RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 PDLIM2Q96JY6 352 aa23.38■■□□□ 1.33
SDHA-220ENST00000617470 SH3GLB2Q9NR46 395 aa23.38■■□□□ 1.33
SDHA-220ENST00000617470 SLC45A1Q9Y2W3 748 aa23.38■■□□□ 1.33
SDHA-220ENST00000617470 CTAGE5O15320 804 aa23.37■■□□□ 1.33
SDHA-220ENST00000617470 CUTAO60888 179 aa23.37■■□□□ 1.33
SDHA-220ENST00000617470 NLRP5P59047 1200 aa23.37■■□□□ 1.33
SDHA-220ENST00000617470 HERVK_113P62684 666 aa23.37■■□□□ 1.33
SDHA-220ENST00000617470 CDC37Q16543 378 aaPredicted RBP23.37■■□□□ 1.33
SDHA-220ENST00000617470 WWC2Q6AWC2 1192 aa23.37■■□□□ 1.33
SDHA-220ENST00000617470 FBXO2Q9UK22 296 aaPredicted RBP23.37■■□□□ 1.33
SDHA-220ENST00000617470 VWA5AO00534 786 aa23.36■■□□□ 1.33
SDHA-220ENST00000617470 ZBED4O75132 1171 aa23.36■■□□□ 1.33
SDHA-220ENST00000617470 TM4SF4P48230 202 aa23.36■■□□□ 1.33
SDHA-220ENST00000617470 UVSSAQ2YD98 709 aa23.36■■□□□ 1.33
SDHA-220ENST00000617470 RESP18Q5W5W9 173 aa23.36■■□□□ 1.33
SDHA-220ENST00000617470 ATP2B1P20020 1258 aa23.36■■□□□ 1.33
SDHA-220ENST00000617470 GRIN1Q05586 938 aa23.36■■□□□ 1.33
SDHA-220ENST00000617470 CPXCR1Q8N123 301 aa23.36■■□□□ 1.33
SDHA-220ENST00000617470 PARK7Q99497 189 aaKnown RBP23.36■■□□□ 1.33
SDHA-220ENST00000617470 BRMS1Q9HCU9 246 aa23.36■■□□□ 1.33
SDHA-220ENST00000617470 MYPNQ86TC9 1320 aa23.35■■□□□ 1.33
SDHA-220ENST00000617470 STXBP3O00186 592 aa23.35■■□□□ 1.33
SDHA-220ENST00000617470 ZBTB5O15062 677 aa23.35■■□□□ 1.33
SDHA-220ENST00000617470 ZNF202O95125 648 aa23.35■■□□□ 1.33
SDHA-220ENST00000617470 PTPREP23469 700 aa23.35■■□□□ 1.33
SDHA-220ENST00000617470 TAF1CQ15572 869 aaPredicted RBP23.35■■□□□ 1.33
SDHA-220ENST00000617470 QRICH1Q2TAL8 776 aa23.35■■□□□ 1.33
SDHA-220ENST00000617470 KRI1Q8N9T8 703 aaKnown RBP23.35■■□□□ 1.33
SDHA-220ENST00000617470 PAGR1Q9BTK6 254 aa23.35■■□□□ 1.33
SDHA-220ENST00000617470 M0R2N6 131 aa23.34■■□□□ 1.33
SDHA-220ENST00000617470 MAP2K2P36507 400 aa23.34■■□□□ 1.33
SDHA-220ENST00000617470 ANP32BQ92688 251 aaKnown RBP23.34■■□□□ 1.33
SDHA-220ENST00000617470 RANBP17Q9H2T7 1088 aaKnown RBP23.34■■□□□ 1.33
SDHA-220ENST00000617470 SLC38A10Q9HBR0 1119 aa23.34■■□□□ 1.33
SDHA-220ENST00000617470 BARHL2Q9NY43 387 aa23.34■■□□□ 1.33
SDHA-220ENST00000617470 MORC2Q9Y6X9 1032 aaPredicted RBP23.34■■□□□ 1.33
SDHA-220ENST00000617470 PNMA6FA0A0J9YX94 578 aa23.34■■□□□ 1.33
SDHA-220ENST00000617470 PLS1Q14651 629 aa23.34■■□□□ 1.33
SDHA-220ENST00000617470 ANO6Q4KMQ2 910 aa23.34■■□□□ 1.33
SDHA-220ENST00000617470 RAVER2Q9HCJ3 691 aaKnown RBP23.34■■□□□ 1.33
SDHA-220ENST00000617470 PEX10O60683 326 aa23.33■■□□□ 1.33
SDHA-220ENST00000617470 USH1GQ495M9 461 aa23.33■■□□□ 1.33
SDHA-220ENST00000617470 SASS6Q6UVJ0 657 aa23.33■■□□□ 1.33
SDHA-220ENST00000617470 HEATR3Q7Z4Q2 680 aa23.33■■□□□ 1.33
SDHA-220ENST00000617470 REM2Q8IYK8 340 aaPredicted RBP23.33■■□□□ 1.33
SDHA-220ENST00000617470 ERCC4Q92889 916 aaPredicted RBP23.33■■□□□ 1.33
SDHA-220ENST00000617470 MTMR8Q96EF0 704 aa23.33■■□□□ 1.33
SDHA-220ENST00000617470 PCDHA4Q9UN74 947 aa23.33■■□□□ 1.33
SDHA-220ENST00000617470 FDX1P10109 184 aa23.32■■□□□ 1.32
SDHA-220ENST00000617470 CALML3P27482 149 aa23.32■■□□□ 1.32
SDHA-220ENST00000617470 BLIDQ8IZY5 108 aa23.32■■□□□ 1.32
SDHA-220ENST00000617470 ZCCHC17Q9NP64 241 aaKnown RBP23.32■■□□□ 1.32
SDHA-220ENST00000617470 ADAMTS5Q9UNA0 930 aa23.32■■□□□ 1.32
SDHA-220ENST00000617470 SRPRBQ9Y5M8 271 aaKnown RBP23.32■■□□□ 1.32
SDHA-220ENST00000617470 PIK3AP1Q6ZUJ8 805 aa23.32■■□□□ 1.32
SDHA-220ENST00000617470 FBXO11Q86XK2 927 aa23.32■■□□□ 1.32
SDHA-220ENST00000617470 FAM200AQ8TCP9 573 aa23.32■■□□□ 1.32
SDHA-220ENST00000617470 PARP14Q460N5 1801 aa23.32■■□□□ 1.32
SDHA-220ENST00000617470 RLFQ13129 1914 aa23.32■■□□□ 1.32
SDHA-220ENST00000617470 TAL1P17542 331 aaPredicted RBP23.31■■□□□ 1.32
SDHA-220ENST00000617470 TMEM132BQ14DG7 1078 aa23.31■■□□□ 1.32
SDHA-220ENST00000617470 SPECC1Q5M775 1068 aa23.31■■□□□ 1.32
SDHA-220ENST00000617470 LBX2Q6XYB7 198 aa23.31■■□□□ 1.32
SDHA-220ENST00000617470 MB21D1Q8N884 522 aa23.31■■□□□ 1.32
SDHA-220ENST00000617470 DAGLBQ8NCG7 672 aa23.31■■□□□ 1.32
SDHA-220ENST00000617470 AGBL1Q96MI9 1066 aa23.31■■□□□ 1.32
SDHA-220ENST00000617470 SDF4Q9BRK5 362 aa23.31■■□□□ 1.32
SDHA-220ENST00000617470 CCPG1Q9ULG6 757 aa23.31■■□□□ 1.32
SDHA-220ENST00000617470 CEP131Q9UPN4 1083 aa23.31■■□□□ 1.32
SDHA-220ENST00000617470 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.31■■□□□ 1.32
SDHA-220ENST00000617470 PPP1R11O60927 126 aaPredicted RBP23.31■■□□□ 1.32
SDHA-220ENST00000617470 SYKP43405 635 aa23.31■■□□□ 1.32
SDHA-220ENST00000617470 COA7Q96BR5 231 aa23.31■■□□□ 1.32
SDHA-220ENST00000617470 AMNQ9BXJ7 453 aa23.31■■□□□ 1.32
SDHA-220ENST00000617470 BTBD7Q9P203 1132 aa23.31■■□□□ 1.32
SDHA-220ENST00000617470 NOL7Q9UMY1 257 aaKnown RBP23.31■■□□□ 1.32
SDHA-220ENST00000617470 A0A087WWV3 80 aa23.3■■□□□ 1.32
SDHA-220ENST00000617470 ALDH1A1P00352 501 aa23.3■■□□□ 1.32
SDHA-220ENST00000617470 TTC38Q5R3I4 469 aa23.3■■□□□ 1.32
SDHA-220ENST00000617470 POTEEQ6S8J3 1075 aa23.3■■□□□ 1.32
SDHA-220ENST00000617470 ANKRD13CQ8N6S4 541 aa23.3■■□□□ 1.32
SDHA-220ENST00000617470 RASGRP4Q8TDF6 673 aa23.3■■□□□ 1.32
SDHA-220ENST00000617470 GTF3C2Q8WUA4 911 aaPredicted RBP23.3■■□□□ 1.32
SDHA-220ENST00000617470 TIGD1Q96MW7 591 aa23.3■■□□□ 1.32
SDHA-220ENST00000617470 DNAJC25Q9H1X3 360 aa23.3■■□□□ 1.32
SDHA-220ENST00000617470 ZFYVE28Q9HCC9 887 aa23.3■■□□□ 1.32
SDHA-220ENST00000617470 TXNRD2Q9NNW7 524 aa23.3■■□□□ 1.32
SDHA-220ENST00000617470 RBPJLQ9UBG7 517 aa23.3■■□□□ 1.32
SDHA-220ENST00000617470 PCDHA1Q9Y5I3 950 aa23.3■■□□□ 1.32
SDHA-220ENST00000617470 ICAM1P05362 532 aa23.29■■□□□ 1.32
SDHA-220ENST00000617470 ZNF174Q15697 407 aa23.29■■□□□ 1.32
SDHA-220ENST00000617470 SNRNP48Q6IEG0 339 aaKnown RBP23.29■■□□□ 1.32
SDHA-220ENST00000617470 ZNF579Q8NAF0 562 aaKnown RBP23.29■■□□□ 1.32
SDHA-220ENST00000617470 REPS2Q8NFH8 660 aa23.29■■□□□ 1.32
SDHA-220ENST00000617470 CBX8Q9HC52 389 aa23.29■■□□□ 1.32
SDHA-220ENST00000617470 RABGAP1Q9Y3P9 1069 aa23.29■■□□□ 1.32
SDHA-220ENST00000617470 ZNF536O15090 1300 aa23.29■■□□□ 1.32
SDHA-220ENST00000617470 AP5Z1O43299 807 aa23.29■■□□□ 1.32
SDHA-220ENST00000617470 GCLCP48506 637 aaPredicted RBP23.29■■□□□ 1.32
SDHA-220ENST00000617470 CRHR2Q13324 411 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms