RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 CRKP46108 304 aa4.34□□□□□ -1.71
HMGB1P24-202ENST00000615653 RGL3Q3MIN7 710 aa4.34□□□□□ -1.71
HMGB1P24-202ENST00000615653 SEZ6Q53EL9 994 aa4.34□□□□□ -1.71
HMGB1P24-202ENST00000615653 ARSHQ5FYA8 562 aa4.34□□□□□ -1.71
HMGB1P24-202ENST00000615653 OVOS1Q6IE37 1185 aa4.34□□□□□ -1.71
HMGB1P24-202ENST00000615653 PALM2Q8IXS6 379 aa4.34□□□□□ -1.71
HMGB1P24-202ENST00000615653 RNF34Q969K3 372 aa4.34□□□□□ -1.71
HMGB1P24-202ENST00000615653 NOX5Q96PH1 765 aa4.34□□□□□ -1.71
HMGB1P24-202ENST00000615653 KIF2CQ99661 725 aa4.34□□□□□ -1.71
HMGB1P24-202ENST00000615653 BACH2Q9BYV9 841 aa4.34□□□□□ -1.71
HMGB1P24-202ENST00000615653 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.34□□□□□ -1.71
HMGB1P24-202ENST00000615653 IKZF4Q9H2S9 585 aa4.34□□□□□ -1.71
HMGB1P24-202ENST00000615653 CNNM2Q9H8M5 875 aa4.34□□□□□ -1.71
HMGB1P24-202ENST00000615653 UBP1Q9NZI7 540 aa4.34□□□□□ -1.71
HMGB1P24-202ENST00000615653 PPP4R1LQ9P1A2 415 aa4.34□□□□□ -1.71
HMGB1P24-202ENST00000615653 TESMINQ9Y4I5 508 aa4.34□□□□□ -1.71
HMGB1P24-202ENST00000615653 NPIPB8E9PQR5 432 aa4.33□□□□□ -1.72
HMGB1P24-202ENST00000615653 ENDOUP21128 410 aaKnown RBP4.33□□□□□ -1.72
HMGB1P24-202ENST00000615653 DPTQ07507 201 aa4.33□□□□□ -1.72
HMGB1P24-202ENST00000615653 COL9A2Q14055 689 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P24-202ENST00000615653 BORAQ6PGQ7 559 aa4.33□□□□□ -1.72
HMGB1P24-202ENST00000615653 NLRC3Q7RTR2 1065 aa4.33□□□□□ -1.72
HMGB1P24-202ENST00000615653 DNAJC10Q8IXB1 793 aa4.33□□□□□ -1.72
HMGB1P24-202ENST00000615653 AMER2Q8N7J2 671 aa4.33□□□□□ -1.72
HMGB1P24-202ENST00000615653 VOPP1Q96AW1 172 aa4.33□□□□□ -1.72
HMGB1P24-202ENST00000615653 SPATA32Q96LK8 384 aa4.33□□□□□ -1.72
HMGB1P24-202ENST00000615653 JMJD8Q96S16 334 aa4.33□□□□□ -1.72
HMGB1P24-202ENST00000615653 ZNF341Q9BYN7 854 aa4.33□□□□□ -1.72
HMGB1P24-202ENST00000615653 TTBK1Q5TCY1 1321 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P24-202ENST00000615653 TNFRSF10CO14798 259 aa4.32□□□□□ -1.72
HMGB1P24-202ENST00000615653 UBOX5O94941 541 aa4.32□□□□□ -1.72
HMGB1P24-202ENST00000615653 MCM4P33991 863 aa4.32□□□□□ -1.72
HMGB1P24-202ENST00000615653 PRR5P85299 388 aa4.32□□□□□ -1.72
HMGB1P24-202ENST00000615653 SPDYAQ5MJ70 313 aa4.32□□□□□ -1.72
HMGB1P24-202ENST00000615653 ZNF585AQ6P3V2 769 aa4.32□□□□□ -1.72
HMGB1P24-202ENST00000615653 GK5Q6ZS86 529 aa4.32□□□□□ -1.72
HMGB1P24-202ENST00000615653 TMC3Q7Z5M5 1100 aa4.32□□□□□ -1.72
HMGB1P24-202ENST00000615653 SCUBE1Q8IWY4 988 aa4.32□□□□□ -1.72
HMGB1P24-202ENST00000615653 ATG4CQ96DT6 458 aa4.32□□□□□ -1.72
HMGB1P24-202ENST00000615653 SEMA4AQ9H3S1 761 aa4.32□□□□□ -1.72
HMGB1P24-202ENST00000615653 ZNRF3Q9ULT6 936 aa4.32□□□□□ -1.72
HMGB1P24-202ENST00000615653 MROH6A6NGR9 719 aa4.31□□□□□ -1.72
HMGB1P24-202ENST00000615653 LAMTOR5O43504 91 aa4.31□□□□□ -1.72
HMGB1P24-202ENST00000615653 CLEC3AO75596 197 aa4.31□□□□□ -1.72
HMGB1P24-202ENST00000615653 NME1P15531 152 aaKnown RBP4.31□□□□□ -1.72
HMGB1P24-202ENST00000615653 SELENOPP49908 381 aa4.31□□□□□ -1.72
HMGB1P24-202ENST00000615653 CLCQ05315 142 aa4.31□□□□□ -1.72
HMGB1P24-202ENST00000615653 SURF1Q15526 300 aa4.31□□□□□ -1.72
HMGB1P24-202ENST00000615653 CSRP2Q16527 193 aa4.31□□□□□ -1.72
HMGB1P24-202ENST00000615653 FAM26FQ5R3K3 315 aa4.31□□□□□ -1.72
HMGB1P24-202ENST00000615653 FAM124AQ86V42 546 aa4.31□□□□□ -1.72
HMGB1P24-202ENST00000615653 TAB3Q8N5C8 712 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P24-202ENST00000615653 TMEM52Q8NDY8 209 aa4.31□□□□□ -1.72
HMGB1P24-202ENST00000615653 DEF6Q9H4E7 631 aa4.31□□□□□ -1.72
HMGB1P24-202ENST00000615653 PRR13Q9NZ81 148 aa4.31□□□□□ -1.72
HMGB1P24-202ENST00000615653 KRTAP29-1A8MX34 341 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P24-202ENST00000615653 GPR42O15529 346 aa4.3□□□□□ -1.72
HMGB1P24-202ENST00000615653 PPFIA2O75334 1257 aa4.3□□□□□ -1.72
HMGB1P24-202ENST00000615653 RGS19P49795 217 aa4.3□□□□□ -1.72
HMGB1P24-202ENST00000615653 ZNF394Q53GI3 561 aa4.3□□□□□ -1.72
HMGB1P24-202ENST00000615653 NBPF12Q5TAG4 269 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P24-202ENST00000615653 INTS3Q68E01 1043 aaKnown RBP4.3□□□□□ -1.72
HMGB1P24-202ENST00000615653 ZNF654Q8IZM8 581 aa4.3□□□□□ -1.72
HMGB1P24-202ENST00000615653 LINC00482Q8N8I6 264 aa4.3□□□□□ -1.72
HMGB1P24-202ENST00000615653 RBBP8NLQ8NC74 664 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P24-202ENST00000615653 SMARCC1Q92922 1105 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P24-202ENST00000615653 DDX41Q9UJV9 622 aaKnown RBP4.3□□□□□ -1.72
HMGB1P24-202ENST00000615653 F8W031 263 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P24-202ENST00000615653 MUSKO15146 869 aa4.29□□□□□ -1.72
HMGB1P24-202ENST00000615653 ABHD18Q0P651 414 aa4.29□□□□□ -1.72
HMGB1P24-202ENST00000615653 TRIM26Q12899 539 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P24-202ENST00000615653 FOXE3Q13461 319 aa4.29□□□□□ -1.72
HMGB1P24-202ENST00000615653 NBPF9Q3BBW0 867 aa4.29□□□□□ -1.72
HMGB1P24-202ENST00000615653 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
HMGB1P24-202ENST00000615653 SMARCC2Q8TAQ2 1214 aa4.29□□□□□ -1.72
HMGB1P24-202ENST00000615653 CPA5Q8WXQ8 436 aa4.29□□□□□ -1.72
HMGB1P24-202ENST00000615653 MRRFQ96E11 262 aaKnown RBP4.29□□□□□ -1.72
HMGB1P24-202ENST00000615653 DHRS1Q96LJ7 313 aa4.29□□□□□ -1.72
HMGB1P24-202ENST00000615653 WWC2-AS2Q96NR7 200 aa4.29□□□□□ -1.72
HMGB1P24-202ENST00000615653 FERD3LQ96RJ6 166 aa4.29□□□□□ -1.72
HMGB1P24-202ENST00000615653 TM9SF2Q99805 663 aa4.29□□□□□ -1.72
HMGB1P24-202ENST00000615653 TCAF1Q9Y4C2 921 aa4.29□□□□□ -1.72
HMGB1P24-202ENST00000615653 PCDHGB7Q9Y5F8 929 aa4.29□□□□□ -1.72
HMGB1P24-202ENST00000615653 NPEPPSL1A6NEC2 478 aa4.28□□□□□ -1.72
HMGB1P24-202ENST00000615653 SIGLEC6O43699 453 aa4.28□□□□□ -1.72
HMGB1P24-202ENST00000615653 ZNF205O95201 554 aa4.28□□□□□ -1.72
HMGB1P24-202ENST00000615653 PRAMEF1O95521 474 aa4.28□□□□□ -1.72
HMGB1P24-202ENST00000615653 RPL13P26373 211 aaKnown RBP4.28□□□□□ -1.72
HMGB1P24-202ENST00000615653 POLR2BP30876 1174 aaKnown RBP4.28□□□□□ -1.72
HMGB1P24-202ENST00000615653 SNW1Q13573 536 aaKnown RBP4.28□□□□□ -1.72
HMGB1P24-202ENST00000615653 MIIPQ5JXC2 388 aa4.28□□□□□ -1.72
HMGB1P24-202ENST00000615653 METTL16Q86W50 562 aaKnown RBP4.28□□□□□ -1.72
HMGB1P24-202ENST00000615653 RASGRP4Q8TDF6 673 aa4.28□□□□□ -1.72
HMGB1P24-202ENST00000615653 ALG3Q92685 438 aa4.28□□□□□ -1.72
HMGB1P24-202ENST00000615653 ZBTB8AQ96BR9 441 aa4.28□□□□□ -1.72
HMGB1P24-202ENST00000615653 SLC6A18Q96N87 628 aa4.28□□□□□ -1.72
HMGB1P24-202ENST00000615653 MKRN2Q9H000 416 aaKnown RBP4.28□□□□□ -1.72
HMGB1P24-202ENST00000615653 SUCOQ9UBS9 1254 aaKnown RBP4.28□□□□□ -1.72
HMGB1P24-202ENST00000615653 CCDC9Q9Y3X0 531 aaKnown RBP4.28□□□□□ -1.72
HMGB1P24-202ENST00000615653 PCDHB12Q9Y5F1 795 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms