RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 PDIA5Q14554 519 aa21.48■■□□□ 1.03
PSPC1-206ENST00000619300 KIAA1755Q5JYT7 1200 aa21.48■■□□□ 1.03
PSPC1-206ENST00000619300 LRRC8AQ8IWT6 810 aa21.48■■□□□ 1.03
PSPC1-206ENST00000619300 NAP1L4Q99733 375 aaKnown RBP21.48■■□□□ 1.03
PSPC1-206ENST00000619300 MEIS2O14770 477 aa21.47■■□□□ 1.03
PSPC1-206ENST00000619300 PLCG1P19174 1290 aa21.47■■□□□ 1.03
PSPC1-206ENST00000619300 RASA3Q14644 834 aa21.47■■□□□ 1.03
PSPC1-206ENST00000619300 TMEM266Q2M3C6 531 aa21.47■■□□□ 1.03
PSPC1-206ENST00000619300 MMTAG2Q9BU76 263 aaKnown RBP21.47■■□□□ 1.03
PSPC1-206ENST00000619300 SPTLC3Q9NUV7 552 aa21.47■■□□□ 1.03
PSPC1-206ENST00000619300 DDX25Q9UHL0 483 aaKnown RBP21.47■■□□□ 1.03
PSPC1-206ENST00000619300 PRR12Q9ULL5 1215 aa21.47■■□□□ 1.03
PSPC1-206ENST00000619300 BRCA1P38398 1863 aaKnown RBP21.47■■□□□ 1.03
PSPC1-206ENST00000619300 USP11P51784 963 aa21.46■■□□□ 1.03
PSPC1-206ENST00000619300 STAT2P52630 851 aa21.46■■□□□ 1.03
PSPC1-206ENST00000619300 GSDMDP57764 484 aa21.46■■□□□ 1.03
PSPC1-206ENST00000619300 SPATA1Q5VX52 437 aa21.46■■□□□ 1.03
PSPC1-206ENST00000619300 MCTP2Q6DN12 878 aa21.46■■□□□ 1.03
PSPC1-206ENST00000619300 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.46■■□□□ 1.03
PSPC1-206ENST00000619300 SMYD4Q8IYR2 804 aaPredicted RBP21.46■■□□□ 1.03
PSPC1-206ENST00000619300 C17orf53Q8N3J3 647 aaPredicted RBP21.46■■□□□ 1.03
PSPC1-206ENST00000619300 RAB34Q9BZG1 259 aa21.46■■□□□ 1.03
PSPC1-206ENST00000619300 LRWD1Q9UFC0 647 aa21.46■■□□□ 1.03
PSPC1-206ENST00000619300 CDK11BP21127 795 aaKnown RBP21.46■■□□□ 1.03
PSPC1-206ENST00000619300 AP3B2Q13367 1082 aa21.46■■□□□ 1.03
PSPC1-206ENST00000619300 ZNF658Q5TYW1 1059 aaPredicted RBP21.46■■□□□ 1.03
PSPC1-206ENST00000619300 KLHL10Q6JEL2 608 aa21.46■■□□□ 1.03
PSPC1-206ENST00000619300 LRRC15Q8TF66 581 aa21.46■■□□□ 1.03
PSPC1-206ENST00000619300 DPF2Q92785 391 aa21.46■■□□□ 1.03
PSPC1-206ENST00000619300 EGFRP00533 1210 aa21.45■■□□□ 1.02
PSPC1-206ENST00000619300 PTGER2P43116 358 aa21.45■■□□□ 1.02
PSPC1-206ENST00000619300 TNFAIP1Q13829 316 aa21.45■■□□□ 1.02
PSPC1-206ENST00000619300 ARID5BQ14865 1188 aa21.45■■□□□ 1.02
PSPC1-206ENST00000619300 USH1GQ495M9 461 aa21.45■■□□□ 1.02
PSPC1-206ENST00000619300 TMC6Q7Z403 805 aa21.45■■□□□ 1.02
PSPC1-206ENST00000619300 CALML4Q96GE6 196 aa21.45■■□□□ 1.02
PSPC1-206ENST00000619300 NAP1L5Q96NT1 182 aaPredicted RBP21.45■■□□□ 1.02
PSPC1-206ENST00000619300 ANO3Q9BYT9 981 aa21.45■■□□□ 1.02
PSPC1-206ENST00000619300 SH2D4AQ9H788 454 aa21.45■■□□□ 1.02
PSPC1-206ENST00000619300 VCPKMTQ9H867 229 aa21.45■■□□□ 1.02
PSPC1-206ENST00000619300 FZD9O00144 591 aa21.45■■□□□ 1.02
PSPC1-206ENST00000619300 SEMA3FQ13275 785 aa21.45■■□□□ 1.02
PSPC1-206ENST00000619300 FAM83BQ5T0W9 1011 aa21.45■■□□□ 1.02
PSPC1-206ENST00000619300 SAMSN1Q9NSI8 373 aaKnown RBP21.45■■□□□ 1.02
PSPC1-206ENST00000619300 ARFGEF1Q9Y6D6 1849 aa21.44■■□□□ 1.02
PSPC1-206ENST00000619300 ASNSP08243 561 aa21.44■■□□□ 1.02
PSPC1-206ENST00000619300 GMPSP49915 693 aaPredicted RBP21.44■■□□□ 1.02
PSPC1-206ENST00000619300 RASSF7Q02833 373 aa21.44■■□□□ 1.02
PSPC1-206ENST00000619300 KCNB1Q14721 858 aa21.44■■□□□ 1.02
PSPC1-206ENST00000619300 HAS1Q92839 578 aa21.44■■□□□ 1.02
PSPC1-206ENST00000619300 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.44■■□□□ 1.02
PSPC1-206ENST00000619300 CYP3A7-CYP3A51PA0A087WV96 503 aa21.43■■□□□ 1.02
PSPC1-206ENST00000619300 CYP3A7P24462 503 aa21.43■■□□□ 1.02
PSPC1-206ENST00000619300 STX17P56962 302 aa21.43■■□□□ 1.02
PSPC1-206ENST00000619300 TRAF1Q13077 416 aa21.43■■□□□ 1.02
PSPC1-206ENST00000619300 HSP90AA4PQ58FG1 418 aa21.43■■□□□ 1.02
PSPC1-206ENST00000619300 MICALL2Q8IY33 904 aa21.43■■□□□ 1.02
PSPC1-206ENST00000619300 CHURC1Q8WUH1 139 aa21.43■■□□□ 1.02
PSPC1-206ENST00000619300 TEPSINQ96N21 525 aa21.43■■□□□ 1.02
PSPC1-206ENST00000619300 SCAF8Q9UPN6 1271 aaKnown RBP21.43■■□□□ 1.02
PSPC1-206ENST00000619300 SYNRGQ9UMZ2 1314 aa21.43■■□□□ 1.02
PSPC1-206ENST00000619300 PHF20L1A8MW92 1017 aa21.43■■□□□ 1.02
PSPC1-206ENST00000619300 FOSP01100 380 aaPredicted RBP21.43■■□□□ 1.02
PSPC1-206ENST00000619300 PRELPP51888 382 aa21.43■■□□□ 1.02
PSPC1-206ENST00000619300 DHX8Q14562 1220 aaKnown RBP21.43■■□□□ 1.02
PSPC1-206ENST00000619300 CNOT7Q9UIV1 285 aaKnown RBP21.43■■□□□ 1.02
PSPC1-206ENST00000619300 GJA3Q9Y6H8 435 aa21.43■■□□□ 1.02
PSPC1-206ENST00000619300 KLRC4O43908 158 aa21.42■■□□□ 1.02
PSPC1-206ENST00000619300 MARCH6O60337 910 aa21.42■■□□□ 1.02
PSPC1-206ENST00000619300 PLA2G6O60733 806 aa21.42■■□□□ 1.02
PSPC1-206ENST00000619300 AMPD3Q01432 767 aa21.42■■□□□ 1.02
PSPC1-206ENST00000619300 CRYGNQ8WXF5 182 aa21.42■■□□□ 1.02
PSPC1-206ENST00000619300 C7orf25Q9BPX7 421 aa21.42■■□□□ 1.02
PSPC1-206ENST00000619300 RWDD2AQ9UIY3 292 aa21.42■■□□□ 1.02
PSPC1-206ENST00000619300 GRB10Q13322 594 aa21.41■■□□□ 1.02
PSPC1-206ENST00000619300 KMT5BQ4FZB7 885 aa21.41■■□□□ 1.02
PSPC1-206ENST00000619300 MOXD1Q6UVY6 613 aa21.41■■□□□ 1.02
PSPC1-206ENST00000619300 SAMD7Q7Z3H4 446 aa21.41■■□□□ 1.02
PSPC1-206ENST00000619300 MBOAT7Q96N66 472 aa21.41■■□□□ 1.02
PSPC1-206ENST00000619300 P2RX7Q99572 595 aaKnown RBP21.41■■□□□ 1.02
PSPC1-206ENST00000619300 CTNND2Q9UQB3 1225 aa21.41■■□□□ 1.02
PSPC1-206ENST00000619300 POTEMA6NI47 508 aa21.41■■□□□ 1.02
PSPC1-206ENST00000619300 RHOBTB3O94955 611 aa21.41■■□□□ 1.02
PSPC1-206ENST00000619300 KRT79Q5XKE5 535 aa21.41■■□□□ 1.02
PSPC1-206ENST00000619300 VSTM4Q8IW00 320 aa21.41■■□□□ 1.02
PSPC1-206ENST00000619300 GLIS2Q9BZE0 524 aaPredicted RBP21.41■■□□□ 1.02
PSPC1-206ENST00000619300 TRIM9Q9C026 710 aa21.41■■□□□ 1.02
PSPC1-206ENST00000619300 STK17AQ9UEE5 414 aa21.41■■□□□ 1.02
PSPC1-206ENST00000619300 PCDHA12Q9UN75 941 aa21.41■■□□□ 1.02
PSPC1-206ENST00000619300 PSDA5PKW4 1024 aaPredicted RBP21.4■■□□□ 1.02
PSPC1-206ENST00000619300 SPDYE3A6NKU9 549 aa21.4■■□□□ 1.02
PSPC1-206ENST00000619300 OPLAHO14841 1288 aa21.4■■□□□ 1.02
PSPC1-206ENST00000619300 SKILP12757 684 aa21.4■■□□□ 1.02
PSPC1-206ENST00000619300 ARHGAP4P98171 946 aa21.4■■□□□ 1.02
PSPC1-206ENST00000619300 ZYXQ15942 572 aaKnown RBP21.4■■□□□ 1.02
PSPC1-206ENST00000619300 FAM160B2Q86V87 743 aa21.4■■□□□ 1.02
PSPC1-206ENST00000619300 TEX2Q8IWB9 1127 aa21.4■■□□□ 1.02
PSPC1-206ENST00000619300 CCDC150Q8NCX0 1101 aa21.4■■□□□ 1.02
PSPC1-206ENST00000619300 PNMA5Q96PV4 448 aa21.4■■□□□ 1.02
PSPC1-206ENST00000619300 INTS13Q9NVM9 706 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms