RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 AGBL1Q96MI9 1066 aa10.11□□□□□ -0.79
GPC6-202ENST00000617456 C1QTNF1Q9BXJ1 281 aa10.11□□□□□ -0.79
GPC6-202ENST00000617456 NACAP1Q9BZK3 213 aa10.11□□□□□ -0.79
GPC6-202ENST00000617456 PDCL3Q9H2J4 239 aa10.11□□□□□ -0.79
GPC6-202ENST00000617456 ACAD9Q9H845 621 aa10.11□□□□□ -0.79
GPC6-202ENST00000617456 PDGFCQ9NRA1 345 aa10.11□□□□□ -0.79
GPC6-202ENST00000617456 RNF146Q9NTX7 359 aa10.11□□□□□ -0.79
GPC6-202ENST00000617456 ZBTB47Q9UFB7 747 aaPredicted RBP10.11□□□□□ -0.79
GPC6-202ENST00000617456 GNEQ9Y223 722 aaKnown RBP10.11□□□□□ -0.79
GPC6-202ENST00000617456 PCDHB15Q9Y5E8 787 aa10.11□□□□□ -0.79
GPC6-202ENST00000617456 PCDHA11Q9Y5I1 949 aa10.11□□□□□ -0.79
GPC6-202ENST00000617456 GBF1Q92538 1859 aa10.1□□□□□ -0.79
GPC6-202ENST00000617456 SOWAHBA6NEL2 793 aa10.1□□□□□ -0.79
GPC6-202ENST00000617456 ASB14A6NK59 587 aa10.1□□□□□ -0.79
GPC6-202ENST00000617456 TMEM232C9JQI7 657 aa10.1□□□□□ -0.79
GPC6-202ENST00000617456 GTPBP6O43824 516 aaPredicted RBP10.1□□□□□ -0.79
GPC6-202ENST00000617456 SMARCA5O60264 1052 aaPredicted RBP10.1□□□□□ -0.79
GPC6-202ENST00000617456 HSP90AA1P07900 732 aaKnown RBP10.1□□□□□ -0.79
GPC6-202ENST00000617456 BMP3P12645 472 aa10.1□□□□□ -0.79
GPC6-202ENST00000617456 ALAS1P13196 640 aa10.1□□□□□ -0.79
GPC6-202ENST00000617456 SNAP25P60880 206 aa10.1□□□□□ -0.79
GPC6-202ENST00000617456 NKX3-2P78367 333 aa10.1□□□□□ -0.79
GPC6-202ENST00000617456 TTLL4Q14679 1199 aa10.1□□□□□ -0.79
GPC6-202ENST00000617456 TMEM63BQ5T3F8 832 aa10.1□□□□□ -0.79
GPC6-202ENST00000617456 KRT40Q6A162 431 aa10.1□□□□□ -0.79
GPC6-202ENST00000617456 ZNF444Q8N0Y2 327 aaPredicted RBP10.1□□□□□ -0.79
GPC6-202ENST00000617456 CNPY4Q8N129 248 aa10.1□□□□□ -0.79
GPC6-202ENST00000617456 FAM133AQ8N9E0 248 aa10.1□□□□□ -0.79
GPC6-202ENST00000617456 PI4K2BQ8TCG2 481 aa10.1□□□□□ -0.79
GPC6-202ENST00000617456 OSBP2Q969R2 916 aa10.1□□□□□ -0.79
GPC6-202ENST00000617456 MKL1Q969V6 931 aa10.1□□□□□ -0.79
GPC6-202ENST00000617456 CEP95Q96GE4 821 aa10.1□□□□□ -0.79
GPC6-202ENST00000617456 PLCD4Q9BRC7 762 aa10.1□□□□□ -0.79
GPC6-202ENST00000617456 EPHX3Q9H6B9 360 aa10.1□□□□□ -0.79
GPC6-202ENST00000617456 A1CFQ9NQ94 594 aaKnown RBP10.1□□□□□ -0.79
GPC6-202ENST00000617456 IGKV6D-41A0A0C4DH26 115 aa10.09□□□□□ -0.79
GPC6-202ENST00000617456 EPOPA6NHQ4 379 aa10.09□□□□□ -0.79
GPC6-202ENST00000617456 GPAA1O43292 621 aa10.09□□□□□ -0.79
GPC6-202ENST00000617456 TTLL1O95922 423 aa10.09□□□□□ -0.79
GPC6-202ENST00000617456 APPP05067 770 aa10.09□□□□□ -0.79
GPC6-202ENST00000617456 CA3P07451 260 aa10.09□□□□□ -0.79
GPC6-202ENST00000617456 SLC3A2P08195 630 aaKnown RBP10.09□□□□□ -0.79
GPC6-202ENST00000617456 FDX1P10109 184 aa10.09□□□□□ -0.79
GPC6-202ENST00000617456 CYP2C9P11712 490 aa10.09□□□□□ -0.79
GPC6-202ENST00000617456 MX1P20591 662 aa10.09□□□□□ -0.79
GPC6-202ENST00000617456 PTMSP20962 102 aa10.09□□□□□ -0.79
GPC6-202ENST00000617456 TDO2P48775 406 aa10.09□□□□□ -0.79
GPC6-202ENST00000617456 NT5C2P49902 561 aa10.09□□□□□ -0.79
GPC6-202ENST00000617456 OAZ1P54368 228 aa10.09□□□□□ -0.79
GPC6-202ENST00000617456 TMEM67Q5HYA8 995 aa10.09□□□□□ -0.79
GPC6-202ENST00000617456 AXDND1Q5T1B0 1012 aaPredicted RBP10.09□□□□□ -0.79
GPC6-202ENST00000617456 RGS22Q8NE09 1264 aa10.09□□□□□ -0.79
GPC6-202ENST00000617456 ARNTL2Q8WYA1 636 aa10.09□□□□□ -0.79
GPC6-202ENST00000617456 TRERF1Q96PN7 1200 aa10.09□□□□□ -0.79
GPC6-202ENST00000617456 ALDH8A1Q9H2A2 487 aaPredicted RBP10.09□□□□□ -0.79
GPC6-202ENST00000617456 TRMT13Q9NUP7 481 aaKnown RBP10.09□□□□□ -0.79
GPC6-202ENST00000617456 MTMR4Q9NYA4 1195 aa10.09□□□□□ -0.79
GPC6-202ENST00000617456 MTCH2Q9Y6C9 303 aa10.09□□□□□ -0.79
GPC6-202ENST00000617456 SALL3Q9BXA9 1300 aa10.08□□□□□ -0.8
GPC6-202ENST00000617456 PDE4BQ07343 736 aa10.08□□□□□ -0.8
GPC6-202ENST00000617456 ZMYM1Q5SVZ6 1142 aa10.08□□□□□ -0.8
GPC6-202ENST00000617456 IQSEC1Q6DN90 963 aa10.08□□□□□ -0.8
GPC6-202ENST00000617456 TAPT1Q6NXT6 567 aa10.08□□□□□ -0.8
GPC6-202ENST00000617456 KIAA1211Q6ZU35 1233 aa10.08□□□□□ -0.8
GPC6-202ENST00000617456 IFNL3Q8IZI9 196 aa10.08□□□□□ -0.8
GPC6-202ENST00000617456 GMCL1P1Q8NEA9 526 aa10.08□□□□□ -0.8
GPC6-202ENST00000617456 PPP1R13LQ8WUF5 828 aa10.08□□□□□ -0.8
GPC6-202ENST00000617456 EVI5LQ96CN4 794 aa10.08□□□□□ -0.8
GPC6-202ENST00000617456 VWCEQ96DN2 955 aa10.08□□□□□ -0.8
GPC6-202ENST00000617456 PURBQ96QR8 312 aaKnown RBP10.08□□□□□ -0.8
GPC6-202ENST00000617456 LRFN3Q9BTN0 628 aa10.08□□□□□ -0.8
GPC6-202ENST00000617456 EPB41L4AQ9HCS5 686 aaPredicted RBP10.08□□□□□ -0.8
GPC6-202ENST00000617456 MTMR7Q9Y216 660 aa10.08□□□□□ -0.8
GPC6-202ENST00000617456 HCN4Q9Y3Q4 1203 aa10.08□□□□□ -0.8
GPC6-202ENST00000617456 ZNF536O15090 1300 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 GREB1LQ9C091 1923 aaPredicted RBP10.07□□□□□ -0.8
GPC6-202ENST00000617456 REV3LO60673 3130 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 FAM86C2PA6NEL3 165 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 ARHGEF15O94989 841 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 MYL3P08590 195 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 TSPY3P0CV98 308 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 TSPY8P0CW00 308 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 ACTN1P12814 892 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 SLC1A4P43007 532 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 STAT2P52630 851 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 TKFCQ3LXA3 575 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 MUM1L1Q5H9M0 696 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 FAM47CQ5HY64 1035 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 TMEM31Q5JXX7 168 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 UTP14CQ5TAP6 766 aaKnown RBP10.07□□□□□ -0.8
GPC6-202ENST00000617456 NSMFQ6X4W1 530 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 KCTD1Q719H9 257 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 FAM160B2Q86V87 743 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 CHURC1Q8WUH1 139 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 STAG1Q8WVM7 1258 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 SEZ6LQ9BYH1 1024 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 FTOQ9C0B1 505 aaKnown RBP eCLIP10.07□□□□□ -0.8
GPC6-202ENST00000617456 HELLSQ9NRZ9 838 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 PIEZO1Q92508 2521 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 MYH4Q9Y623 1939 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms