RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 XRCC4Q13426 336 aa11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 PDIA6Q15084 440 aa11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 TAF11Q15544 211 aa11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 ENOX2Q16206 610 aaKnown RBP11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 CCDC178Q5BJE1 867 aa11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 MB21D1Q8N884 522 aa11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 AGAP11Q8TF27 550 aa11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 CAVIN3Q969G5 261 aa11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 TSGA10Q9BZW7 698 aa11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 IFIT3O14879 490 aaKnown RBP11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 MGRN1O60291 552 aa11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 MTIF2P46199 727 aaKnown RBP11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 GCKRQ14397 625 aa11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 MIS18BP1Q6P0N0 1132 aa11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 APOA5Q6Q788 366 aa11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 RUFY4Q6ZNE9 571 aa11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 ZNF513Q8N8E2 541 aaPredicted RBP11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 RAPGEF5Q92565 580 aa11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 OSBPL1AQ9BXW6 950 aa11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 PAPOLBQ9NRJ5 636 aaKnown RBP11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 LIMA1Q9UHB6 759 aaKnown RBP11.45□□□□□ -0.58
TNFAIP3-208ENST00000615468 MAGOHP61326 146 aaKnown RBP11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 TRADDQ15628 312 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 C2CD5Q86YS7 1000 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 MB21D2Q8IYB1 491 aaPredicted RBP11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 WASF1Q92558 559 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 MAGOHBQ96A72 148 aaKnown RBP11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 SENP2Q9HC62 589 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 HOMER3Q9NSC5 361 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 SAMD15Q9P1V8 674 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 LTN1O94822 1766 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 CTCFP49711 727 aaPredicted RBP11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 PAPOLAP51003 745 aaKnown RBP11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 PTPN12Q05209 780 aaKnown RBP11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 LAMB3Q13751 1172 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 PDCD2Q16342 344 aaPredicted RBP11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 PROCA1Q8NCQ7 364 aaPredicted RBP11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 MDM1Q8TC05 714 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 PIK3R5Q8WYR1 880 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 FAM89AQ96GI7 184 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 PANK4Q9NVE7 773 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 GGA2Q9UJY4 613 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 GDAQ9Y2T3 454 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 SRPRBQ9Y5M8 271 aaKnown RBP11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 KDM6AO15550 1401 aaPredicted RBP11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 PDHA1P08559 390 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 PRPHP41219 470 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 MAGEA1P43355 309 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 TOB1P50616 345 aaPredicted RBP11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 ZNF174Q15697 407 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 TDRD12Q587J7 1177 aaKnown RBP11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 WDR59Q6PJI9 974 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 SYNE4Q8N205 404 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 PAGR1Q9BTK6 254 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 METTL22Q9BUU2 404 aaPredicted RBP11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 RGPD2P0DJD1 1756 aa11.44□□□□□ -0.58
TNFAIP3-208ENST00000615468 LRRD1A4D1F6 860 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 CCT8L1PA6NM43 557 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 NBPF26B4DH59 902 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 TRAPPC3O43617 180 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 POLE2P56282 527 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 PPP2R2AP63151 447 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 NBPF15Q8N660 670 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 CNKSR2Q8WXI2 1034 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 C8orf37Q96NL8 207 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 ELAC2Q9BQ52 826 aaKnown RBP11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 CD2APQ9Y5K6 639 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 PYGLP06737 847 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 PLEKP08567 350 aaPredicted RBP11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 GUCY1A2P33402 732 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 KLK7P49862 253 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 PTPROQ16827 1216 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 CDCA2Q69YH5 1023 aaPredicted RBP11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 SMIM5Q71RC9 77 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 PRCCQ92733 491 aaPredicted RBP11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 COPRSQ9NQ92 184 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 SWAP70Q9UH65 585 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 NCAPD2Q15021 1401 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 RAB27AP51159 221 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 TAF1DQ9H5J8 278 aaPredicted RBP11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 UBN2Q6ZU65 1347 aa11.43□□□□□ -0.58
TNFAIP3-208ENST00000615468 A0A087X0B3 334 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 IFNAR2P48551 515 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 MAP3K12Q12852 859 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 KIF2BQ8N4N8 673 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 CCHCR1Q8TD31 782 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 OXER1Q8TDS5 423 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 DYDC1Q8WWB3 177 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 GOPCQ9HD26 462 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 CAPN11Q9UMQ6 739 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 hCG_1642624A0A1W2PR95 340 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 ERICH2A1L162 156 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 UBAP1LF5GYI3 381 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 FECHP22830 423 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 LACTBP83111 547 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 SLMAPQ14BN4 828 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 CDC37Q16543 378 aaPredicted RBP11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 WHAMMQ8TF30 809 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 CASKIN2Q8WXE0 1202 aa11.42□□□□□ -0.58
TNFAIP3-208ENST00000615468 PIGBQ92521 554 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms