-235ENST00000628566 STAM2O75886 525 aa8.97□□□□□ -0.97
NR1I3-235ENST00000628566 DEXIO95424 95 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms