RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 ZNF589Q86UQ0 364 aaPredicted RBP17.04■□□□□ 0.32
TUBB3-215ENST00000625617 CRBNQ96SW2 442 aa17.04■□□□□ 0.32
TUBB3-215ENST00000625617 TRPV6Q9H1D0 765 aa17.04■□□□□ 0.32
TUBB3-215ENST00000625617 TCP11L1Q9NUJ3 509 aa17.04■□□□□ 0.32
TUBB3-215ENST00000625617 MSRAQ9UJ68 235 aa17.04■□□□□ 0.32
TUBB3-215ENST00000625617 PNMA2Q9UL42 364 aa17.04■□□□□ 0.32
TUBB3-215ENST00000625617 CCDC171Q6TFL3 1326 aa17.03■□□□□ 0.32
TUBB3-215ENST00000625617 FGBP02675 491 aa17.03■□□□□ 0.32
TUBB3-215ENST00000625617 HSPD1P10809 573 aaKnown RBP17.03■□□□□ 0.32
TUBB3-215ENST00000625617 PCP11498 1178 aaKnown RBP17.03■□□□□ 0.32
TUBB3-215ENST00000625617 CCL23P55773 120 aa17.03■□□□□ 0.32
TUBB3-215ENST00000625617 HAND2P61296 217 aa17.03■□□□□ 0.32
TUBB3-215ENST00000625617 HDAC1Q13547 482 aaPredicted RBP17.03■□□□□ 0.32
TUBB3-215ENST00000625617 OTOP2Q7RTS6 562 aa17.03■□□□□ 0.32
TUBB3-215ENST00000625617 TICAM2Q86XR7 235 aa17.03■□□□□ 0.32
TUBB3-215ENST00000625617 SYMPKQ92797 1274 aaKnown RBP17.03■□□□□ 0.32
TUBB3-215ENST00000625617 WDR11Q9BZH6 1224 aa17.03■□□□□ 0.32
TUBB3-215ENST00000625617 WNT8AQ9H1J5 351 aa17.03■□□□□ 0.32
TUBB3-215ENST00000625617 ALDH8A1Q9H2A2 487 aaPredicted RBP17.03■□□□□ 0.32
TUBB3-215ENST00000625617 PRDM12Q9H4Q4 367 aa17.03■□□□□ 0.32
TUBB3-215ENST00000625617 POLR3EQ9NVU0 708 aa17.03■□□□□ 0.32
TUBB3-215ENST00000625617 CXXC1Q9P0U4 656 aaPredicted RBP17.03■□□□□ 0.32
TUBB3-215ENST00000625617 WDR19Q8NEZ3 1342 aa17.02■□□□□ 0.32
TUBB3-215ENST00000625617 CALML3P27482 149 aa17.02■□□□□ 0.32
TUBB3-215ENST00000625617 CPT1AP50416 773 aa17.02■□□□□ 0.32
TUBB3-215ENST00000625617 ZNF543Q08ER8 600 aa17.02■□□□□ 0.32
TUBB3-215ENST00000625617 NMIQ13287 307 aaPredicted RBP17.02■□□□□ 0.32
TUBB3-215ENST00000625617 RNF207Q6ZRF8 634 aa17.02■□□□□ 0.32
TUBB3-215ENST00000625617 OR6J1Q8NGC5 347 aa17.02■□□□□ 0.32
TUBB3-215ENST00000625617 CLEC4DQ8WXI8 215 aa17.02■□□□□ 0.32
TUBB3-215ENST00000625617 MPHOSPH6Q99547 160 aaKnown RBP17.02■□□□□ 0.32
TUBB3-215ENST00000625617 RAD50Q92878 1312 aa17.01■□□□□ 0.31
TUBB3-215ENST00000625617 TRIM6-TRIM34B2RNG4 842 aa17.01■□□□□ 0.31
TUBB3-215ENST00000625617 PURAQ00577 322 aaKnown RBP17.01■□□□□ 0.31
TUBB3-215ENST00000625617 PDE4DQ08499 809 aa17.01■□□□□ 0.31
TUBB3-215ENST00000625617 PPP2R5BQ15173 497 aa17.01■□□□□ 0.31
TUBB3-215ENST00000625617 TJAP1Q5JTD0 557 aa17.01■□□□□ 0.31
TUBB3-215ENST00000625617 AKNAD1Q5T1N1 836 aa17.01■□□□□ 0.31
TUBB3-215ENST00000625617 MFSD6Q6ZSS7 791 aa17.01■□□□□ 0.31
TUBB3-215ENST00000625617 TBC1D10CQ8IV04 446 aa17.01■□□□□ 0.31
TUBB3-215ENST00000625617 NKX2-4Q9H2Z4 354 aa17.01■□□□□ 0.31
TUBB3-215ENST00000625617 RNF41Q9H4P4 317 aaPredicted RBP17.01■□□□□ 0.31
TUBB3-215ENST00000625617 GPHNQ9NQX3 736 aaPredicted RBP17.01■□□□□ 0.31
TUBB3-215ENST00000625617 VCANP13611 3396 aa17.01■□□□□ 0.31
TUBB3-215ENST00000625617 RBM47A0AV96 593 aaKnown RBP17■□□□□ 0.31
TUBB3-215ENST00000625617 MYL3P08590 195 aa17■□□□□ 0.31
TUBB3-215ENST00000625617 SUPT20HL2P0C7V6 817 aa17■□□□□ 0.31
TUBB3-215ENST00000625617 SNHG28P0DPA3 235 aa17■□□□□ 0.31
TUBB3-215ENST00000625617 MFAP1P55081 439 aaKnown RBP17■□□□□ 0.31
TUBB3-215ENST00000625617 RPS6P62753 249 aaKnown RBP17■□□□□ 0.31
TUBB3-215ENST00000625617 BRDTQ58F21 947 aaPredicted RBP17■□□□□ 0.31
TUBB3-215ENST00000625617 RPUSD2Q8IZ73 545 aaKnown RBP17■□□□□ 0.31
TUBB3-215ENST00000625617 TTC14Q96N46 770 aa17■□□□□ 0.31
TUBB3-215ENST00000625617 MTG1Q9BT17 334 aaPredicted RBP17■□□□□ 0.31
TUBB3-215ENST00000625617 LNPKQ9C0E8 428 aa17■□□□□ 0.31
TUBB3-215ENST00000625617 SLC28A3Q9HAS3 691 aa17■□□□□ 0.31
TUBB3-215ENST00000625617 TRMT13Q9NUP7 481 aaKnown RBP17■□□□□ 0.31
TUBB3-215ENST00000625617 TNKSO95271 1327 aa16.99■□□□□ 0.31
TUBB3-215ENST00000625617 PRUNE2Q8WUY3 3088 aa16.99■□□□□ 0.31
TUBB3-215ENST00000625617 ZBBXA8MT70 800 aa16.99■□□□□ 0.31
TUBB3-215ENST00000625617 NKRFO15226 690 aaKnown RBP eCLIP16.99■□□□□ 0.315e-7■□□□□ 10.7
TUBB3-215ENST00000625617 PFKMP08237 780 aa16.99■□□□□ 0.31
TUBB3-215ENST00000625617 EDNRBP24530 442 aa16.99■□□□□ 0.31
TUBB3-215ENST00000625617 FAM47CQ5HY64 1035 aa16.99■□□□□ 0.31
TUBB3-215ENST00000625617 GPATCH4Q5T3I0 446 aaKnown RBP16.99■□□□□ 0.31
TUBB3-215ENST00000625617 DNERQ8NFT8 737 aa16.99■□□□□ 0.31
TUBB3-215ENST00000625617 SCFD2Q8WU76 684 aa16.99■□□□□ 0.31
TUBB3-215ENST00000625617 PPM1EQ8WY54 764 aa16.99■□□□□ 0.31
TUBB3-215ENST00000625617 ESR2Q92731 530 aa16.99■□□□□ 0.31
TUBB3-215ENST00000625617 RILPL2Q969X0 211 aa16.99■□□□□ 0.31
TUBB3-215ENST00000625617 SCLYQ96I15 445 aa16.99■□□□□ 0.31
TUBB3-215ENST00000625617 YBX2Q9Y2T7 364 aaKnown RBP16.99■□□□□ 0.31
TUBB3-215ENST00000625617 SLC4A7Q9Y6M7 1214 aa16.99■□□□□ 0.31
TUBB3-215ENST00000625617 LCTP09848 1927 aa16.99■□□□□ 0.31
TUBB3-215ENST00000625617 NEDD4P46934 1319 aa16.98■□□□□ 0.31
TUBB3-215ENST00000625617 CYP2C9P11712 490 aa16.98■□□□□ 0.31
TUBB3-215ENST00000625617 USH1GQ495M9 461 aa16.98■□□□□ 0.31
TUBB3-215ENST00000625617 PRDM6Q9NQX0 595 aa16.98■□□□□ 0.31
TUBB3-215ENST00000625617 THEGQ9P2T0 379 aa16.98■□□□□ 0.31
TUBB3-215ENST00000625617 B4DLN1 442 aa16.97■□□□□ 0.31
TUBB3-215ENST00000625617 ATP2A2P16615 1042 aaKnown RBP16.97■□□□□ 0.31
TUBB3-215ENST00000625617 IGFBP4P22692 258 aa16.97■□□□□ 0.31
TUBB3-215ENST00000625617 MRPL12P52815 198 aaKnown RBP16.97■□□□□ 0.31
TUBB3-215ENST00000625617 ADGRE1Q14246 886 aa16.97■□□□□ 0.31
TUBB3-215ENST00000625617 PPP2R2DQ66LE6 453 aa16.97■□□□□ 0.31
TUBB3-215ENST00000625617 KPNA6O60684 536 aa16.96■□□□□ 0.31
TUBB3-215ENST00000625617 GOLGA8HP0CJ92 632 aa16.96■□□□□ 0.31
TUBB3-215ENST00000625617 NT5C2P49902 561 aa16.96■□□□□ 0.31
TUBB3-215ENST00000625617 RABGGTBP53611 331 aa16.96■□□□□ 0.31
TUBB3-215ENST00000625617 TTLL4Q14679 1199 aa16.96■□□□□ 0.31
TUBB3-215ENST00000625617 NBPF20Q3BBV1 942 aa16.96■□□□□ 0.31
TUBB3-215ENST00000625617 IQCA1Q86XH1 822 aa16.96■□□□□ 0.31
TUBB3-215ENST00000625617 ATXN2LQ8WWM7 1075 aaKnown RBP16.96■□□□□ 0.31
TUBB3-215ENST00000625617 ZKSCAN3Q9BRR0 538 aa16.96■□□□□ 0.31
TUBB3-215ENST00000625617 PCDHA11Q9Y5I1 949 aa16.96■□□□□ 0.31
TUBB3-215ENST00000625617 TTC28Q96AY4 2481 aa16.96■□□□□ 0.31
TUBB3-215ENST00000625617 A6NJR5 290 aa16.95■□□□□ 0.3
TUBB3-215ENST00000625617 ZNF213O14771 459 aa16.95■□□□□ 0.3
TUBB3-215ENST00000625617 TXNP10599 105 aaKnown RBP16.95■□□□□ 0.3
TUBB3-215ENST00000625617 SDSP20132 328 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms