RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, human

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDKL5-208	ENST00000624953	FAM135A	Q9P2D6	1515 aa		4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	BIN1	O00499	593 aa		4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	EPHX1	P07099	455 aa		4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	KIR2DL1	P43626	348 aa	Predicted RBP	4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	KIR2DL2	P43627	348 aa	Predicted RBP	4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	AFM	P43652	599 aa		4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	CYP4F3	Q08477	520 aa		4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	GRB10	Q13322	594 aa		4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	TIGD5	Q53EQ6	642 aa		4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	CRTC3	Q6UUV7	619 aa		4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	FAM9A	Q8IZU1	332 aa	Predicted RBP	4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	ANKS4B	Q8N8V4	417 aa		4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	MICAL1	Q8TDZ2	1067 aa		4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	ARMC5	Q96C12	935 aa		4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	MAP6	Q96JE9	813 aa		4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	FCRL2	Q96LA5	508 aa	Predicted RBP	4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	MCMBP	Q9BTE3	642 aa		4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	KRTAP4-2	Q9BYR5	136 aa		4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	ERVK13-1	Q9NX77	482 aa		4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	DIS3	Q9Y2L1	958 aa	Known RBP	4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	MSRB2	Q9Y3D2	182 aa		4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	COL16A1	Q07092	1604 aa	Predicted RBP	4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	NPHP4	O75161	1426 aa	Predicted RBP	4.89	□□□□□ -1.63
CDKL5-208	ENST00000624953	FYCO1	Q9BQS8	1478 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	EIF2AK4	Q9P2K8	1649 aa	Known RBP	4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	FAM86C2P	A6NEL3	165 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	FADS2P1	A8MWK0	482 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953		H0Y8X5	98 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	ENDOU	P21128	410 aa	Known RBP	4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	LTK	P29376	864 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	HNRNPM	P52272	730 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	PCBP3	P57721	371 aa	Known RBP	4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	ERVFC1	P60507	584 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	NCAPH	Q15003	741 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	TESK1	Q15569	626 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	GNPTAB	Q3T906	1256 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	VHLL	Q6RSH7	139 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	NLRX1	Q86UT6	975 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	ZSWIM9	Q86XI8	627 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	LILRA2	Q8N149	483 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	ANAPC16	Q96DE5	110 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	HHIPL1	Q96JK4	782 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	MRGPRX3	Q96LB0	322 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	ASCC2	Q9H1I8	757 aa	Predicted RBP	4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	ACTR10	Q9NZ32	417 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	PCDHB10	Q9UN67	800 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	EP400	Q96L91	3159 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	KIAA1107	Q9UPP5	1409 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	NCOA2	Q15596	1464 aa		4.88	□□□□□ -1.63
CDKL5-208	ENST00000624953	CROCC2	H7BZ55	1655 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	KDM5A	P29375	1690 aa	Known RBP	4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	SHPRH	Q149N8	1683 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	FITM1	A5D6W6	292 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	ANKRD34B	A5PLL1	514 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	FGF10	O15520	208 aa	Predicted RBP	4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	NRDC	O43847	1150 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	GLI1	P08151	1106 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	SYP	P08247	313 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	ITGA4	P13612	1032 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	CHRNE	Q04844	493 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	RBL2	Q08999	1139 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	MESP2	Q0VG99	397 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	SNX17	Q15036	470 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	CLEC16A	Q2KHT3	1053 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	ZPBP2	Q6X784	338 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	SLCO6A1	Q86UG4	719 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	FIBCD1	Q8N539	461 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	CELF2-AS1	Q8N7Q2	184 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	CPLX3	Q8WVH0	158 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	FAM168A	Q92567	244 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	DHX38	Q92620	1227 aa	Known RBP	4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	TNFRSF10D	Q9UBN6	386 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	APEX2	Q9UBZ4	518 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	CGGBP1	Q9UFW8	167 aa	Predicted RBP	4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	EMC9	Q9Y3B6	208 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	MRVI1	Q9Y6F6	885 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	SPAG9	O60271	1321 aa	Known RBP	4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	TNR	Q92752	1358 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	ABCC3	O15438	1527 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	NWD1	Q149M9	1564 aa		4.87	□□□□□ -1.63
CDKL5-208	ENST00000624953	LRP6	O75581	1613 aa		4.86	□□□□□ -1.63
CDKL5-208	ENST00000624953	TET3	O43151	1660 aa		4.86	□□□□□ -1.63
CDKL5-208	ENST00000624953	TOM1	O60784	492 aa		4.86	□□□□□ -1.63
CDKL5-208	ENST00000624953	SSB	P05455	408 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
CDKL5-208	ENST00000624953	DNAJA1	P31689	397 aa	Known RBP	4.86	□□□□□ -1.63
CDKL5-208	ENST00000624953	DUSP4	Q13115	394 aa		4.86	□□□□□ -1.63
CDKL5-208	ENST00000624953	SERINC3	Q13530	473 aa		4.86	□□□□□ -1.63
CDKL5-208	ENST00000624953	RCSD1	Q6JBY9	416 aa		4.86	□□□□□ -1.63
CDKL5-208	ENST00000624953	KIAA1211L	Q6NV74	962 aa		4.86	□□□□□ -1.63
CDKL5-208	ENST00000624953	GGT6	Q6P531	493 aa		4.86	□□□□□ -1.63
CDKL5-208	ENST00000624953	C6orf15	Q6UXA7	325 aa	Predicted RBP	4.86	□□□□□ -1.63
CDKL5-208	ENST00000624953	CILP2	Q8IUL8	1156 aa		4.86	□□□□□ -1.63
CDKL5-208	ENST00000624953	FAM178B	Q8IXR5	827 aa		4.86	□□□□□ -1.63
CDKL5-208	ENST00000624953	KIRREL1	Q96J84	757 aa		4.86	□□□□□ -1.63
CDKL5-208	ENST00000624953	FCRL3	Q96P31	734 aa	Predicted RBP	4.86	□□□□□ -1.63
CDKL5-208	ENST00000624953	ZNF644	Q9H582	1327 aa	Predicted RBP	4.86	□□□□□ -1.63
CDKL5-208	ENST00000624953	NLRP1	Q9C000	1473 aa		4.86	□□□□□ -1.63
CDKL5-208	ENST00000624953	ARHGAP23	Q9P227	1491 aa		4.86	□□□□□ -1.63
CDKL5-208	ENST00000624953	SLIT1	O75093	1534 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms