RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 TRIM9Q9C026 710 aa9.05□□□□□ -0.96
GDNF-208ENST00000620847 MAGEC2Q9UBF1 373 aaPredicted RBP9.05□□□□□ -0.96
GDNF-208ENST00000620847 STX8Q9UNK0 236 aa9.05□□□□□ -0.96
GDNF-208ENST00000620847 B4DLN1 442 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 GNPATO15228 680 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 PPFIA4O75335 1185 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 CCNE1P24864 410 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 P2RX5Q93086 422 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 TUBGCP2Q9BSJ2 902 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 RTFDC1Q9BY42 306 aaPredicted RBP9.04□□□□□ -0.96
GDNF-208ENST00000620847 EXOC1Q9NV70 894 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 ANKIB1Q9P2G1 1089 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 GUCA1BQ9UMX6 200 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 FOCADQ5VW36 1801 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 NUTM2BA6NNL0 878 aaPredicted RBP9.04□□□□□ -0.96
GDNF-208ENST00000620847 NUTM2EB1AL46 878 aaPredicted RBP9.04□□□□□ -0.96
GDNF-208ENST00000620847 VSNL1P62760 191 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 FAM98CQ17RN3 349 aaKnown RBP9.04□□□□□ -0.96
GDNF-208ENST00000620847 COBLL1Q53SF7 1204 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 LRRC31Q6UY01 552 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 PAXIP1Q6ZW49 1069 aaPredicted RBP9.04□□□□□ -0.96
GDNF-208ENST00000620847 AMIGO3Q86WK7 504 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 CSGALNACT2Q8N6G5 542 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 RETREG2Q8NC44 543 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 BICDL2A1A5D9 508 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 CCNT1O60563 726 aaKnown RBP9.04□□□□□ -0.96
GDNF-208ENST00000620847 NAPAP54920 295 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 STK4Q13043 487 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 GRAPQ13588 217 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 NONOQ15233 471 aaKnown RBP eCLIP9.04□□□□□ -0.96
GDNF-208ENST00000620847 ANKRD40Q6AI12 368 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 NCAPH2Q6IBW4 605 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 C15orf52Q6ZUT6 534 aaKnown RBP9.04□□□□□ -0.96
GDNF-208ENST00000620847 C16orf86Q6ZW13 317 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 MAPKAPK5Q8IW41 473 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 NOA1Q8NC60 698 aaKnown RBP9.04□□□□□ -0.96
GDNF-208ENST00000620847 GRAPLQ8TC17 118 aaPredicted RBP9.04□□□□□ -0.96
GDNF-208ENST00000620847 NUP58Q9BVL2 599 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 FAM204AQ9H8W3 233 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 AGPAT5Q9NUQ2 364 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 SAP30BPQ9UHR5 308 aaKnown RBP9.04□□□□□ -0.96
GDNF-208ENST00000620847 MTMR7Q9Y216 660 aa9.04□□□□□ -0.96
GDNF-208ENST00000620847 NHSQ6T4R5 1651 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 A0A087WUV0 522 aaPredicted RBP9.03□□□□□ -0.96
GDNF-208ENST00000620847 SMCO2A6NFE2 343 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 LDHCP07864 332 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 SMARCA1P28370 1054 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 CDK8P49336 464 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 KRT83P78385 493 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 PDE4DQ08499 809 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 NFIXQ14938 502 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 TSR1Q2NL82 804 aaKnown RBP9.03□□□□□ -0.96
GDNF-208ENST00000620847 LETM2Q2VYF4 491 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 WDR93Q6P2C0 686 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 ZSCAN29Q8IWY8 852 aaPredicted RBP9.03□□□□□ -0.96
GDNF-208ENST00000620847 ARHGEF1Q92888 912 aaKnown RBP9.03□□□□□ -0.96
GDNF-208ENST00000620847 MMTAG2Q9BU76 263 aaKnown RBP9.03□□□□□ -0.96
GDNF-208ENST00000620847 CPVLQ9H3G5 476 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 SUGCTQ9HAC7 445 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 ZNF287Q9HBT7 754 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 C6orf50Q9HD87 102 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 PES1O00541 588 aaKnown RBP9.03□□□□□ -0.96
GDNF-208ENST00000620847 GNA11P29992 359 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 PPP1R2P41236 205 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 MIIPQ5JXC2 388 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 PAPD7Q5XG87 772 aaKnown RBP9.03□□□□□ -0.96
GDNF-208ENST00000620847 ZNF804AQ7Z570 1209 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 NEK8Q86SG6 692 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 TEX2Q8IWB9 1127 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 NEDD1Q8NHV4 660 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 AFAP1L1Q8TED9 768 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 CNOT6LQ96LI5 555 aaKnown RBP9.03□□□□□ -0.96
GDNF-208ENST00000620847 EYA3Q99504 573 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 LY75O60449 1722 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 NOVP48745 357 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 KLK7P49862 253 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 ZBED6P86452 979 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 ORC2Q13416 577 aaPredicted RBP9.03□□□□□ -0.96
GDNF-208ENST00000620847 FIGNQ5HY92 759 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 CCDC122Q5T0U0 273 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 MMS22LQ6ZRQ5 1243 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 FAM114A1Q8IWE2 563 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 CCDC170Q8IYT3 715 aa9.03□□□□□ -0.96
GDNF-208ENST00000620847 CCDC47Q96A33 483 aaKnown RBP9.03□□□□□ -0.96
GDNF-208ENST00000620847 RTCBQ9Y3I0 505 aaKnown RBP9.03□□□□□ -0.96
GDNF-208ENST00000620847 GPR75-ASB3A0A0A6YYF3 556 aa9.02□□□□□ -0.97
GDNF-208ENST00000620847 A0A1W2PQJ5 194 aa9.02□□□□□ -0.97
GDNF-208ENST00000620847 ATP1A1P05023 1023 aaKnown RBP9.02□□□□□ -0.97
GDNF-208ENST00000620847 FCER1AP12319 257 aa9.02□□□□□ -0.97
GDNF-208ENST00000620847 TRIM21P19474 475 aaKnown RBP9.02□□□□□ -0.97
GDNF-208ENST00000620847 MCM3P25205 808 aa9.02□□□□□ -0.97
GDNF-208ENST00000620847 TBC1D8BQ0IIM8 1120 aa9.02□□□□□ -0.97
GDNF-208ENST00000620847 MAP9Q49MG5 647 aa9.02□□□□□ -0.97
GDNF-208ENST00000620847 RRP36Q96EU6 259 aaKnown RBP9.02□□□□□ -0.97
GDNF-208ENST00000620847 ERGIC2Q96RQ1 377 aa9.02□□□□□ -0.97
GDNF-208ENST00000620847 NHEJ1Q9H9Q4 299 aaPredicted RBP9.02□□□□□ -0.97
GDNF-208ENST00000620847 HDAC6Q9UBN7 1215 aa9.02□□□□□ -0.97
GDNF-208ENST00000620847 TFR2Q9UP52 801 aa9.02□□□□□ -0.97
GDNF-208ENST00000620847 LOC102724159A0A0B4J2E5 919 aa9.02□□□□□ -0.97
GDNF-208ENST00000620847 RCCD1A6NED2 376 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms