RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 PENKP01210 267 aaPredicted RBP10.16□□□□□ -0.78
USB1-216ENST00000624720 CYP19A1P11511 503 aaPredicted RBP10.16□□□□□ -0.78
USB1-216ENST00000624720 CRKLP46109 303 aaKnown RBP10.16□□□□□ -0.78
USB1-216ENST00000624720 CDK17Q00537 523 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 APOBRQ0VD83 1088 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 POLA2Q14181 598 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 WHAMMP3Q1A5X7 153 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 MUM1Q2TAK8 710 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 CCDC144BQ3MJ40 725 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 CCDC38Q502W7 563 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 C10orf76Q5T2E6 689 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 VPS52Q8N1B4 723 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 ASIC4Q96FT7 647 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 HAUS7Q99871 368 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 RABEP2Q9H5N1 569 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 DDX25Q9UHL0 483 aaKnown RBP10.16□□□□□ -0.78
USB1-216ENST00000624720 PFDN1O60925 122 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 MLH1P40692 756 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 GUCY2FP51841 1108 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 IMMTQ16891 758 aaKnown RBP10.16□□□□□ -0.78
USB1-216ENST00000624720 PPP2R3CQ969Q6 453 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 OPTNQ96CV9 577 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 GPR101Q96P66 508 aaPredicted RBP10.16□□□□□ -0.78
USB1-216ENST00000624720 DNAI2Q9GZS0 605 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 WDR70Q9NW82 654 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 AFF2P51816 1311 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 TTI1O43156 1089 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 RASSF9O75901 435 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 NFKBIAP25963 317 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 ZBTB17Q13105 803 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 CCDC40Q4G0X9 1142 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 TMEM151BQ8IW70 566 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 TNIP2Q8NFZ5 429 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.16□□□□□ -0.78
USB1-216ENST00000624720 ZNF512BQ96KM6 892 aaPredicted RBP10.16□□□□□ -0.78
USB1-216ENST00000624720 DBNDD2Q9BQY9 259 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 PCMTD2Q9NV79 361 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.16□□□□□ -0.78
USB1-216ENST00000624720 PCSK1NQ9UHG2 260 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 TMCO1Q9UM00 188 aa10.16□□□□□ -0.78
USB1-216ENST00000624720 LMO7Q8WWI1 1683 aa10.15□□□□□ -0.78
USB1-216ENST00000624720 NWD2Q9ULI1 1742 aa10.15□□□□□ -0.78
USB1-216ENST00000624720 CRYBG1Q9Y4K1 1723 aa10.15□□□□□ -0.78
USB1-216ENST00000624720 CPA1P15085 419 aa10.15□□□□□ -0.78
USB1-216ENST00000624720 SLC16A2P36021 539 aa10.15□□□□□ -0.78
USB1-216ENST00000624720 ADALQ6DHV7 355 aa10.15□□□□□ -0.78
USB1-216ENST00000624720 KRT77Q7Z794 578 aa10.15□□□□□ -0.78
USB1-216ENST00000624720 DEPTORQ8TB45 409 aa10.15□□□□□ -0.78
USB1-216ENST00000624720 MAIP1Q8WWC4 291 aa10.15□□□□□ -0.78
USB1-216ENST00000624720 ABHD8Q96I13 439 aa10.15□□□□□ -0.78
USB1-216ENST00000624720 CCT7Q99832 543 aa10.15□□□□□ -0.78
USB1-216ENST00000624720 PDE11AQ9HCR9 933 aa10.15□□□□□ -0.78
USB1-216ENST00000624720 ANO10Q9NW15 660 aa10.15□□□□□ -0.78
USB1-216ENST00000624720 CYP2E1P05181 493 aaPredicted RBP10.15□□□□□ -0.79
USB1-216ENST00000624720 VIMP08670 466 aaKnown RBP10.15□□□□□ -0.79
USB1-216ENST00000624720 SYT1P21579 422 aa10.15□□□□□ -0.79
USB1-216ENST00000624720 S100A5P33763 92 aa10.15□□□□□ -0.79
USB1-216ENST00000624720 BPIFB4P59827 614 aa10.15□□□□□ -0.79
USB1-216ENST00000624720 PTPN12Q05209 780 aaKnown RBP10.15□□□□□ -0.79
USB1-216ENST00000624720 BEND6Q5SZJ8 279 aaPredicted RBP10.15□□□□□ -0.79
USB1-216ENST00000624720 CCDC122Q5T0U0 273 aa10.15□□□□□ -0.79
USB1-216ENST00000624720 CCDC174Q6PII3 467 aa10.15□□□□□ -0.79
USB1-216ENST00000624720 ILDR2Q71H61 639 aa10.15□□□□□ -0.79
USB1-216ENST00000624720 LRRN4CLQ8ND94 238 aa10.15□□□□□ -0.79
USB1-216ENST00000624720 MAELQ96JY0 434 aaKnown RBP10.15□□□□□ -0.79
USB1-216ENST00000624720 RHBDL2Q9NX52 303 aa10.15□□□□□ -0.79
USB1-216ENST00000624720 HESX1Q9UBX0 185 aa10.15□□□□□ -0.79
USB1-216ENST00000624720 RGS17Q9UGC6 210 aaPredicted RBP10.15□□□□□ -0.79
USB1-216ENST00000624720 SRP68Q9UHB9 627 aaKnown RBP10.15□□□□□ -0.79
USB1-216ENST00000624720 ACAD8Q9UKU7 415 aa10.15□□□□□ -0.79
USB1-216ENST00000624720 PRR12Q9ULL5 1215 aa10.15□□□□□ -0.79
USB1-216ENST00000624720 LUC7L2Q9Y383 392 aaKnown RBP10.15□□□□□ -0.79
USB1-216ENST00000624720 HTR3EA5X5Y0 456 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 H0Y3Z8 333 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 TBC1D12O60347 775 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 SUPT3HO75486 399 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 PDHBP11177 359 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 ATP4AP20648 1035 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 BOLA3Q53S33 107 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 CFAP157Q5JU67 520 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 ZSCAN25Q6NSZ9 544 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 LINC00469Q8N7U9 141 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 KRI1Q8N9T8 703 aaKnown RBP10.14□□□□□ -0.79
USB1-216ENST00000624720 SMC1BQ8NDV3 1235 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 CACTINQ8WUQ7 758 aaKnown RBP10.14□□□□□ -0.79
USB1-216ENST00000624720 TBC1D31Q96DN5 1066 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 RNPC3Q96LT9 517 aaKnown RBP10.14□□□□□ -0.79
USB1-216ENST00000624720 SRPK1Q96SB4 655 aaKnown RBP10.14□□□□□ -0.79
USB1-216ENST00000624720 SFMBT1Q9UHJ3 866 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 PALD1Q9ULE6 856 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 ATXN2Q99700 1313 aaKnown RBP10.14□□□□□ -0.79
USB1-216ENST00000624720 TEX28O15482 410 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 ARHGAP25P42331 645 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 CTCFP49711 727 aaPredicted RBP10.14□□□□□ -0.79
USB1-216ENST00000624720 GPR162Q16538 588 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 PCGF5Q86SE9 256 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 PALB2Q86YC2 1186 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 CKAP2LQ8IYA6 745 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 WDR66Q8TBY9 1149 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 NSMCE1Q8WV22 266 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms