RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 SLC39A5Q6ZMH5 540 aa25.98■■□□□ 1.75
SF1-220ENST00000626028 PCSK9Q8NBP7 692 aaKnown RBP25.98■■□□□ 1.75
SF1-220ENST00000626028 LZTS2Q9BRK4 669 aa25.98■■□□□ 1.75
SF1-220ENST00000626028 SENP2Q9HC62 589 aa25.98■■□□□ 1.75
SF1-220ENST00000626028 VAT1LQ9HCJ6 419 aa25.98■■□□□ 1.75
SF1-220ENST00000626028 SH2B2O14492 632 aaPredicted RBP25.97■■□□□ 1.75
SF1-220ENST00000626028 EPB41L2O43491 1005 aaKnown RBP25.97■■□□□ 1.75
SF1-220ENST00000626028 MYCNP04198 464 aaPredicted RBP25.97■■□□□ 1.75
SF1-220ENST00000626028 EDNRBP24530 442 aa25.97■■□□□ 1.75
SF1-220ENST00000626028 CALML3P27482 149 aa25.97■■□□□ 1.75
SF1-220ENST00000626028 ADCYAP1R1P41586 468 aa25.97■■□□□ 1.75
SF1-220ENST00000626028 TNFAIP2Q03169 654 aa25.97■■□□□ 1.75
SF1-220ENST00000626028 ZNF654Q8IZM8 581 aa25.97■■□□□ 1.75
SF1-220ENST00000626028 CTCFLQ8NI51 663 aaPredicted RBP25.97■■□□□ 1.75
SF1-220ENST00000626028 NUP133Q8WUM0 1156 aa25.97■■□□□ 1.75
SF1-220ENST00000626028 COLQQ9Y215 455 aaPredicted RBP25.97■■□□□ 1.75
SF1-220ENST00000626028 TRIOBPQ9H2D6 2365 aa25.97■■□□□ 1.75
SF1-220ENST00000626028 A0A1W2PPC1 479 aa25.96■■□□□ 1.75
SF1-220ENST00000626028 CCDC69A6NI79 296 aa25.96■■□□□ 1.75
SF1-220ENST00000626028 REC8O95072 547 aa25.96■■□□□ 1.75
SF1-220ENST00000626028 HMGB1P09429 215 aaKnown RBP25.96■■□□□ 1.75
SF1-220ENST00000626028 GNAQP50148 359 aa25.96■■□□□ 1.75
SF1-220ENST00000626028 CCSAPQ6IQ19 270 aaPredicted RBP25.96■■□□□ 1.75
SF1-220ENST00000626028 PRO3102Q9H379 93 aa25.96■■□□□ 1.75
SF1-220ENST00000626028 RANBP2P49792 3224 aaKnown RBP25.96■■□□□ 1.75
SF1-220ENST00000626028 HABP4Q5JVS0 413 aaKnown RBP25.95■■□□□ 1.74
SF1-220ENST00000626028 TAPT1Q6NXT6 567 aa25.95■■□□□ 1.74
SF1-220ENST00000626028 SGMS1Q86VZ5 419 aa25.95■■□□□ 1.74
SF1-220ENST00000626028 NEK1Q96PY6 1258 aa25.95■■□□□ 1.74
SF1-220ENST00000626028 SPZ1Q9BXG8 430 aa25.95■■□□□ 1.74
SF1-220ENST00000626028 GNEQ9Y223 722 aaKnown RBP25.95■■□□□ 1.74
SF1-220ENST00000626028 PNMA6FA0A0J9YX94 578 aa25.94■■□□□ 1.74
SF1-220ENST00000626028 RBM47A0AV96 593 aaKnown RBP25.94■■□□□ 1.74
SF1-220ENST00000626028 ADCY6O43306 1168 aa25.94■■□□□ 1.74
SF1-220ENST00000626028 BMP8BP34820 402 aa25.94■■□□□ 1.74
SF1-220ENST00000626028 ACLYP53396 1101 aa25.94■■□□□ 1.74
SF1-220ENST00000626028 NFXL1Q6ZNB6 911 aa25.94■■□□□ 1.74
SF1-220ENST00000626028 NSUN6Q8TEA1 469 aaKnown RBP25.94■■□□□ 1.74
SF1-220ENST00000626028 LENG1Q96BZ8 264 aaPredicted RBP25.94■■□□□ 1.74
SF1-220ENST00000626028 PURBQ96QR8 312 aaKnown RBP25.94■■□□□ 1.74
SF1-220ENST00000626028 IWS1Q96ST2 819 aa25.94■■□□□ 1.74
SF1-220ENST00000626028 PCDHA1Q9Y5I3 950 aa25.94■■□□□ 1.74
SF1-220ENST00000626028 ELP1O95163 1332 aa25.93■■□□□ 1.74
SF1-220ENST00000626028 A0A1W2PQ45 241 aaPredicted RBP25.93■■□□□ 1.74
SF1-220ENST00000626028 A0A1W2PQY0 241 aa25.93■■□□□ 1.74
SF1-220ENST00000626028 C6orf222P0C671 652 aaPredicted RBP25.93■■□□□ 1.74
SF1-220ENST00000626028 ATN1P54259 1190 aaPredicted RBP25.93■■□□□ 1.74
SF1-220ENST00000626028 RTP1P59025 263 aa25.93■■□□□ 1.74
SF1-220ENST00000626028 PDE4DQ08499 809 aa25.93■■□□□ 1.74
SF1-220ENST00000626028 CHRDL2Q6WN34 429 aa25.93■■□□□ 1.74
SF1-220ENST00000626028 DHX32Q7L7V1 743 aaKnown RBP25.93■■□□□ 1.74
SF1-220ENST00000626028 KCNB2Q92953 911 aa25.93■■□□□ 1.74
SF1-220ENST00000626028 LTBP2Q14767 1821 aa25.93■■□□□ 1.74
SF1-220ENST00000626028 CYTH3O43739 400 aa25.92■■□□□ 1.74
SF1-220ENST00000626028 HSD17B4P51659 736 aa25.92■■□□□ 1.74
SF1-220ENST00000626028 KCNA10Q16322 511 aa25.92■■□□□ 1.74
SF1-220ENST00000626028 GNASQ5JWF2 1037 aa25.92■■□□□ 1.74
SF1-220ENST00000626028 FBXO16Q8IX29 292 aaPredicted RBP25.92■■□□□ 1.74
SF1-220ENST00000626028 SYTL5Q8TDW5 730 aaPredicted RBP25.92■■□□□ 1.74
SF1-220ENST00000626028 AP5M1Q9H0R1 490 aa25.92■■□□□ 1.74
SF1-220ENST00000626028 SLC12A7Q9Y666 1083 aa25.92■■□□□ 1.74
SF1-220ENST00000626028 NKRFO15226 690 aaKnown RBP eCLIP25.91■■□□□ 1.742e-6■■■□□ 17.1
SF1-220ENST00000626028 PPP1R11O60927 126 aaPredicted RBP25.91■■□□□ 1.74
SF1-220ENST00000626028 EXOSC10Q01780 885 aaKnown RBP25.91■■□□□ 1.74
SF1-220ENST00000626028 DUSP28Q4G0W2 176 aa25.91■■□□□ 1.74
SF1-220ENST00000626028 NOL8Q76FK4 1167 aaKnown RBP25.91■■□□□ 1.74
SF1-220ENST00000626028 TLK2Q86UE8 772 aa25.91■■□□□ 1.74
SF1-220ENST00000626028 FERMT2Q96AC1 680 aa25.91■■□□□ 1.74
SF1-220ENST00000626028 GLT1D1Q96MS3 346 aa25.91■■□□□ 1.74
SF1-220ENST00000626028 PIGSQ96S52 555 aa25.91■■□□□ 1.74
SF1-220ENST00000626028 GDF15Q99988 308 aa25.91■■□□□ 1.74
SF1-220ENST00000626028 ZEB2O60315 1214 aa25.9■■□□□ 1.74
SF1-220ENST00000626028 SMPD1P17405 629 aa25.9■■□□□ 1.74
SF1-220ENST00000626028 HSPA4P34932 840 aa25.9■■□□□ 1.74
SF1-220ENST00000626028 SLC35G1Q2M3R5 365 aa25.9■■□□□ 1.74
SF1-220ENST00000626028 EEPD1Q7L9B9 569 aa25.9■■□□□ 1.74
SF1-220ENST00000626028 SCFD2Q8WU76 684 aa25.9■■□□□ 1.74
SF1-220ENST00000626028 RMDN3Q96TC7 470 aa25.9■■□□□ 1.74
SF1-220ENST00000626028 SEZ6LQ9BYH1 1024 aa25.9■■□□□ 1.74
SF1-220ENST00000626028 STARD7Q9NQZ5 370 aa25.9■■□□□ 1.74
SF1-220ENST00000626028 PRKAG2Q9UGJ0 569 aa25.9■■□□□ 1.74
SF1-220ENST00000626028 ZMYND8Q9ULU4 1186 aaPredicted RBP25.9■■□□□ 1.74
SF1-220ENST00000626028 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.89■■□□□ 1.74
SF1-220ENST00000626028 OPLAHO14841 1288 aa25.89■■□□□ 1.74
SF1-220ENST00000626028 CTAGE5O15320 804 aa25.89■■□□□ 1.74
SF1-220ENST00000626028 CABYRO75952 493 aa25.89■■□□□ 1.74
SF1-220ENST00000626028 SYNE3Q6ZMZ3 975 aa25.89■■□□□ 1.74
SF1-220ENST00000626028 HOMER1Q86YM7 354 aa25.89■■□□□ 1.74
SF1-220ENST00000626028 RASEFQ8IZ41 740 aa25.89■■□□□ 1.74
SF1-220ENST00000626028 RRP36Q96EU6 259 aaKnown RBP25.89■■□□□ 1.74
SF1-220ENST00000626028 TOX2Q96NM4 488 aa25.89■■□□□ 1.74
SF1-220ENST00000626028 WDR11Q9BZH6 1224 aa25.89■■□□□ 1.74
SF1-220ENST00000626028 GPHNQ9NQX3 736 aaPredicted RBP25.89■■□□□ 1.74
SF1-220ENST00000626028 PDGFCQ9NRA1 345 aa25.89■■□□□ 1.74
SF1-220ENST00000626028 RBM27Q9P2N5 1060 aaKnown RBP25.89■■□□□ 1.74
SF1-220ENST00000626028 ATP11BQ9Y2G3 1177 aa25.89■■□□□ 1.74
SF1-220ENST00000626028 MROH7Q68CQ1 1323 aa25.88■■□□□ 1.73
SF1-220ENST00000626028 MYH7BA7E2Y1 1941 aa25.88■■□□□ 1.73
SF1-220ENST00000626028 CFBP00751 764 aa25.88■■□□□ 1.73
SF1-220ENST00000626028 ASGR1P07306 291 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms