RNA–Protein interactions for RNA: ENST00000620879.4

GTF2I-218, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2I, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-218ENST00000620879 MCTP2Q6DN12 878 aa13.58□□□□□ -0.23
GTF2I-218ENST00000620879 TICAM2Q86XR7 235 aa13.58□□□□□ -0.23
GTF2I-218ENST00000620879 GOLGA1Q92805 767 aa13.58□□□□□ -0.23
GTF2I-218ENST00000620879 ANO3Q9BYT9 981 aa13.58□□□□□ -0.23
GTF2I-218ENST00000620879 CNTNAP4Q9C0A0 1308 aa13.58□□□□□ -0.24
GTF2I-218ENST00000620879 KIAA0754O94854 1291 aa13.58□□□□□ -0.24
GTF2I-218ENST00000620879 ANKRD13CQ8N6S4 541 aa13.58□□□□□ -0.24
GTF2I-218ENST00000620879 CEP112Q8N8E3 955 aa13.58□□□□□ -0.24
GTF2I-218ENST00000620879 STK24Q9Y6E0 443 aa13.58□□□□□ -0.24
GTF2I-218ENST00000620879 POTEMA6NI47 508 aa13.58□□□□□ -0.24
GTF2I-218ENST00000620879 GYS1P13807 737 aa13.58□□□□□ -0.24
GTF2I-218ENST00000620879 EVCP57679 992 aa13.58□□□□□ -0.24
GTF2I-218ENST00000620879 MAP3K9P80192 1104 aa13.58□□□□□ -0.24
GTF2I-218ENST00000620879 KRT26Q7Z3Y9 468 aa13.58□□□□□ -0.24
GTF2I-218ENST00000620879 TSC1Q92574 1164 aa13.58□□□□□ -0.24
GTF2I-218ENST00000620879 NUP58Q9BVL2 599 aa13.58□□□□□ -0.24
GTF2I-218ENST00000620879 SAMSN1Q9NSI8 373 aaKnown RBP13.58□□□□□ -0.24
GTF2I-218ENST00000620879 TMEM260Q9NX78 707 aa13.58□□□□□ -0.24
GTF2I-218ENST00000620879 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.58□□□□□ -0.24
GTF2I-218ENST00000620879 BAZ2BQ9UIF8 2168 aaKnown RBP13.58□□□□□ -0.24
GTF2I-218ENST00000620879 COL3A1P02461 1466 aaPredicted RBP13.58□□□□□ -0.24
GTF2I-218ENST00000620879 CCDC66A2RUB6 948 aa13.57□□□□□ -0.24
GTF2I-218ENST00000620879 ATP1A3P13637 1013 aa13.57□□□□□ -0.24
GTF2I-218ENST00000620879 BMS1Q14692 1282 aaKnown RBP13.57□□□□□ -0.24
GTF2I-218ENST00000620879 PFKFB3Q16875 520 aaPredicted RBP13.57□□□□□ -0.24
GTF2I-218ENST00000620879 SGMS1Q86VZ5 419 aa13.57□□□□□ -0.24
GTF2I-218ENST00000620879 LSM14BQ9BX40 385 aaKnown RBP13.57□□□□□ -0.24
GTF2I-218ENST00000620879 ZHX1Q9UKY1 873 aaPredicted RBP13.57□□□□□ -0.24
GTF2I-218ENST00000620879 RIOK3O14730 519 aaKnown RBP13.57□□□□□ -0.24
GTF2I-218ENST00000620879 STX10O60499 249 aa13.57□□□□□ -0.24
GTF2I-218ENST00000620879 TSGA10IPQ3SY00 556 aa13.57□□□□□ -0.24
GTF2I-218ENST00000620879 PRAMEF18Q5VWM3 479 aa13.57□□□□□ -0.24
GTF2I-218ENST00000620879 FBXO33Q7Z6M2 555 aa13.57□□□□□ -0.24
GTF2I-218ENST00000620879 DPP9Q86TI2 863 aa13.57□□□□□ -0.24
GTF2I-218ENST00000620879 NEDD1Q8NHV4 660 aa13.57□□□□□ -0.24
GTF2I-218ENST00000620879 RNF181Q9P0P0 153 aa13.57□□□□□ -0.24
GTF2I-218ENST00000620879 TTBK2Q6IQ55 1244 aa13.57□□□□□ -0.24
GTF2I-218ENST00000620879 GSTA5Q7RTV2 222 aa13.57□□□□□ -0.24
GTF2I-218ENST00000620879 ZNF354CQ86Y25 554 aa13.57□□□□□ -0.24
GTF2I-218ENST00000620879 MAN1B1Q9UKM7 699 aa13.57□□□□□ -0.24
GTF2I-218ENST00000620879 GCFC2P16383 781 aaKnown RBP13.57□□□□□ -0.24
GTF2I-218ENST00000620879 ABCB4P21439 1286 aa13.57□□□□□ -0.24
GTF2I-218ENST00000620879 PTPREP23469 700 aa13.57□□□□□ -0.24
GTF2I-218ENST00000620879 USP14P54578 494 aa13.57□□□□□ -0.24
GTF2I-218ENST00000620879 VWA3BQ502W6 1294 aa13.57□□□□□ -0.24
GTF2I-218ENST00000620879 RNF169Q8NCN4 708 aa13.57□□□□□ -0.24
GTF2I-218ENST00000620879 ARHGEF28Q8N1W1 1705 aaKnown RBP13.56□□□□□ -0.24
GTF2I-218ENST00000620879 ZBTB5O15062 677 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 CLIC2O15247 247 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 POLGP54098 1239 aaPredicted RBP13.56□□□□□ -0.24
GTF2I-218ENST00000620879 ARMCX5Q6P1M9 558 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 PTF1AQ7RTS3 328 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 SRBD1Q8N5C6 995 aaKnown RBP13.56□□□□□ -0.24
GTF2I-218ENST00000620879 RFX7Q2KHR2 1363 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 PLEKHG2Q9H7P9 1386 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 PRPHP41219 470 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 C3orf67Q6ZVT6 689 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 CCDC25Q86WR0 208 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 COL23A1Q86Y22 540 aaPredicted RBP13.56□□□□□ -0.24
GTF2I-218ENST00000620879 TUBGCP2Q9BSJ2 902 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 BHMT2Q9H2M3 363 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 PLEKHA4Q9H4M7 779 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 CTTNBP2NLQ9P2B4 639 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 FAM205CA6NFA0 338 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 PP2D1A8MPX8 630 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 NR2F2P24468 414 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 LIG4P49917 911 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 QRICH1Q2TAL8 776 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 SFMBT2Q5VUG0 894 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 AK8Q96MA6 479 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 SLC4A9Q96Q91 983 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 RAVER2Q9HCJ3 691 aaKnown RBP13.56□□□□□ -0.24
GTF2I-218ENST00000620879 DCCP43146 1447 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 NCOA3Q9Y6Q9 1424 aa13.56□□□□□ -0.24
GTF2I-218ENST00000620879 SFI1A8K8P3 1242 aa13.55□□□□□ -0.24
GTF2I-218ENST00000620879 KIF28PB7ZC32 967 aa13.55□□□□□ -0.24
GTF2I-218ENST00000620879 LAD1O00515 517 aa13.55□□□□□ -0.24
GTF2I-218ENST00000620879 ANTXR2P58335 489 aa13.55□□□□□ -0.24
GTF2I-218ENST00000620879 POLR2FP61218 127 aaKnown RBP13.55□□□□□ -0.24
GTF2I-218ENST00000620879 IGDCC4Q8TDY8 1250 aa13.55□□□□□ -0.24
GTF2I-218ENST00000620879 CNOT6LQ96LI5 555 aaKnown RBP13.55□□□□□ -0.24
GTF2I-218ENST00000620879 NAPGQ99747 312 aaPredicted RBP13.55□□□□□ -0.24
GTF2I-218ENST00000620879 IFIH1Q9BYX4 1025 aaKnown RBP13.55□□□□□ -0.24
GTF2I-218ENST00000620879 SEPT9Q9UHD8 586 aaPredicted RBP13.55□□□□□ -0.24
GTF2I-218ENST00000620879 GDAQ9Y2T3 454 aa13.55□□□□□ -0.24
GTF2I-218ENST00000620879 PPP2R3AQ06190 1150 aa13.55□□□□□ -0.24
GTF2I-218ENST00000620879 GRIPAP1Q4V328 841 aa13.55□□□□□ -0.24
GTF2I-218ENST00000620879 ANKFY1Q9P2R3 1169 aa13.55□□□□□ -0.24
GTF2I-218ENST00000620879 MYO1AQ9UBC5 1043 aa13.55□□□□□ -0.24
GTF2I-218ENST00000620879 FLT1P17948 1338 aa13.55□□□□□ -0.24
GTF2I-218ENST00000620879 POLR1AO95602 1720 aaPredicted RBP13.55□□□□□ -0.24
GTF2I-218ENST00000620879 TLDC2A0PJX2 215 aa13.55□□□□□ -0.24
GTF2I-218ENST00000620879 LMAN1P49257 510 aa13.55□□□□□ -0.24
GTF2I-218ENST00000620879 CTTNQ14247 550 aaKnown RBP13.55□□□□□ -0.24
GTF2I-218ENST00000620879 RASA3Q14644 834 aa13.55□□□□□ -0.24
GTF2I-218ENST00000620879 PPM1KQ8N3J5 372 aa13.55□□□□□ -0.24
GTF2I-218ENST00000620879 TDRD7Q8NHU6 1098 aaKnown RBP13.55□□□□□ -0.24
GTF2I-218ENST00000620879 PIGOQ8TEQ8 1089 aa13.55□□□□□ -0.24
GTF2I-218ENST00000620879 MRFAP1L1Q96HT8 127 aa13.55□□□□□ -0.24
GTF2I-218ENST00000620879 FER1L4A9Z1Z3 1794 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms