RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 ICAM1P05362 532 aa13.08□□□□□ -0.32
DDX41-218ENST00000625286 SLC3A2P08195 630 aaKnown RBP13.08□□□□□ -0.32
DDX41-218ENST00000625286 CYP2C9P11712 490 aa13.08□□□□□ -0.32
DDX41-218ENST00000625286 MX1P20591 662 aa13.08□□□□□ -0.32
DDX41-218ENST00000625286 DUSP28Q4G0W2 176 aa13.08□□□□□ -0.32
DDX41-218ENST00000625286 BTNL9Q6UXG8 535 aa13.08□□□□□ -0.32
DDX41-218ENST00000625286 KIAA1211Q6ZU35 1233 aa13.08□□□□□ -0.32
DDX41-218ENST00000625286 SYMPKQ92797 1274 aaKnown RBP13.08□□□□□ -0.32
DDX41-218ENST00000625286 TMEM47Q9BQJ4 181 aa13.08□□□□□ -0.32
DDX41-218ENST00000625286 ALDH8A1Q9H2A2 487 aaPredicted RBP13.08□□□□□ -0.32
DDX41-218ENST00000625286 TCF20Q9UGU0 1960 aaKnown RBP13.07□□□□□ -0.32
DDX41-218ENST00000625286 TNFRSF10AO00220 468 aa13.07□□□□□ -0.32
DDX41-218ENST00000625286 FGAP02671 866 aa13.07□□□□□ -0.32
DDX41-218ENST00000625286 PURAQ00577 322 aaKnown RBP13.07□□□□□ -0.32
DDX41-218ENST00000625286 TTLL4Q14679 1199 aa13.07□□□□□ -0.32
DDX41-218ENST00000625286 SLC30A10Q6XR72 485 aa13.07□□□□□ -0.32
DDX41-218ENST00000625286 FAM227BQ96M60 508 aa13.07□□□□□ -0.32
DDX41-218ENST00000625286 ASB2Q96Q27 587 aa13.07□□□□□ -0.32
DDX41-218ENST00000625286 GAS2L1Q99501 681 aaPredicted RBP13.07□□□□□ -0.32
DDX41-218ENST00000625286 VTA1Q9NP79 307 aa13.07□□□□□ -0.32
DDX41-218ENST00000625286 RAPGEFL1Q9UHV5 662 aa13.07□□□□□ -0.32
DDX41-218ENST00000625286 MSRAQ9UJ68 235 aa13.07□□□□□ -0.32
DDX41-218ENST00000625286 FRMPD2Q68DX3 1309 aaPredicted RBP13.07□□□□□ -0.32
DDX41-218ENST00000625286 SCN10AQ9Y5Y9 1956 aa13.07□□□□□ -0.32
DDX41-218ENST00000625286 RFXAPO00287 272 aa13.06□□□□□ -0.32
DDX41-218ENST00000625286 ARHGEF15O94989 841 aa13.06□□□□□ -0.32
DDX41-218ENST00000625286 IGFBP4P22692 258 aa13.06□□□□□ -0.32
DDX41-218ENST00000625286 ALDH5A1P51649 535 aaPredicted RBP13.06□□□□□ -0.32
DDX41-218ENST00000625286 ALX1Q15699 326 aa13.06□□□□□ -0.32
DDX41-218ENST00000625286 RAB30Q15771 203 aa13.06□□□□□ -0.32
DDX41-218ENST00000625286 LRRFIP1Q32MZ4 808 aaKnown RBP13.06□□□□□ -0.32
DDX41-218ENST00000625286 DCAF4Q8WV16 495 aa13.06□□□□□ -0.32
DDX41-218ENST00000625286 ATXN2LQ8WWM7 1075 aaKnown RBP13.06□□□□□ -0.32
DDX41-218ENST00000625286 COPS5Q92905 334 aa13.06□□□□□ -0.32
DDX41-218ENST00000625286 WDR11Q9BZH6 1224 aa13.06□□□□□ -0.32
DDX41-218ENST00000625286 GPCPD1Q9NPB8 672 aa13.06□□□□□ -0.32
DDX41-218ENST00000625286 TRIP12Q14669 1992 aaPredicted RBP13.05□□□□□ -0.32
DDX41-218ENST00000625286 A0A0D9SFI3 127 aa13.05□□□□□ -0.32
DDX41-218ENST00000625286 EPOPA6NHQ4 379 aa13.05□□□□□ -0.32
DDX41-218ENST00000625286 ZEB2O60315 1214 aa13.05□□□□□ -0.32
DDX41-218ENST00000625286 CCDC96Q2M329 555 aa13.05□□□□□ -0.32
DDX41-218ENST00000625286 SYDE2Q5VT97 1194 aa13.05□□□□□ -0.32
DDX41-218ENST00000625286 ZNF589Q86UQ0 364 aaPredicted RBP13.05□□□□□ -0.32
DDX41-218ENST00000625286 SLC28A3Q9HAS3 691 aa13.05□□□□□ -0.32
DDX41-218ENST00000625286 TCP11L1Q9NUJ3 509 aa13.05□□□□□ -0.32
DDX41-218ENST00000625286 MYL3P08590 195 aa13.04□□□□□ -0.32
DDX41-218ENST00000625286 PDHBP11177 359 aa13.04□□□□□ -0.32
DDX41-218ENST00000625286 TOP1P11387 765 aaKnown RBP13.04□□□□□ -0.32
DDX41-218ENST00000625286 EDNRBP24530 442 aa13.04□□□□□ -0.32
DDX41-218ENST00000625286 GPNMBQ14956 572 aa13.04□□□□□ -0.32
DDX41-218ENST00000625286 NBPF20Q3BBV1 942 aa13.04□□□□□ -0.32
DDX41-218ENST00000625286 SPRED2Q7Z698 418 aa13.04□□□□□ -0.32
DDX41-218ENST00000625286 DEFB128Q7Z7B8 93 aa13.04□□□□□ -0.32
DDX41-218ENST00000625286 ADAMTS19Q8TE59 1207 aa13.04□□□□□ -0.32
DDX41-218ENST00000625286 TBC1D5Q92609 795 aa13.04□□□□□ -0.32
DDX41-218ENST00000625286 NECAB3Q96P71 396 aaPredicted RBP13.04□□□□□ -0.32
DDX41-218ENST00000625286 CTAGE1Q96RT6 745 aa13.04□□□□□ -0.32
DDX41-218ENST00000625286 SEZ6LQ9BYH1 1024 aa13.04□□□□□ -0.32
DDX41-218ENST00000625286 CPVLQ9H3G5 476 aa13.04□□□□□ -0.32
DDX41-218ENST00000625286 THEGQ9P2T0 379 aa13.04□□□□□ -0.32
DDX41-218ENST00000625286 PCDHA11Q9Y5I1 949 aa13.04□□□□□ -0.32
DDX41-218ENST00000625286 SLC4A7Q9Y6M7 1214 aa13.04□□□□□ -0.32
DDX41-218ENST00000625286 TNKSO95271 1327 aa13.04□□□□□ -0.32
DDX41-218ENST00000625286 PTPDC1A2A3K4 754 aa13.03□□□□□ -0.32
DDX41-218ENST00000625286 ARIH2O95376 493 aa13.03□□□□□ -0.32
DDX41-218ENST00000625286 SNHG28P0DPA3 235 aa13.03□□□□□ -0.32
DDX41-218ENST00000625286 HSPD1P10809 573 aaKnown RBP13.03□□□□□ -0.32
DDX41-218ENST00000625286 BMP1P13497 986 aa13.03□□□□□ -0.32
DDX41-218ENST00000625286 ATP2A2P16615 1042 aaKnown RBP13.03□□□□□ -0.32
DDX41-218ENST00000625286 CALML3P27482 149 aa13.03□□□□□ -0.32
DDX41-218ENST00000625286 PDE1AP54750 535 aa13.03□□□□□ -0.32
DDX41-218ENST00000625286 HAND2P61296 217 aa13.03□□□□□ -0.32
DDX41-218ENST00000625286 RPS6P62753 249 aaKnown RBP13.03□□□□□ -0.32
DDX41-218ENST00000625286 MRPS5P82675 430 aaKnown RBP13.03□□□□□ -0.32
DDX41-218ENST00000625286 TFF2Q03403 129 aa13.03□□□□□ -0.32
DDX41-218ENST00000625286 RRP12Q5JTH9 1297 aaKnown RBP13.03□□□□□ -0.32
DDX41-218ENST00000625286 PPP4R3BQ5MIZ7 849 aa13.03□□□□□ -0.32
DDX41-218ENST00000625286 ANKRD45Q5TZF3 282 aa13.03□□□□□ -0.32
DDX41-218ENST00000625286 KRT40Q6A162 431 aa13.03□□□□□ -0.32
DDX41-218ENST00000625286 RPUSD2Q8IZ73 545 aaKnown RBP13.03□□□□□ -0.32
DDX41-218ENST00000625286 EVI5LQ96CN4 794 aa13.03□□□□□ -0.32
DDX41-218ENST00000625286 HELLSQ9NRZ9 838 aa13.03□□□□□ -0.32
DDX41-218ENST00000625286 PTPRSQ13332 1948 aa13.03□□□□□ -0.32
DDX41-218ENST00000625286 A6NJR5 290 aa13.02□□□□□ -0.33
DDX41-218ENST00000625286 ZBBXA8MT70 800 aa13.02□□□□□ -0.33
DDX41-218ENST00000625286 CA3P07451 260 aa13.02□□□□□ -0.33
DDX41-218ENST00000625286 GOLGA8HP0CJ92 632 aa13.02□□□□□ -0.33
DDX41-218ENST00000625286 COL9A1P20849 921 aa13.02□□□□□ -0.33
DDX41-218ENST00000625286 ZNF543Q08ER8 600 aa13.02□□□□□ -0.33
DDX41-218ENST00000625286 MCMDC2Q4G0Z9 681 aa13.02□□□□□ -0.33
DDX41-218ENST00000625286 PPP2R2DQ66LE6 453 aa13.02□□□□□ -0.33
DDX41-218ENST00000625286 RNF207Q6ZRF8 634 aa13.02□□□□□ -0.33
DDX41-218ENST00000625286 TBC1D10CQ8IV04 446 aa13.02□□□□□ -0.33
DDX41-218ENST00000625286 OR6J1Q8NGC5 347 aa13.02□□□□□ -0.33
DDX41-218ENST00000625286 MTG1Q9BT17 334 aaPredicted RBP13.02□□□□□ -0.33
DDX41-218ENST00000625286 CERS4Q9HA82 394 aa13.02□□□□□ -0.33
DDX41-218ENST00000625286 POLR3EQ9NVU0 708 aa13.02□□□□□ -0.33
DDX41-218ENST00000625286 ADD3Q9UEY8 706 aaKnown RBP13.02□□□□□ -0.33
DDX41-218ENST00000625286 BRWD1Q9NSI6 2320 aa13.01□□□□□ -0.33
DDX41-218ENST00000625286 IQCF3P0C7M6 154 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms