RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 SPDL1Q96EA4 605 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 ATP10AO60312 1499 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 ZBTB7BO15156 539 aaPredicted RBP12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 PLA2G4DQ86XP0 818 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 LRRC47Q8N1G4 583 aaKnown RBP12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 ZBTB38Q8NAP3 1195 aaPredicted RBP12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 WHAMMQ8TF30 809 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 NEURL1BA8MQ27 555 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 ATP5JP18859 108 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 USP14P54578 494 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 SPDYE1Q8NFV5 336 aaPredicted RBP12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 TTC25Q96NG3 672 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 GOLGA8KD6RF30 607 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 H7C0C1 242 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 HNRNPDLO14979 420 aaKnown RBP12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 SMIM24O75264 130 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 CCND2P30279 289 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 SERPINB6P35237 376 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 ATP5OP48047 213 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 PHEXP78562 749 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 ADALQ6DHV7 355 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 HYOU1Q9Y4L1 999 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 SSH2Q76I76 1423 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 GUCY2FP51841 1108 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 SMYD2Q9NRG4 433 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 CASP2P42575 452 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 WHAMMP3Q1A5X7 153 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 SUPT20HL1Q3ZLR7 823 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 C1orf228Q6PIY5 440 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 KLHDC4Q8TBB5 520 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 CDHR1Q96JP9 859 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 DRC3Q9H069 523 aa12.17□□□□□ -0.46
CCDC144B-208ENST00000618081 SYNJ2BP-COX16A0A087WUM0 186 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 FOSP01100 380 aaPredicted RBP12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 KPNA2P52292 529 aaKnown RBP12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 ASPRV1Q53RT3 343 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 COX16Q9P0S2 106 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 SORBS3O60504 671 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 MYO1EQ12965 1108 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 KRT33BQ14525 404 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 ELF2Q15723 593 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 OLA1Q9NTK5 396 aaKnown RBP12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 KIF24Q5T7B8 1368 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 USP17L12C9JPN9 530 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 USP17L21D6R901 530 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 SCG2P13521 617 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 LONP1P36776 959 aaKnown RBP12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 MFAP3P55082 362 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 GPATCH4Q5T3I0 446 aaKnown RBP12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 SLC7A3Q8WY07 619 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 SUCLG2Q96I99 432 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 MCF2LO15068 1137 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 PPARGP37231 505 aaPredicted RBP12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 LRRC8CQ8TDW0 803 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 THEGQ9P2T0 379 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 ZNF148Q9UQR1 794 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 HSPA2P54652 639 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 SLC38A10Q9HBR0 1119 aa12.16□□□□□ -0.46
CCDC144B-208ENST00000618081 EVI5O60447 810 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 HIP1RO75146 1068 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 TTLL1O95922 423 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 ANXA13P27216 316 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 BRD3Q15059 726 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 TRIM42Q8IWZ5 723 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 EXOC3L4Q17RC7 722 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 KIAA0825Q8IV33 1275 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 ATP6V1E2Q96A05 226 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 CUEDC2Q9H467 287 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 TBX22Q9Y458 520 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 PEG3Q9GZU2 1588 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 RPN1P04843 607 aaKnown RBP12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 NLRP7Q8WX94 980 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 KIAA1468Q9P260 1216 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 SEMA3EO15041 775 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 RLBP1P12271 317 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 CIITAP33076 1130 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 STAT2P52630 851 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 DCLK2Q8N568 766 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 BICRAQ9NZM4 1560 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 APOL6Q9BWW8 343 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 WDR64B1ANS9 1081 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 ADAM9Q13443 819 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 CCDC127Q96BQ5 260 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 KDM5CP41229 1560 aa12.15□□□□□ -0.46
CCDC144B-208ENST00000618081 NVLO15381 856 aaKnown RBP12.15□□□□□ -0.47
CCDC144B-208ENST00000618081 SART1O43290 800 aaKnown RBP12.15□□□□□ -0.47
CCDC144B-208ENST00000618081 BAG2O95816 211 aa12.15□□□□□ -0.47
CCDC144B-208ENST00000618081 GAP43P17677 238 aa12.15□□□□□ -0.47
CCDC144B-208ENST00000618081 STX1BP61266 288 aa12.15□□□□□ -0.47
CCDC144B-208ENST00000618081 IFNL3Q8IZI9 196 aa12.15□□□□□ -0.47
CCDC144B-208ENST00000618081 DONSONQ9NYP3 566 aa12.15□□□□□ -0.47
CCDC144B-208ENST00000618081 SCNN1DP51172 638 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 ADKP55263 362 aaKnown RBP12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 ARMC9Q7Z3E5 817 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 CCHCR1Q8TD31 782 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 ZNF577Q9BSK1 485 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 RABEP2Q9H5N1 569 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 PCDHA1Q9Y5I3 950 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 ZC3H15Q8WU90 426 aaKnown RBP12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 SLC13A4Q9UKG4 626 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms