RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 CEP152O94986 1710 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 ERVV-1B6SEH8 477 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 CLIC2O15247 247 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 DMTNQ08495 405 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 PPM1KQ8N3J5 372 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.74■□□□□ 0.43
GABRB3-215ENST00000622697 PPM1EQ8WY54 764 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 ARAP3Q8WWN8 1544 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 H2AFZP0C0S5 128 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 FOXO4P98177 505 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 H2AFVQ71UI9 128 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 APBB1IPQ7Z5R6 666 aaPredicted RBP17.74■□□□□ 0.43
GABRB3-215ENST00000622697 ABCC12Q96J65 1359 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 DLATP10515 647 aaKnown RBP17.74■□□□□ 0.43
GABRB3-215ENST00000622697 GYS2P54840 703 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 FAM196AQ6ZSG2 479 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 DHX40Q8IX18 779 aaKnown RBP17.74■□□□□ 0.43
GABRB3-215ENST00000622697 NHEJ1Q9H9Q4 299 aaPredicted RBP17.74■□□□□ 0.43
GABRB3-215ENST00000622697 TRIM49BA6NDI0 452 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 GDF11O95390 407 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 FTCDO95954 541 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 POLR2MP0CAP2 368 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 FERP16591 822 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 MTMR3Q13615 1198 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 PLCD3Q8N3E9 789 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 VTI1AQ96AJ9 217 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 LY9Q9HBG7 655 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 NRKQ7Z2Y5 1582 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 TBC1D8O95759 1140 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 APBA3O96018 575 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 CAPN12Q6ZSI9 719 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 SREK1Q8WXA9 508 aaKnown RBP17.74■□□□□ 0.43
GABRB3-215ENST00000622697 RAB17Q9H0T7 212 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 FAM169AQ9Y6X4 670 aa17.74■□□□□ 0.43
GABRB3-215ENST00000622697 NOP56O00567 594 aaKnown RBP17.73■□□□□ 0.43
GABRB3-215ENST00000622697 SEMA3EO15041 775 aa17.73■□□□□ 0.43
GABRB3-215ENST00000622697 CHURC1Q8WUH1 139 aa17.73■□□□□ 0.43
GABRB3-215ENST00000622697 COL4A3BPQ9Y5P4 624 aa17.73■□□□□ 0.43
GABRB3-215ENST00000622697 NDUFA10O95299 355 aa17.73■□□□□ 0.43
GABRB3-215ENST00000622697 PTPREP23469 700 aa17.73■□□□□ 0.43
GABRB3-215ENST00000622697 LACTBP83111 547 aaPredicted RBP17.73■□□□□ 0.43
GABRB3-215ENST00000622697 TCP11X2Q5H9J9 407 aa17.73■□□□□ 0.43
GABRB3-215ENST00000622697 POTEDQ86YR6 584 aa17.73■□□□□ 0.43
GABRB3-215ENST00000622697 FAM71BQ8TC56 605 aa17.73■□□□□ 0.43
GABRB3-215ENST00000622697 TRIM7Q9C029 511 aa17.73■□□□□ 0.43
GABRB3-215ENST00000622697 EPC1Q9H2F5 836 aa17.73■□□□□ 0.43
GABRB3-215ENST00000622697 RABGAP1Q9Y3P9 1069 aa17.73■□□□□ 0.43
GABRB3-215ENST00000622697 NBPF26B4DH59 902 aa17.73■□□□□ 0.43
GABRB3-215ENST00000622697 RGS16O15492 202 aaPredicted RBP17.73■□□□□ 0.43
GABRB3-215ENST00000622697 KRT15P19012 456 aa17.73■□□□□ 0.43
GABRB3-215ENST00000622697 PRDX5P30044 214 aa17.73■□□□□ 0.43
GABRB3-215ENST00000622697 XKR9Q5GH70 373 aa17.73■□□□□ 0.43
GABRB3-215ENST00000622697 NBPF10Q6P3W6 841 aaKnown RBP17.73■□□□□ 0.43
GABRB3-215ENST00000622697 NBPF15Q8N660 670 aa17.73■□□□□ 0.43
GABRB3-215ENST00000622697 FAM133AQ8N9E0 248 aa17.73■□□□□ 0.43
GABRB3-215ENST00000622697 CDC42BPGQ6DT37 1551 aa17.73■□□□□ 0.43
GABRB3-215ENST00000622697 LAD1O00515 517 aa17.73■□□□□ 0.43
GABRB3-215ENST00000622697 EIF4A3P38919 411 aaKnown RBP17.72■□□□□ 0.43
GABRB3-215ENST00000622697 SNAP25P60880 206 aa17.72■□□□□ 0.43
GABRB3-215ENST00000622697 NAA25Q14CX7 972 aa17.72■□□□□ 0.43
GABRB3-215ENST00000622697 TAOK1Q7L7X3 1001 aa17.72■□□□□ 0.43
GABRB3-215ENST00000622697 NLRX1Q86UT6 975 aa17.72■□□□□ 0.43
GABRB3-215ENST00000622697 LIG3P49916 1009 aa17.72■□□□□ 0.43
GABRB3-215ENST00000622697 MAP3K9P80192 1104 aa17.72■□□□□ 0.43
GABRB3-215ENST00000622697 RASA3Q14644 834 aa17.72■□□□□ 0.43
GABRB3-215ENST00000622697 STAG1Q8WVM7 1258 aa17.72■□□□□ 0.43
GABRB3-215ENST00000622697 IFNB1P01574 187 aa17.72■□□□□ 0.43
GABRB3-215ENST00000622697 SLC7A5Q01650 507 aa17.72■□□□□ 0.43
GABRB3-215ENST00000622697 ABCB5Q2M3G0 1257 aa17.72■□□□□ 0.43
GABRB3-215ENST00000622697 ODR4Q5SWX8 454 aa17.72■□□□□ 0.43
GABRB3-215ENST00000622697 TAB3Q8N5C8 712 aaPredicted RBP17.72■□□□□ 0.43
GABRB3-215ENST00000622697 DBNDD1Q9H9R9 158 aa17.72■□□□□ 0.43
GABRB3-215ENST00000622697 LEMD3Q9Y2U8 911 aa17.72■□□□□ 0.43
GABRB3-215ENST00000622697 EPB41L5Q9HCM4 733 aa17.72■□□□□ 0.43
GABRB3-215ENST00000622697 CLRN2A0PK11 232 aa17.72■□□□□ 0.43
GABRB3-215ENST00000622697 TTLL1O95922 423 aa17.72■□□□□ 0.43
GABRB3-215ENST00000622697 AK8Q96MA6 479 aa17.72■□□□□ 0.43
GABRB3-215ENST00000622697 CUEDC2Q9H467 287 aa17.72■□□□□ 0.43
GABRB3-215ENST00000622697 GOLGA8KD6RF30 607 aa17.71■□□□□ 0.43
GABRB3-215ENST00000622697 ALDH3A1P30838 453 aa17.71■□□□□ 0.43
GABRB3-215ENST00000622697 CCT5P48643 541 aa17.71■□□□□ 0.43
GABRB3-215ENST00000622697 VPS37BQ9H9H4 285 aa17.71■□□□□ 0.43
GABRB3-215ENST00000622697 CAPN7Q9Y6W3 813 aa17.71■□□□□ 0.43
GABRB3-215ENST00000622697 UBN2Q6ZU65 1347 aa17.71■□□□□ 0.43
GABRB3-215ENST00000622697 MFAP3LO75121 409 aa17.71■□□□□ 0.43
GABRB3-215ENST00000622697 MAN2A1Q16706 1144 aa17.71■□□□□ 0.43
GABRB3-215ENST00000622697 ATG9AQ7Z3C6 839 aa17.71■□□□□ 0.43
GABRB3-215ENST00000622697 VSIG1Q86XK7 387 aa17.71■□□□□ 0.43
GABRB3-215ENST00000622697 MED4Q9NPJ6 270 aa17.71■□□□□ 0.43
GABRB3-215ENST00000622697 A6NNZ2 444 aa17.71■□□□□ 0.43
GABRB3-215ENST00000622697 TUBB8Q3ZCM7 444 aa17.71■□□□□ 0.43
GABRB3-215ENST00000622697 DISC1Q9NRI5 854 aa17.71■□□□□ 0.43
GABRB3-215ENST00000622697 NCAPD2Q15021 1401 aa17.71■□□□□ 0.42
GABRB3-215ENST00000622697 RNF40O75150 1001 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 ARHGEF16Q5VV41 709 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 SH3RF3Q8TEJ3 882 aaPredicted RBP17.7■□□□□ 0.42
GABRB3-215ENST00000622697 PANX2Q96RD6 677 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 MAGEF1Q9HAY2 307 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 FAM184BQ9ULE4 1060 aa17.7■□□□□ 0.42
GABRB3-215ENST00000622697 PTPN22Q9Y2R2 807 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms