RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 RMND1Q9NWS8 449 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 PODXL2Q9NZ53 605 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 SAP30BPQ9UHR5 308 aaKnown RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 CAPN11Q9UMQ6 739 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 L1RE1Q9UN81 338 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 TFR2Q9UP52 801 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 EPN1Q9Y6I3 576 aaPredicted RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 ZNF638Q14966 1978 aaKnown RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 ABCB11O95342 1321 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 MYO3BQ8WXR4 1341 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 PAPPA2Q9BXP8 1791 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 EVPLQ92817 2033 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 ZSWIM8A7E2V4 1837 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 DICER1Q9UPY3 1922 aaKnown RBP3.62□□□□□ -1.83
U1.39-201ENST00000621562 COL2A1P02458 1487 aaPredicted RBP3.62□□□□□ -1.83
U1.39-201ENST00000621562 OTOFQ9HC10 1997 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 CCDC194A0A1B0GVG4 234 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 CTAGE9A4FU28 777 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 MYMKA6NI61 221 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 NUTM2BA6NNL0 878 aaPredicted RBP3.62□□□□□ -1.83
U1.39-201ENST00000621562 USP17L5A8MUK1 530 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 NUTM2EB1AL46 878 aaPredicted RBP3.62□□□□□ -1.83
U1.39-201ENST00000621562 EIF3CLB5ME19 914 aaKnown RBP3.62□□□□□ -1.83
U1.39-201ENST00000621562 KLRF2D3W0D1 207 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 POTEB2H3BUK9 544 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 hCG_1984214I3L0E3 225 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 PDE2AO00408 941 aaPredicted RBP3.62□□□□□ -1.83
U1.39-201ENST00000621562 PSMA7O14818 248 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 PJA2O43164 708 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 KIF5CO60282 957 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 TDP2O95551 362 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 ATP1A1P05023 1023 aaKnown RBP3.62□□□□□ -1.83
U1.39-201ENST00000621562 GOLGA8HP0CJ92 632 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 TSPY3P0CV98 308 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 TSPY8P0CW00 308 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 ZBTB48P10074 688 aaPredicted RBP3.62□□□□□ -1.83
U1.39-201ENST00000621562 PDHBP11177 359 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 GYS1P13807 737 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 HOXA10P31260 410 aaPredicted RBP3.62□□□□□ -1.83
U1.39-201ENST00000621562 DNM2P50570 870 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 FXR2P51116 673 aaKnown RBP eCLIP3.62□□□□□ -1.83
U1.39-201ENST00000621562 USP14P54578 494 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 NAPAP54920 295 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 GSTO1P78417 241 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 UBXN1Q04323 297 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 NONOQ15233 471 aaKnown RBP eCLIP3.62□□□□□ -1.83
U1.39-201ENST00000621562 ASTE1Q2TB18 679 aaPredicted RBP3.62□□□□□ -1.83
U1.39-201ENST00000621562 MUM1L1Q5H9M0 696 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 HYIQ5T013 277 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 ANKRD40Q6AI12 368 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 NCAPH2Q6IBW4 605 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 CENPPQ6IPU0 288 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 DPY19L2P1Q6NXN4 242 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 PPP1R18Q6NYC8 613 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 WDR93Q6P2C0 686 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 USP17L2Q6R6M4 530 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 TPTE2Q6XPS3 522 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 DTHD1Q6ZMT9 781 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 NEK8Q86SG6 692 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 CERS3Q8IU89 383 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 CLEC10AQ8IUN9 316 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 TEX11Q8IYF3 940 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 CERS5Q8N5B7 392 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 ZNF713Q8N859 430 aaPredicted RBP3.62□□□□□ -1.83
U1.39-201ENST00000621562 CEP112Q8N8E3 955 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 CNBD1Q8NA66 436 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 GLIS3Q8NEA6 775 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 OR8K1Q8NGG5 319 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 OLIG1Q8TAK6 271 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 CRYGNQ8WXF5 182 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 BAP1Q92560 729 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 HPS3Q969F9 1004 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 DNAJC19Q96DA6 116 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 CEP95Q96GE4 821 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 CCDC34Q96HJ3 373 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 DHTKD1Q96HY7 919 aaPredicted RBP3.62□□□□□ -1.83
U1.39-201ENST00000621562 TRIM47Q96LD4 638 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 MBOAT7Q96N66 472 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 PIGSQ96S52 555 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 MMS19Q96T76 1030 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 EYA3Q99504 573 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 PLIN2Q99541 437 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 EIF3CQ99613 913 aaKnown RBP3.62□□□□□ -1.83
U1.39-201ENST00000621562 TUBGCP2Q9BSJ2 902 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 FGFBP2Q9BYJ0 223 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 LACRTQ9GZZ8 138 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 ZSWIM4Q9H7M6 989 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 DNAJC18Q9H819 358 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 SUGCTQ9HAC7 445 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 CD209Q9NNX6 404 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 ABCB6Q9NP58 842 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 DDX4Q9NQI0 724 aaKnown RBP3.62□□□□□ -1.83
U1.39-201ENST00000621562 AGPAT5Q9NUQ2 364 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 EXOC1Q9NV70 894 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 TMEM260Q9NX78 707 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 PSD3Q9NYI0 1048 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 HDAC6Q9UBN7 1215 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 STK17AQ9UEE5 414 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 POLLQ9UGP5 575 aa3.62□□□□□ -1.83
U1.39-201ENST00000621562 PUF60Q9UHX1 559 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms