RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 FAM160B2Q86V87 743 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 CDHR1Q96JP9 859 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 BRIP1Q9BX63 1249 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 HAUS2Q9NVX0 235 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 MAN1B1Q9UKM7 699 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 RIMS1Q86UR5 1692 aaKnown RBP16.2■□□□□ 0.18
SNPH-203ENST00000614659 CEP104O60308 925 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 EXOC3O60645 756 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 FERP16591 822 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 DPCR1Q3MIW9 517 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 ARL6IP4Q66PJ3 421 aaKnown RBP16.2■□□□□ 0.18
SNPH-203ENST00000614659 DAAM2Q86T65 1068 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 ZNF579Q8NAF0 562 aaKnown RBP16.2■□□□□ 0.18
SNPH-203ENST00000614659 EPN1Q9Y6I3 576 aaPredicted RBP16.2■□□□□ 0.18
SNPH-203ENST00000614659 A0A1B0GUA9 196 aa16.19■□□□□ 0.18
SNPH-203ENST00000614659 TTLL1O95922 423 aa16.19■□□□□ 0.18
SNPH-203ENST00000614659 PLCB3Q01970 1234 aa16.19■□□□□ 0.18
SNPH-203ENST00000614659 PANX2Q96RD6 677 aa16.19■□□□□ 0.18
SNPH-203ENST00000614659 PANK4Q9NVE7 773 aa16.19■□□□□ 0.18
SNPH-203ENST00000614659 FEZ2Q9UHY8 353 aaPredicted RBP16.19■□□□□ 0.18
SNPH-203ENST00000614659 CCPG1Q9ULG6 757 aa16.19■□□□□ 0.18
SNPH-203ENST00000614659 hCG_1642624A0A1W2PR95 340 aa16.19■□□□□ 0.18
SNPH-203ENST00000614659 GBP1P32455 592 aa16.19■□□□□ 0.18
SNPH-203ENST00000614659 SRGAP1Q7Z6B7 1085 aa16.19■□□□□ 0.18
SNPH-203ENST00000614659 RIC8AQ9NPQ8 531 aa16.19■□□□□ 0.18
SNPH-203ENST00000614659 RAD17O75943 681 aa16.19■□□□□ 0.18
SNPH-203ENST00000614659 SUSD4Q5VX71 490 aa16.19■□□□□ 0.18
SNPH-203ENST00000614659 SLC17A8Q8NDX2 589 aa16.19■□□□□ 0.18
SNPH-203ENST00000614659 TRIM7Q9C029 511 aa16.19■□□□□ 0.18
SNPH-203ENST00000614659 PUS7LQ9H0K6 701 aaKnown RBP16.19■□□□□ 0.18
SNPH-203ENST00000614659 THAP9Q9H5L6 903 aa16.19■□□□□ 0.18
SNPH-203ENST00000614659 CTTNBP2NLQ9P2B4 639 aa16.19■□□□□ 0.18
SNPH-203ENST00000614659 DDX25Q9UHL0 483 aaKnown RBP16.19■□□□□ 0.18
SNPH-203ENST00000614659 AMFRQ9UKV5 643 aa16.19■□□□□ 0.18
SNPH-203ENST00000614659 SPOUT1Q5T280 376 aaKnown RBP16.19■□□□□ 0.18
SNPH-203ENST00000614659 FAM207AQ9NSI2 230 aaPredicted RBP16.19■□□□□ 0.18
SNPH-203ENST00000614659 NDUFAB1O14561 156 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 IGKV5-2P06315 115 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 FAM47CQ5HY64 1035 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 FAM71BQ8TC56 605 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 STAG1Q8WVM7 1258 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 AMNQ9BXJ7 453 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 PCDHA12Q9UN75 941 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 C21orf2O43822 256 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 TECP42680 631 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 EN1Q05925 392 aaPredicted RBP16.18■□□□□ 0.18
SNPH-203ENST00000614659 CCDC14Q49A88 953 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.18■□□□□ 0.18
SNPH-203ENST00000614659 STAMQ92783 540 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 SMC6Q96SB8 1091 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 FAM184BQ9ULE4 1060 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 SOS2Q07890 1332 aaPredicted RBP16.18■□□□□ 0.18
SNPH-203ENST00000614659 CLRN2A0PK11 232 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 RESP18Q5W5W9 173 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 SPTLC3Q9NUV7 552 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 COL4A3BPQ9Y5P4 624 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 ZBTB24O43167 697 aaPredicted RBP16.18■□□□□ 0.18
SNPH-203ENST00000614659 HOXD10P28358 340 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 ABCD1P33897 745 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 GJC1P36383 396 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 STAT1P42224 750 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 LACTBP83111 547 aaPredicted RBP16.18■□□□□ 0.18
SNPH-203ENST00000614659 ERCC6LQ2NKX8 1250 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 ZNF365Q70YC5 407 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 RUNDC3BQ96NL0 473 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 SERPINB13Q9UIV8 391 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 SEMA3FQ13275 785 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 SND1Q7KZF4 910 aaKnown RBP eCLIP16.18■□□□□ 0.18
SNPH-203ENST00000614659 TEKT3Q9BXF9 490 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 RNF181Q9P0P0 153 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 ARMCX3Q9UH62 379 aaPredicted RBP16.18■□□□□ 0.18
SNPH-203ENST00000614659 TRPC6Q9Y210 931 aa16.18■□□□□ 0.18
SNPH-203ENST00000614659 TLDC2A0PJX2 215 aa16.17■□□□□ 0.18
SNPH-203ENST00000614659 ALX1Q15699 326 aa16.17■□□□□ 0.18
SNPH-203ENST00000614659 NELFCDQ8IXH7 590 aa16.17■□□□□ 0.18
SNPH-203ENST00000614659 MAK16Q9BXY0 300 aaKnown RBP16.17■□□□□ 0.18
SNPH-203ENST00000614659 TMEM232C9JQI7 657 aa16.17■□□□□ 0.18
SNPH-203ENST00000614659 ZBTB7AO95365 584 aa16.17■□□□□ 0.18
SNPH-203ENST00000614659 NAA25Q14CX7 972 aa16.17■□□□□ 0.18
SNPH-203ENST00000614659 CACTINQ8WUQ7 758 aaKnown RBP16.17■□□□□ 0.18
SNPH-203ENST00000614659 CHAMP1Q96JM3 812 aa16.17■□□□□ 0.18
SNPH-203ENST00000614659 PDLIM2Q96JY6 352 aa16.17■□□□□ 0.18
SNPH-203ENST00000614659 CYP19A1P11511 503 aaPredicted RBP16.17■□□□□ 0.18
SNPH-203ENST00000614659 FAM26FQ5R3K3 315 aa16.17■□□□□ 0.18
SNPH-203ENST00000614659 CCDC25Q86WR0 208 aa16.17■□□□□ 0.18
SNPH-203ENST00000614659 PSMD2Q13200 908 aa16.17■□□□□ 0.18
SNPH-203ENST00000614659 CMTR1Q8N1G2 835 aaKnown RBP16.17■□□□□ 0.18
SNPH-203ENST00000614659 DEPTORQ8TB45 409 aa16.17■□□□□ 0.18
SNPH-203ENST00000614659 ARHGEF1Q92888 912 aaKnown RBP16.17■□□□□ 0.18
SNPH-203ENST00000614659 ZNF341Q9BYN7 854 aa16.17■□□□□ 0.18
SNPH-203ENST00000614659 KCNK9Q9NPC2 374 aa16.17■□□□□ 0.18
SNPH-203ENST00000614659 PIK3C2BO00750 1634 aa16.16■□□□□ 0.18
SNPH-203ENST00000614659 TESPA1A2RU30 521 aaPredicted RBP16.16■□□□□ 0.18
SNPH-203ENST00000614659 DTNBO60941 627 aa16.16■□□□□ 0.18
SNPH-203ENST00000614659 ADPGKQ9BRR6 497 aa16.16■□□□□ 0.18
SNPH-203ENST00000614659 RNF14Q9UBS8 474 aa16.16■□□□□ 0.18
SNPH-203ENST00000614659 CYP2E1P05181 493 aaPredicted RBP16.16■□□□□ 0.18
SNPH-203ENST00000614659 TFDP1Q14186 410 aa16.16■□□□□ 0.18
SNPH-203ENST00000614659 SP8Q8IXZ3 490 aa16.16■□□□□ 0.18
SNPH-203ENST00000614659 P2RX5Q93086 422 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms