RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 TEKT1Q969V4 418 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 MXD3Q9BW11 206 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 TMX4Q9H1E5 349 aaPredicted RBP9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 JMJD4Q9H9V9 463 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 RIC8AQ9NPQ8 531 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 LRWD1Q9UFC0 647 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 G3V3G9 751 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 SCNN1DP51172 638 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 PPP2R3AQ06190 1150 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 COBLL1Q53SF7 1204 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 GPATCH4Q5T3I0 446 aaKnown RBP9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 DCAF8Q5TAQ9 597 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 CNNM4Q6P4Q7 775 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 SV2BQ7L1I2 683 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 ADGRF4Q8IZF3 695 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 CSGALNACT2Q8N6G5 542 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 DUSP9Q99956 384 aaKnown RBP9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 RAB34Q9BZG1 259 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 IRX2Q9BZI1 471 aaPredicted RBP9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 ARGLU1Q9NWB6 273 aaPredicted RBP9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 STK17AQ9UEE5 414 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 NRXN2Q9P2S2 1712 aa9.32□□□□□ -0.92
SND1-IT1-201ENST00000623342 SLC37A4O43826 429 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 TDP2O95551 362 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 PDE6BP35913 854 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 DNM2P50570 870 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 STK4Q13043 487 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 PDIA5Q14554 519 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 APOBEC3HQ6NTF7 200 aaKnown RBP9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 COL23A1Q86Y22 540 aaPredicted RBP9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 FAM114A1Q8IWE2 563 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 A0A0U1RQJ8 604 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 TTC26A0AVF1 554 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 PES1O00541 588 aaKnown RBP9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 MPHOSPH10O00566 681 aaKnown RBP9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 EDIL3O43854 480 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 APBA3O96018 575 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 CLCN6P51797 869 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 GRB10Q13322 594 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 ANKRD40Q6AI12 368 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 ACRBPQ8NEB7 543 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 OR8K1Q8NGG5 319 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 ATRIPQ8WXE1 791 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 CDK5RAP3Q96JB5 506 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 TUBGCP2Q9BSJ2 902 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 EHD4Q9H223 541 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 ZNF446Q9NWS9 450 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 FAM53CQ9NYF3 392 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 CAPN11Q9UMQ6 739 aa9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 LUC7L2Q9Y383 392 aaKnown RBP9.31□□□□□ -0.92
SND1-IT1-201ENST00000623342 ZBTB5O15062 677 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 PPP1R11O60927 126 aaPredicted RBP9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 FCER1AP12319 257 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 PRKCSHP14314 528 aaPredicted RBP9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 TNNI2P48788 182 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 CLK2P49760 499 aaKnown RBP9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 MRPL12P52815 198 aaKnown RBP9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 ATP2B2Q01814 1243 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 CCDC96Q2M329 555 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 ZNF569Q5MCW4 686 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 PPP4R3AQ6IN85 833 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 TTBK2Q6IQ55 1244 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 POTEAQ6S8J7 498 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 KRT222Q8N1A0 295 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 LARP4BQ92615 738 aaKnown RBP9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 CUL5Q93034 780 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 MASTLQ96GX5 879 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 CCDC17Q96LX7 622 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 PNMA5Q96PV4 448 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 DNAJC7Q99615 494 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 PRDM10Q9NQV6 1147 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 BLOC1S4Q9NUP1 217 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 ADAMTSL1Q8N6G6 1762 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 PVALEFA0A1B0GWK0 134 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 B4DLN1 442 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 ZSCAN20P17040 1043 aaPredicted RBP9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 CRKP46108 304 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 NFIAQ12857 509 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 TUBB2AQ13885 445 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 BMS1Q14692 1282 aaKnown RBP9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 UBE2SQ16763 222 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 TSR1Q2NL82 804 aaKnown RBP9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 KRT79Q5XKE5 535 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 UNC13DQ70J99 1090 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 RSRC2Q7L4I2 434 aaKnown RBP9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 PODNQ7Z5L7 613 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 GPR161Q8N6U8 529 aaKnown RBP9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 MTMR8Q96EF0 704 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 CNOT6LQ96LI5 555 aaKnown RBP9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 TUBB2BQ9BVA1 445 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 NUP58Q9BVL2 599 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 MYO1AQ9UBC5 1043 aa9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 EPN1Q9Y6I3 576 aaPredicted RBP9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 GREB1LQ9C091 1923 aaPredicted RBP9.3□□□□□ -0.92
SND1-IT1-201ENST00000623342 CTAGE9A4FU28 777 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 MYMKA6NI61 221 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 USP17L10C9JJH3 530 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 HOXA7P31268 230 aaPredicted RBP9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 SLC16A2P36021 539 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 MCM6Q14566 821 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms