RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 PAF1Q8N7H5 531 aa15.39■□□□□ 0.05
CIITA-213ENST00000618327 KCNG1Q9UIX4 513 aa15.39■□□□□ 0.05
CIITA-213ENST00000618327 ZBTB12Q9Y330 459 aaPredicted RBP15.39■□□□□ 0.05
CIITA-213ENST00000618327 MAP2K1Q02750 393 aaPredicted RBP15.39■□□□□ 0.05
CIITA-213ENST00000618327 VWA3BQ502W6 1294 aa15.39■□□□□ 0.05
CIITA-213ENST00000618327 RSBN1LQ6PCB5 846 aaPredicted RBP15.39■□□□□ 0.05
CIITA-213ENST00000618327 SYT10Q6XYQ8 523 aa15.39■□□□□ 0.05
CIITA-213ENST00000618327 C11orf57Q6ZUT1 292 aaPredicted RBP15.39■□□□□ 0.05
CIITA-213ENST00000618327 C16orf86Q6ZW13 317 aa15.39■□□□□ 0.05
CIITA-213ENST00000618327 WDR11Q9BZH6 1224 aa15.39■□□□□ 0.05
CIITA-213ENST00000618327 ANAPC4Q9UJX5 808 aa15.39■□□□□ 0.05
CIITA-213ENST00000618327 POTEB2H3BUK9 544 aa15.39■□□□□ 0.05
CIITA-213ENST00000618327 POLRMTO00411 1230 aaKnown RBP15.39■□□□□ 0.05
CIITA-213ENST00000618327 AP3B2Q13367 1082 aa15.39■□□□□ 0.05
CIITA-213ENST00000618327 ZNF569Q5MCW4 686 aa15.39■□□□□ 0.05
CIITA-213ENST00000618327 RESP18Q5W5W9 173 aa15.39■□□□□ 0.05
CIITA-213ENST00000618327 MRFAP1L1Q96HT8 127 aa15.39■□□□□ 0.05
CIITA-213ENST00000618327 WRNIP1Q96S55 665 aa15.39■□□□□ 0.05
CIITA-213ENST00000618327 STK17AQ9UEE5 414 aa15.39■□□□□ 0.05
CIITA-213ENST00000618327 GNA14O95837 355 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 ERCC5P28715 1186 aaPredicted RBP15.38■□□□□ 0.05
CIITA-213ENST00000618327 CTNNBL1Q8WYA6 563 aaPredicted RBP15.38■□□□□ 0.05
CIITA-213ENST00000618327 IWS1Q96ST2 819 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 SYNCQ9H7C4 482 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 LARSQ9P2J5 1176 aaKnown RBP15.38■□□□□ 0.05
CIITA-213ENST00000618327 ARHGAP6O43182 974 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 ENTPD3O75355 529 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 RASA1P20936 1047 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 CKAP4Q07065 602 aaKnown RBP15.38■□□□□ 0.05
CIITA-213ENST00000618327 KCTD2Q14681 263 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 CCDC122Q5T0U0 273 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 FAM178BQ8IXR5 827 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 PPP1R9BQ96SB3 815 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 SENP2Q9HC62 589 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 RNF181Q9P0P0 153 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 PLSCR1O15162 318 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 RIOK1Q9BRS2 568 aaKnown RBP15.38■□□□□ 0.05
CIITA-213ENST00000618327 GOLGA6L10A0A0M3HER8 536 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 KIF28PB7ZC32 967 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 MYL1P05976 194 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 FAM102BQ5T8I3 360 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 PPP1R18Q6NYC8 613 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 MICALCLQ6ZW33 695 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 TMTC1Q8IUR5 882 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 APOBEC3FQ8IUX4 373 aaKnown RBP15.38■□□□□ 0.05
CIITA-213ENST00000618327 ADGRF4Q8IZF3 695 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 LMBR1Q8WVP7 490 aa15.38■□□□□ 0.05
CIITA-213ENST00000618327 CTAGE15A4D2H0 777 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 SORBS3O60504 671 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 CTAGE8P0CG41 777 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 DNM2P50570 870 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 WDR44Q5JSH3 913 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 RNF187Q5TA31 235 aaPredicted RBP15.37■□□□□ 0.05
CIITA-213ENST00000618327 CTAGE6Q86UF2 777 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 CTAGE4Q8IX94 777 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 SLC5A4Q9NY91 659 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 SERPINA10Q9UK55 444 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 MAN1B1Q9UKM7 699 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 LMAN1P49257 510 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 ZNF579Q8NAF0 562 aaKnown RBP15.37■□□□□ 0.05
CIITA-213ENST00000618327 GINS2Q9Y248 185 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 ZHX2Q9Y6X8 837 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 USP17L15C9J2P7 530 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 USP17L13C9JLJ4 530 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 USP17L11C9JVI0 530 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 USP17L18D6R9N7 530 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 USP17L22D6RA61 530 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 USP17L17D6RBQ6 530 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 USP17L19D6RCP7 530 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 USP17L20D6RJB6 530 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 PSMD14O00487 310 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 USP17L24Q0WX57 530 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 QRICH1Q2TAL8 776 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 USP17L6PQ6QN14 398 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 KRT222Q8N1A0 295 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 IKBKBO14920 756 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 PLCG1P19174 1290 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 SMYD4Q8IYR2 804 aaPredicted RBP15.37■□□□□ 0.05
CIITA-213ENST00000618327 SLF1Q9BQI6 1058 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 SPZ1Q9BXG8 430 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 CCDC113Q9H0I3 377 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 FEM1BQ9UK73 627 aa15.37■□□□□ 0.05
CIITA-213ENST00000618327 LRP10Q7Z4F1 713 aa15.36■□□□□ 0.05
CIITA-213ENST00000618327 VGLL2Q8N8G2 317 aa15.36■□□□□ 0.05
CIITA-213ENST00000618327 FAM207AQ9NSI2 230 aaPredicted RBP15.36■□□□□ 0.05
CIITA-213ENST00000618327 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.36■□□□□ 0.05
CIITA-213ENST00000618327 OSBPP22059 807 aa15.36■□□□□ 0.05
CIITA-213ENST00000618327 APBB1IPQ7Z5R6 666 aaPredicted RBP15.36■□□□□ 0.05
CIITA-213ENST00000618327 CDAN1Q8IWY9 1227 aa15.36■□□□□ 0.05
CIITA-213ENST00000618327 MICALL2Q8IY33 904 aa15.36■□□□□ 0.05
CIITA-213ENST00000618327 GPATCH11Q8N954 259 aa15.36■□□□□ 0.05
CIITA-213ENST00000618327 PAGE5Q96GU1 130 aa15.36■□□□□ 0.05
CIITA-213ENST00000618327 PLVAPQ9BX97 442 aa15.36■□□□□ 0.05
CIITA-213ENST00000618327 MRC1P22897 1456 aa15.36■□□□□ 0.05
CIITA-213ENST00000618327 CCNA1P78396 465 aa15.36■□□□□ 0.05
CIITA-213ENST00000618327 RDH13Q8NBN7 331 aa15.36■□□□□ 0.05
CIITA-213ENST00000618327 ADD3Q9UEY8 706 aaKnown RBP15.36■□□□□ 0.05
CIITA-213ENST00000618327 SLU7O95391 586 aaKnown RBP15.35■□□□□ 0.05
CIITA-213ENST00000618327 SPP2Q13103 211 aa15.35■□□□□ 0.05
CIITA-213ENST00000618327 DISC1Q9NRI5 854 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms