RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 CDC23Q9UJX2 597 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 ATP8A1Q9Y2Q0 1164 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 MCF2P10911 925 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 TCP1P17987 556 aaKnown RBP10.78□□□□□ -0.68
COL4A6-210ENST00000621266 HERC4Q5GLZ8 1057 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-210ENST00000621266 NCAPH2Q6IBW4 605 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 THOC1Q96FV9 657 aaKnown RBP10.78□□□□□ -0.68
COL4A6-210ENST00000621266 ZRANB2O95218 330 aaKnown RBP eCLIP10.78□□□□□ -0.68
COL4A6-210ENST00000621266 DAB2P98082 770 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 PSMD2Q13200 908 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 DLGAP5Q15398 846 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 TRIM56Q9BRZ2 755 aaKnown RBP10.78□□□□□ -0.68
COL4A6-210ENST00000621266 FIS1Q9Y3D6 152 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 PTPRTO14522 1441 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 WDR91A4D1P6 747 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 CFLARO15519 480 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 EPHB4P54760 987 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 OCA2Q04671 838 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 CCDC117Q8IWD4 279 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-210ENST00000621266 RDH13Q8NBN7 331 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 OTUD7AQ8TE49 926 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-210ENST00000621266 PHKBQ93100 1093 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 AATFQ9NY61 560 aaKnown RBP eCLIP10.78□□□□□ -0.68
COL4A6-210ENST00000621266 TBK1Q9UHD2 729 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 G3BP2Q9UN86 482 aaKnown RBP10.78□□□□□ -0.68
COL4A6-210ENST00000621266 CSADQ9Y600 493 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 PDE8AO60658 829 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 GPC4O75487 556 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 PARP1P09874 1014 aaKnown RBP10.78□□□□□ -0.68
COL4A6-210ENST00000621266 SCNN1DP51172 638 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 NEK2P51955 445 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 SLC8A3P57103 927 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 EHHADHQ08426 723 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 ZBTB41Q5SVQ8 909 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 MAP7D3Q8IWC1 876 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 DIS3L2Q8IYB7 885 aaKnown RBP10.78□□□□□ -0.68
COL4A6-210ENST00000621266 PACSIN2Q9UNF0 486 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-210ENST00000621266 CHUKO15111 745 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 MYCLP12524 364 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-210ENST00000621266 RNASELQ05823 741 aaKnown RBP10.78□□□□□ -0.68
COL4A6-210ENST00000621266 EN1Q05925 392 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-210ENST00000621266 TCP11X2Q5H9J9 407 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 ANKRD13CQ8N6S4 541 aa10.78□□□□□ -0.68
COL4A6-210ENST00000621266 KRT81Q14533 505 aa10.77□□□□□ -0.68
COL4A6-210ENST00000621266 USPL1Q5W0Q7 1092 aa10.77□□□□□ -0.68
COL4A6-210ENST00000621266 UNC5CLQ8IV45 518 aa10.77□□□□□ -0.68
COL4A6-210ENST00000621266 ZNF280CQ8ND82 737 aa10.77□□□□□ -0.68
COL4A6-210ENST00000621266 NOVA2Q9UNW9 492 aaKnown RBP10.77□□□□□ -0.68
COL4A6-210ENST00000621266 HDLBPQ00341 1268 aaKnown RBP10.77□□□□□ -0.69
COL4A6-210ENST00000621266 MYCT1Q8N699 235 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 MAD1L1Q9Y6D9 718 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 V9GY48 417 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-210ENST00000621266 EXOC3O60645 756 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 COBLO75128 1261 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 SMTNP53814 917 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 RWDD2BP57060 319 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 GTF2IP78347 998 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 PUM3Q15397 648 aaKnown RBP10.77□□□□□ -0.69
COL4A6-210ENST00000621266 FBXO38Q6PIJ6 1188 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 OTUD6AQ7L8S5 288 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 TTC6Q86TZ1 520 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 FGD4Q96M96 766 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 LLPHQ9BRT6 129 aaKnown RBP10.77□□□□□ -0.69
COL4A6-210ENST00000621266 MYL10Q9BUA6 226 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 MRPL44Q9H9J2 332 aaKnown RBP10.77□□□□□ -0.69
COL4A6-210ENST00000621266 KIAA1468Q9P260 1216 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 KCNJ14Q9UNX9 436 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 GINS2Q9Y248 185 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 CD19P15391 556 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 YWHAGP61981 247 aaKnown RBP eCLIP10.77□□□□□ -0.69
COL4A6-210ENST00000621266 RASSF7Q02833 373 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 SLC12A1Q13621 1099 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 CCDC84Q86UT8 332 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-210ENST00000621266 SULF1Q8IWU6 871 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 OSBPL1AQ9BXW6 950 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 DDX28Q9NUL7 540 aaKnown RBP10.77□□□□□ -0.69
COL4A6-210ENST00000621266 FANCLQ9NW38 375 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 B4DLN1 442 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 HEXIM1O94992 359 aaKnown RBP10.77□□□□□ -0.69
COL4A6-210ENST00000621266 NR1D1P20393 614 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 ECE1P42892 770 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 MRPL12P52815 198 aaKnown RBP10.77□□□□□ -0.69
COL4A6-210ENST00000621266 TNNI3KQ59H18 835 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 FLAD1Q8NFF5 587 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 SNX29Q8TEQ0 813 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 FPGT-TNNI3KV9GXZ4 949 aa10.77□□□□□ -0.69
COL4A6-210ENST00000621266 GSTA4O15217 222 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 SERPINI2O75830 405 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 MCUQ8NE86 351 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 DDX39AO00148 427 aaKnown RBP10.76□□□□□ -0.69
COL4A6-210ENST00000621266 MBD4O95243 580 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 INHBAP08476 426 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 NCF2P19878 526 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-210ENST00000621266 CXCR5P32302 372 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 ZNF827Q17R98 1081 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 CAPRIN2Q6IMN6 1127 aaKnown RBP10.76□□□□□ -0.69
COL4A6-210ENST00000621266 PASKQ96RG2 1323 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 ESRRAP11474 423 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-210ENST00000621266 PFKFB1P16118 471 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 SLC7A5Q01650 507 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms