RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 ZYXQ15942 572 aaKnown RBP13.27□□□□□ -0.28
CCDC163-201ENST00000625766 DPCR1Q3MIW9 517 aa13.27□□□□□ -0.28
CCDC163-201ENST00000625766 POTEDQ86YR6 584 aa13.27□□□□□ -0.28
CCDC163-201ENST00000625766 ZNF280CQ8ND82 737 aa13.27□□□□□ -0.28
CCDC163-201ENST00000625766 SMARCE1Q969G3 411 aa13.27□□□□□ -0.28
CCDC163-201ENST00000625766 GSDMAQ96QA5 445 aa13.27□□□□□ -0.28
CCDC163-201ENST00000625766 ANO3Q9BYT9 981 aa13.27□□□□□ -0.28
CCDC163-201ENST00000625766 CCDC39Q9UFE4 941 aa13.27□□□□□ -0.28
CCDC163-201ENST00000625766 C19orf81C9J6K1 198 aa13.27□□□□□ -0.29
CCDC163-201ENST00000625766 SLC37A4O43826 429 aa13.27□□□□□ -0.29
CCDC163-201ENST00000625766 TDP2O95551 362 aa13.27□□□□□ -0.29
CCDC163-201ENST00000625766 MYL1P05976 194 aa13.27□□□□□ -0.29
CCDC163-201ENST00000625766 CYP3A4P08684 503 aa13.27□□□□□ -0.29
CCDC163-201ENST00000625766 CIITAP33076 1130 aa13.27□□□□□ -0.29
CCDC163-201ENST00000625766 DPYDQ12882 1025 aa13.27□□□□□ -0.29
CCDC163-201ENST00000625766 SEMA3FQ13275 785 aa13.27□□□□□ -0.29
CCDC163-201ENST00000625766 MORC3Q14149 939 aa13.27□□□□□ -0.29
CCDC163-201ENST00000625766 USH1GQ495M9 461 aa13.27□□□□□ -0.29
CCDC163-201ENST00000625766 PRAMEF18Q5VWM3 479 aa13.27□□□□□ -0.29
CCDC163-201ENST00000625766 C12orf42Q96LP6 360 aa13.27□□□□□ -0.29
CCDC163-201ENST00000625766 WRNIP1Q96S55 665 aa13.27□□□□□ -0.29
CCDC163-201ENST00000625766 P2RX7Q99572 595 aaKnown RBP13.27□□□□□ -0.29
CCDC163-201ENST00000625766 SLF1Q9BQI6 1058 aa13.27□□□□□ -0.29
CCDC163-201ENST00000625766 CUEDC2Q9H467 287 aa13.27□□□□□ -0.29
CCDC163-201ENST00000625766 PICK1Q9NRD5 415 aa13.27□□□□□ -0.29
CCDC163-201ENST00000625766 DISC1Q9NRI5 854 aa13.27□□□□□ -0.29
CCDC163-201ENST00000625766 DDX25Q9UHL0 483 aaKnown RBP13.27□□□□□ -0.29
CCDC163-201ENST00000625766 PNMA2Q9UL42 364 aa13.27□□□□□ -0.29
CCDC163-201ENST00000625766 ABCB11O95342 1321 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 A0A087WWV3 80 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 SMTNL1A8MU46 457 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 BECN2A8MW95 431 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 GOLGA6L19H0YKK7 550 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 BIN1O00499 593 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 IKBKBO14920 756 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 USP2O75604 605 aaPredicted RBP13.26□□□□□ -0.29
CCDC163-201ENST00000625766 ICAM1P05362 532 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 BMP6P22004 513 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 CDC25AP30304 524 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 SREBF1P36956 1147 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 TECP42680 631 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 SPP2Q13103 211 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 Q4G0T1 1027 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 SARM1Q6SZW1 724 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 MLKLQ8NB16 471 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 ZC3H15Q8WU90 426 aaKnown RBP13.26□□□□□ -0.29
CCDC163-201ENST00000625766 HAS1Q92839 578 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 ZKSCAN4Q969J2 545 aaPredicted RBP13.26□□□□□ -0.29
CCDC163-201ENST00000625766 RAB34Q9BZG1 259 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 FBXO28Q9NVF7 368 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 MAN1B1Q9UKM7 699 aa13.26□□□□□ -0.29
CCDC163-201ENST00000625766 ZC3H4Q9UPT8 1303 aaKnown RBP13.26□□□□□ -0.29
CCDC163-201ENST00000625766 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.25□□□□□ -0.29
CCDC163-201ENST00000625766 SPDYE3A6NKU9 549 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 PRR29P0C7W0 189 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 TXKP42681 527 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 ARHGAP4P98171 946 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 GHRHRQ02643 423 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 NAALADL2Q58DX5 795 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 RRAGBQ5VZM2 374 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 USP50Q70EL3 339 aaPredicted RBP13.25□□□□□ -0.29
CCDC163-201ENST00000625766 LDHDQ86WU2 507 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 SAMD3Q8N6K7 520 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 DCPSQ96C86 337 aaKnown RBP13.25□□□□□ -0.29
CCDC163-201ENST00000625766 MTRQ99707 1265 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 MAGEF1Q9HAY2 307 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 KCNMB3Q9NPA1 279 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 ZNF536O15090 1300 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 GCOM1H8Y6P7 765 aaPredicted RBP13.25□□□□□ -0.29
CCDC163-201ENST00000625766 TBX3O15119 743 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 GTPBP6O43824 516 aaPredicted RBP13.25□□□□□ -0.29
CCDC163-201ENST00000625766 POLR2MP0CAP2 368 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 KARSQ15046 597 aaKnown RBP13.25□□□□□ -0.29
CCDC163-201ENST00000625766 TMEM266Q2M3C6 531 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 CABP7Q86V35 215 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 GRAMD1CQ8IYS0 662 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.25□□□□□ -0.29
CCDC163-201ENST00000625766 TRIM44Q96DX7 344 aaPredicted RBP13.25□□□□□ -0.29
CCDC163-201ENST00000625766 MMTAG2Q9BU76 263 aaKnown RBP13.25□□□□□ -0.29
CCDC163-201ENST00000625766 SLC38A10Q9HBR0 1119 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 KBTBD4Q9NVX7 518 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 MAP3K20Q9NYL2 800 aaKnown RBP13.25□□□□□ -0.29
CCDC163-201ENST00000625766 ZHX2Q9Y6X8 837 aa13.25□□□□□ -0.29
CCDC163-201ENST00000625766 SLC26A4O43511 780 aa13.24□□□□□ -0.29
CCDC163-201ENST00000625766 VCAM1P19320 739 aa13.24□□□□□ -0.29
CCDC163-201ENST00000625766 STAT6P42226 847 aa13.24□□□□□ -0.29
CCDC163-201ENST00000625766 AFMP43652 599 aa13.24□□□□□ -0.29
CCDC163-201ENST00000625766 MAP3K9P80192 1104 aa13.24□□□□□ -0.29
CCDC163-201ENST00000625766 MTMR2Q13614 643 aa13.24□□□□□ -0.29
CCDC163-201ENST00000625766 NCAPHQ15003 741 aa13.24□□□□□ -0.29
CCDC163-201ENST00000625766 CCDC174Q6PII3 467 aa13.24□□□□□ -0.29
CCDC163-201ENST00000625766 ILDR2Q71H61 639 aa13.24□□□□□ -0.29
CCDC163-201ENST00000625766 LRWD1Q9UFC0 647 aa13.24□□□□□ -0.29
CCDC163-201ENST00000625766 PPP1R9AQ9ULJ8 1098 aa13.24□□□□□ -0.29
CCDC163-201ENST00000625766 PP2D1A8MPX8 630 aa13.24□□□□□ -0.29
CCDC163-201ENST00000625766 GRIN3BO60391 1043 aa13.24□□□□□ -0.29
CCDC163-201ENST00000625766 ISM2Q6H9L7 571 aa13.24□□□□□ -0.29
CCDC163-201ENST00000625766 PLA2G4DQ86XP0 818 aa13.24□□□□□ -0.29
CCDC163-201ENST00000625766 SULF1Q8IWU6 871 aa13.24□□□□□ -0.29
CCDC163-201ENST00000625766 SLFN12Q8IYM2 578 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms