RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 LRRFIP1Q32MZ4 808 aaKnown RBP12.97□□□□□ -0.33
LINC00963-214ENST00000622680 RCSD1Q6JBY9 416 aa12.97□□□□□ -0.33
LINC00963-214ENST00000622680 PPP1R13LQ8WUF5 828 aa12.97□□□□□ -0.33
LINC00963-214ENST00000622680 THEGQ9P2T0 379 aa12.97□□□□□ -0.33
LINC00963-214ENST00000622680 MSRAQ9UJ68 235 aa12.97□□□□□ -0.33
LINC00963-214ENST00000622680 PCDHB15Q9Y5E8 787 aa12.97□□□□□ -0.33
LINC00963-214ENST00000622680 FRMPD2Q68DX3 1309 aaPredicted RBP12.96□□□□□ -0.33
LINC00963-214ENST00000622680 SALL3Q9BXA9 1300 aa12.96□□□□□ -0.33
LINC00963-214ENST00000622680 NFIBO00712 420 aa12.96□□□□□ -0.33
LINC00963-214ENST00000622680 PLA2G6O60733 806 aa12.96□□□□□ -0.33
LINC00963-214ENST00000622680 CABYRO75952 493 aa12.96□□□□□ -0.33
LINC00963-214ENST00000622680 FGBP02675 491 aa12.96□□□□□ -0.33
LINC00963-214ENST00000622680 MYOGP15173 224 aa12.96□□□□□ -0.33
LINC00963-214ENST00000622680 IGFBP4P22692 258 aa12.96□□□□□ -0.33
LINC00963-214ENST00000622680 TTBK2Q6IQ55 1244 aa12.96□□□□□ -0.33
LINC00963-214ENST00000622680 SLC30A10Q6XR72 485 aa12.96□□□□□ -0.33
LINC00963-214ENST00000622680 KIAA1211Q6ZU35 1233 aa12.96□□□□□ -0.33
LINC00963-214ENST00000622680 VWCEQ96DN2 955 aa12.96□□□□□ -0.33
LINC00963-214ENST00000622680 VTA1Q9NP79 307 aa12.96□□□□□ -0.33
LINC00963-214ENST00000622680 TOMM22Q9NS69 142 aa12.96□□□□□ -0.33
LINC00963-214ENST00000622680 ZBBXA8MT70 800 aa12.95□□□□□ -0.34
LINC00963-214ENST00000622680 TNFRSF10AO00220 468 aa12.95□□□□□ -0.34
LINC00963-214ENST00000622680 ICAM1P05362 532 aa12.95□□□□□ -0.34
LINC00963-214ENST00000622680 CYP2C9P11712 490 aa12.95□□□□□ -0.34
LINC00963-214ENST00000622680 ALDH5A1P51649 535 aaPredicted RBP12.95□□□□□ -0.34
LINC00963-214ENST00000622680 BAATQ14032 418 aaPredicted RBP12.95□□□□□ -0.34
LINC00963-214ENST00000622680 RRP12Q5JTH9 1297 aaKnown RBP12.95□□□□□ -0.34
LINC00963-214ENST00000622680 AKNAD1Q5T1N1 836 aa12.95□□□□□ -0.34
LINC00963-214ENST00000622680 MICALL1Q8N3F8 863 aa12.95□□□□□ -0.34
LINC00963-214ENST00000622680 DCAF4Q8WV16 495 aa12.95□□□□□ -0.34
LINC00963-214ENST00000622680 ALDH8A1Q9H2A2 487 aaPredicted RBP12.95□□□□□ -0.34
LINC00963-214ENST00000622680 MTIF3Q9H2K0 278 aaKnown RBP12.95□□□□□ -0.34
LINC00963-214ENST00000622680 RANBP17Q9H2T7 1088 aaKnown RBP12.95□□□□□ -0.34
LINC00963-214ENST00000622680 SLC28A3Q9HAS3 691 aa12.95□□□□□ -0.34
LINC00963-214ENST00000622680 TRMT13Q9NUP7 481 aaKnown RBP12.95□□□□□ -0.34
LINC00963-214ENST00000622680 PTPDC1A2A3K4 754 aa12.94□□□□□ -0.34
LINC00963-214ENST00000622680 ZEB2O60315 1214 aa12.94□□□□□ -0.34
LINC00963-214ENST00000622680 MYL3P08590 195 aa12.94□□□□□ -0.34
LINC00963-214ENST00000622680 DUSP28Q4G0W2 176 aa12.94□□□□□ -0.34
LINC00963-214ENST00000622680 SYDE2Q5VT97 1194 aa12.94□□□□□ -0.34
LINC00963-214ENST00000622680 PPP2R2DQ66LE6 453 aa12.94□□□□□ -0.34
LINC00963-214ENST00000622680 IQSEC1Q6DN90 963 aa12.94□□□□□ -0.34
LINC00963-214ENST00000622680 MORC4Q8TE76 937 aa12.94□□□□□ -0.34
LINC00963-214ENST00000622680 GPCPD1Q9NPB8 672 aa12.94□□□□□ -0.34
LINC00963-214ENST00000622680 RAPGEFL1Q9UHV5 662 aa12.94□□□□□ -0.34
LINC00963-214ENST00000622680 TNKSO95271 1327 aa12.93□□□□□ -0.34
LINC00963-214ENST00000622680 A0A0D9SFI3 127 aa12.93□□□□□ -0.34
LINC00963-214ENST00000622680 ORC4O43929 436 aa12.93□□□□□ -0.34
LINC00963-214ENST00000622680 CALML3P27482 149 aa12.93□□□□□ -0.34
LINC00963-214ENST00000622680 PURAQ00577 322 aaKnown RBP12.93□□□□□ -0.34
LINC00963-214ENST00000622680 TTLL4Q14679 1199 aa12.93□□□□□ -0.34
LINC00963-214ENST00000622680 PPP4R3BQ5MIZ7 849 aa12.93□□□□□ -0.34
LINC00963-214ENST00000622680 DEFB128Q7Z7B8 93 aa12.93□□□□□ -0.34
LINC00963-214ENST00000622680 ADAMTS19Q8TE59 1207 aa12.93□□□□□ -0.34
LINC00963-214ENST00000622680 TMEM47Q9BQJ4 181 aa12.93□□□□□ -0.34
LINC00963-214ENST00000622680 WDR11Q9BZH6 1224 aa12.93□□□□□ -0.34
LINC00963-214ENST00000622680 ANAPC4Q9UJX5 808 aa12.93□□□□□ -0.34
LINC00963-214ENST00000622680 SLC4A7Q9Y6M7 1214 aa12.93□□□□□ -0.34
LINC00963-214ENST00000622680 MYO7AQ13402 2215 aa12.93□□□□□ -0.34
LINC00963-214ENST00000622680 RALGAPA2Q2PPJ7 1873 aa12.93□□□□□ -0.34
LINC00963-214ENST00000622680 RBAK-RBAKDNI3L0D1 243 aa12.92□□□□□ -0.34
LINC00963-214ENST00000622680 NOVP48745 357 aa12.92□□□□□ -0.34
LINC00963-214ENST00000622680 HAND2P61296 217 aa12.92□□□□□ -0.34
LINC00963-214ENST00000622680 FAM47CQ5HY64 1035 aa12.92□□□□□ -0.34
LINC00963-214ENST00000622680 BTNL9Q6UXG8 535 aa12.92□□□□□ -0.34
LINC00963-214ENST00000622680 OR6J1Q8NGC5 347 aa12.92□□□□□ -0.34
LINC00963-214ENST00000622680 ATXN2LQ8WWM7 1075 aaKnown RBP12.92□□□□□ -0.34
LINC00963-214ENST00000622680 COPS5Q92905 334 aa12.92□□□□□ -0.34
LINC00963-214ENST00000622680 FAM227BQ96M60 508 aa12.92□□□□□ -0.34
LINC00963-214ENST00000622680 ASB2Q96Q27 587 aa12.92□□□□□ -0.34
LINC00963-214ENST00000622680 POLR3EQ9NVU0 708 aa12.92□□□□□ -0.34
LINC00963-214ENST00000622680 ADD3Q9UEY8 706 aaKnown RBP12.92□□□□□ -0.34
LINC00963-214ENST00000622680 Q9Y3F1 56 aa12.92□□□□□ -0.34
LINC00963-214ENST00000622680 C5orf42Q9H799 3197 aa12.92□□□□□ -0.34
LINC00963-214ENST00000622680 KIAA1671Q9BY89 1806 aa12.92□□□□□ -0.34
LINC00963-214ENST00000622680 TOP1P11387 765 aaKnown RBP12.91□□□□□ -0.34
LINC00963-214ENST00000622680 ATP2A2P16615 1042 aaKnown RBP12.91□□□□□ -0.34
LINC00963-214ENST00000622680 ZNF589Q86UQ0 364 aaPredicted RBP12.91□□□□□ -0.34
LINC00963-214ENST00000622680 CLEC4DQ8WXI8 215 aa12.91□□□□□ -0.34
LINC00963-214ENST00000622680 NECAB3Q96P71 396 aaPredicted RBP12.91□□□□□ -0.34
LINC00963-214ENST00000622680 CPVLQ9H3G5 476 aa12.91□□□□□ -0.34
LINC00963-214ENST00000622680 CERS4Q9HA82 394 aa12.91□□□□□ -0.34
LINC00963-214ENST00000622680 PCDHA11Q9Y5I1 949 aa12.91□□□□□ -0.34
LINC00963-214ENST00000622680 RBM47A0AV96 593 aaKnown RBP12.9□□□□□ -0.34
LINC00963-214ENST00000622680 EPOPA6NHQ4 379 aa12.9□□□□□ -0.34
LINC00963-214ENST00000622680 RFXAPO00287 272 aa12.9□□□□□ -0.34
LINC00963-214ENST00000622680 ARHGEF15O94989 841 aa12.9□□□□□ -0.34
LINC00963-214ENST00000622680 FGAP02671 866 aa12.9□□□□□ -0.34
LINC00963-214ENST00000622680 CA3P07451 260 aa12.9□□□□□ -0.34
LINC00963-214ENST00000622680 FGRP09769 529 aa12.9□□□□□ -0.34
LINC00963-214ENST00000622680 PDHBP11177 359 aa12.9□□□□□ -0.34
LINC00963-214ENST00000622680 COL9A1P20849 921 aa12.9□□□□□ -0.34
LINC00963-214ENST00000622680 CPT1AP50416 773 aa12.9□□□□□ -0.34
LINC00963-214ENST00000622680 CHMP4BP1P59074 171 aa12.9□□□□□ -0.34
LINC00963-214ENST00000622680 RPS6P62753 249 aaKnown RBP12.9□□□□□ -0.34
LINC00963-214ENST00000622680 MRPS5P82675 430 aaKnown RBP12.9□□□□□ -0.34
LINC00963-214ENST00000622680 TFF2Q03403 129 aa12.9□□□□□ -0.34
LINC00963-214ENST00000622680 PDE4DQ08499 809 aa12.9□□□□□ -0.34
LINC00963-214ENST00000622680 PPP2R5BQ15173 497 aa12.9□□□□□ -0.34
LINC00963-214ENST00000622680 NBPF20Q3BBV1 942 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms