RNA–Protein interactions for RNA: ENST00000628176.2

MECP2-217, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3 BASIC

Gene MECP2, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-217ENST00000628176 GPAT2Q6NUI2 795 aa16.11■□□□□ 0.17
MECP2-217ENST00000628176 KIF18AQ8NI77 898 aa16.11■□□□□ 0.17
MECP2-217ENST00000628176 RPAP3Q9H6T3 665 aaPredicted RBP16.11■□□□□ 0.17
MECP2-217ENST00000628176 C19orf81C9J6K1 198 aa16.1■□□□□ 0.17
MECP2-217ENST00000628176 CBFA2T2O43439 604 aa16.1■□□□□ 0.17
MECP2-217ENST00000628176 SNHG28P0DPA3 235 aa16.1■□□□□ 0.17
MECP2-217ENST00000628176 ZBTB48P10074 688 aaPredicted RBP16.1■□□□□ 0.17
MECP2-217ENST00000628176 BMP3P12645 472 aa16.1■□□□□ 0.17
MECP2-217ENST00000628176 SYKP43405 635 aa16.1■□□□□ 0.17
MECP2-217ENST00000628176 VEGFBP49765 207 aa16.1■□□□□ 0.17
MECP2-217ENST00000628176 GRM4Q14833 912 aa16.1■□□□□ 0.17
MECP2-217ENST00000628176 SH3D19Q5HYK7 790 aa16.1■□□□□ 0.17
MECP2-217ENST00000628176 FILIP1Q7Z7B0 1213 aa16.1■□□□□ 0.17
MECP2-217ENST00000628176 ERO1AQ96HE7 468 aa16.1■□□□□ 0.17
MECP2-217ENST00000628176 TMOD4Q9NZQ9 345 aa16.1■□□□□ 0.17
MECP2-217ENST00000628176 OGFRQ9NZT2 677 aa16.1■□□□□ 0.17
MECP2-217ENST00000628176 LOC285556D6RIA3 1793 aa16.1■□□□□ 0.17
MECP2-217ENST00000628176 RLFQ13129 1914 aa16.09■□□□□ 0.17
MECP2-217ENST00000628176 hCG_1642624A0A1W2PR95 340 aa16.09■□□□□ 0.17
MECP2-217ENST00000628176 BTBD19C9JJ37 291 aa16.09■□□□□ 0.17
MECP2-217ENST00000628176 TMEM232C9JQI7 657 aa16.09■□□□□ 0.17
MECP2-217ENST00000628176 GNAQP50148 359 aa16.09■□□□□ 0.17
MECP2-217ENST00000628176 GTF2A2P52657 109 aa16.09■□□□□ 0.17
MECP2-217ENST00000628176 USP14P54578 494 aa16.09■□□□□ 0.17
MECP2-217ENST00000628176 ZNF543Q08ER8 600 aa16.09■□□□□ 0.17
MECP2-217ENST00000628176 ARID5BQ14865 1188 aa16.09■□□□□ 0.17
MECP2-217ENST00000628176 TANGO6Q9C0B7 1094 aa16.09■□□□□ 0.17
MECP2-217ENST00000628176 XPO4Q9C0E2 1151 aaKnown RBP16.09■□□□□ 0.17
MECP2-217ENST00000628176 L2HGDHQ9H9P8 463 aa16.09■□□□□ 0.17
MECP2-217ENST00000628176 VAT1LQ9HCJ6 419 aa16.09■□□□□ 0.17
MECP2-217ENST00000628176 PALM3A6NDB9 673 aaPredicted RBP16.08■□□□□ 0.17
MECP2-217ENST00000628176 IGF2BP3O00425 579 aaKnown RBP eCLIP16.08■□□□□ 0.17
MECP2-217ENST00000628176 PARP1P09874 1014 aaKnown RBP16.08■□□□□ 0.17
MECP2-217ENST00000628176 HSPA6P17066 643 aa16.08■□□□□ 0.17
MECP2-217ENST00000628176 TAL1P17542 331 aaPredicted RBP16.08■□□□□ 0.17
MECP2-217ENST00000628176 SFPQP23246 707 aaKnown RBP eCLIP16.08■□□□□ 0.17
MECP2-217ENST00000628176 SRBD1Q8N5C6 995 aaKnown RBP16.08■□□□□ 0.17
MECP2-217ENST00000628176 CCDC102AQ96A19 550 aa16.08■□□□□ 0.17
MECP2-217ENST00000628176 GMCL1Q96IK5 515 aa16.08■□□□□ 0.17
MECP2-217ENST00000628176 PARP14Q460N5 1801 aa16.08■□□□□ 0.16
MECP2-217ENST00000628176 USP27XA6NNY8 438 aa16.08■□□□□ 0.16
MECP2-217ENST00000628176 ZSCAN20P17040 1043 aaPredicted RBP16.08■□□□□ 0.16
MECP2-217ENST00000628176 IFNAR1P17181 557 aa16.08■□□□□ 0.16
MECP2-217ENST00000628176 MYL5Q02045 173 aa16.08■□□□□ 0.16
MECP2-217ENST00000628176 DMTNQ08495 405 aa16.08■□□□□ 0.16
MECP2-217ENST00000628176 TRIM29Q14134 588 aa16.08■□□□□ 0.16
MECP2-217ENST00000628176 ASPRV1Q53RT3 343 aa16.08■□□□□ 0.16
MECP2-217ENST00000628176 GPATCH4Q5T3I0 446 aaKnown RBP16.08■□□□□ 0.16
MECP2-217ENST00000628176 SHC4Q6S5L8 630 aa16.08■□□□□ 0.16
MECP2-217ENST00000628176 FCHSD1Q86WN1 690 aa16.08■□□□□ 0.16
MECP2-217ENST00000628176 DCAF4Q8WV16 495 aa16.08■□□□□ 0.16
MECP2-217ENST00000628176 HHIPL1Q96JK4 782 aa16.08■□□□□ 0.16
MECP2-217ENST00000628176 C12orf42Q96LP6 360 aa16.08■□□□□ 0.16
MECP2-217ENST00000628176 LZTS2Q9BRK4 669 aa16.08■□□□□ 0.16
MECP2-217ENST00000628176 IFNKQ9P0W0 207 aa16.08■□□□□ 0.16
MECP2-217ENST00000628176 KLRF2D3W0D1 207 aa16.07■□□□□ 0.16
MECP2-217ENST00000628176 CYTH3O43739 400 aa16.07■□□□□ 0.16
MECP2-217ENST00000628176 FMNL1O95466 1100 aaPredicted RBP16.07■□□□□ 0.16
MECP2-217ENST00000628176 CYP2C8P10632 490 aa16.07■□□□□ 0.16
MECP2-217ENST00000628176 CETPP11597 493 aa16.07■□□□□ 0.16
MECP2-217ENST00000628176 FANCCQ00597 558 aa16.07■□□□□ 0.16
MECP2-217ENST00000628176 IKQ13123 557 aaPredicted RBP16.07■□□□□ 0.16
MECP2-217ENST00000628176 E4F1Q66K89 784 aaPredicted RBP16.07■□□□□ 0.16
MECP2-217ENST00000628176 ARMCX5Q6P1M9 558 aa16.07■□□□□ 0.16
MECP2-217ENST00000628176 POTEEQ6S8J3 1075 aa16.07■□□□□ 0.16
MECP2-217ENST00000628176 TRIM22Q8IYM9 498 aa16.07■□□□□ 0.16
MECP2-217ENST00000628176 LPAR1Q92633 364 aa16.07■□□□□ 0.16
MECP2-217ENST00000628176 PHKBQ93100 1093 aa16.07■□□□□ 0.16
MECP2-217ENST00000628176 KIFC2Q96AC6 838 aa16.07■□□□□ 0.16
MECP2-217ENST00000628176 HSD3B7Q9H2F3 369 aa16.07■□□□□ 0.16
MECP2-217ENST00000628176 HOOK1Q9UJC3 728 aaKnown RBP16.07■□□□□ 0.16
MECP2-217ENST00000628176 PRDM4Q9UKN5 801 aa16.07■□□□□ 0.16
MECP2-217ENST00000628176 WDR46O15213 610 aaKnown RBP16.06■□□□□ 0.16
MECP2-217ENST00000628176 FLOT1O75955 427 aa16.06■□□□□ 0.16
MECP2-217ENST00000628176 CATSPERGQ6ZRH7 1159 aa16.06■□□□□ 0.16
MECP2-217ENST00000628176 ZNF579Q8NAF0 562 aaKnown RBP16.06■□□□□ 0.16
MECP2-217ENST00000628176 P2RX7Q99572 595 aaKnown RBP16.06■□□□□ 0.16
MECP2-217ENST00000628176 TMX1Q9H3N1 280 aa16.06■□□□□ 0.16
MECP2-217ENST00000628176 DDX41Q9UJV9 622 aaKnown RBP16.06■□□□□ 0.16
MECP2-217ENST00000628176 COL11A1P12107 1806 aaPredicted RBP16.06■□□□□ 0.16
MECP2-217ENST00000628176 PDHXO00330 501 aa16.05■□□□□ 0.16
MECP2-217ENST00000628176 SMC2O95347 1197 aa16.05■□□□□ 0.16
MECP2-217ENST00000628176 SMARCA1P28370 1054 aa16.05■□□□□ 0.16
MECP2-217ENST00000628176 SSRP1Q08945 709 aaKnown RBP16.05■□□□□ 0.16
MECP2-217ENST00000628176 CT47A1Q5JQC4 288 aaPredicted RBP16.05■□□□□ 0.16
MECP2-217ENST00000628176 NT5DC1Q5TFE4 455 aa16.05■□□□□ 0.16
MECP2-217ENST00000628176 TMTC3Q6ZXV5 915 aa16.05■□□□□ 0.16
MECP2-217ENST00000628176 FASTKD5Q7L8L6 764 aaKnown RBP16.05■□□□□ 0.16
MECP2-217ENST00000628176 PROCA1Q8NCQ7 364 aaPredicted RBP16.05■□□□□ 0.16
MECP2-217ENST00000628176 ZNF397Q8NF99 534 aaPredicted RBP16.05■□□□□ 0.16
MECP2-217ENST00000628176 ATG4CQ96DT6 458 aa16.05■□□□□ 0.16
MECP2-217ENST00000628176 FOXP1Q9H334 677 aaPredicted RBP16.05■□□□□ 0.16
MECP2-217ENST00000628176 AGTPBP1Q9UPW5 1226 aa16.05■□□□□ 0.16
MECP2-217ENST00000628176 SLU7O95391 586 aaKnown RBP16.05■□□□□ 0.16
MECP2-217ENST00000628176 AKAP17AQ02040 695 aaKnown RBP16.05■□□□□ 0.16
MECP2-217ENST00000628176 FUT2Q10981 343 aa16.05■□□□□ 0.16
MECP2-217ENST00000628176 KRBA2Q6ZNG9 492 aa16.05■□□□□ 0.16
MECP2-217ENST00000628176 TMC6Q7Z403 805 aa16.05■□□□□ 0.16
MECP2-217ENST00000628176 ADGRF4Q8IZF3 695 aa16.05■□□□□ 0.16
MECP2-217ENST00000628176 KRI1Q8N9T8 703 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms