RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 ENC1O14682 589 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 MCM7P33993 719 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 CLK2P49760 499 aaKnown RBP12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 PDIA5Q14554 519 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 GOLGA1Q92805 767 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 ABCB6Q9NP58 842 aa12.16□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 CCT6AP40227 531 aaKnown RBP12.15□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 TUBB2AQ13885 445 aa12.15□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 NONOQ15233 471 aaKnown RBP eCLIP12.15□□□□□ -0.461e-8■■■■■ 39.3
SENP3-EIF4A1-201ENST00000614237 ZNF662Q6ZS27 426 aa12.15□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 MKL1Q969V6 931 aa12.15□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 DHTKD1Q96HY7 919 aaPredicted RBP12.15□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 TUBB2BQ9BVA1 445 aa12.15□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 MAPK8IP1Q9UQF2 711 aa12.15□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 AKR1B15C9JRZ8 316 aaPredicted RBP12.15□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 TULP2O00295 520 aa12.15□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 PDHBP11177 359 aa12.15□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 EEF1GP26641 437 aaKnown RBP12.15□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 PAK1Q13153 545 aa12.15□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 FILIP1LQ4L180 1135 aa12.15□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 CEP95Q96GE4 821 aa12.15□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 FAM107BQ9H098 131 aa12.15□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 MYH4Q9Y623 1939 aa12.15□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 EFCAB8A8MWE9 144 aa12.15□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 PPP4R3AQ6IN85 833 aa12.15□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 KRT27Q7Z3Y8 459 aa12.15□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 IQCDQ96DY2 449 aa12.15□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 GLT8D2Q9H1C3 349 aa12.15□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ABCB11O95342 1321 aa12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ZRANB2O95218 330 aaKnown RBP eCLIP12.14□□□□□ -0.474e-8■■■■□ 21.7
SENP3-EIF4A1-201ENST00000614237 ABL1P00519 1130 aa12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 PDE6BP35913 854 aa12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 RASGRP2Q7LDG7 609 aa12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 CNGA4Q8IV77 575 aa12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 NAP1L4Q99733 375 aaKnown RBP12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 CENPHQ9H3R5 247 aa12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 MRPL44Q9H9J2 332 aaKnown RBP12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 OR52Z1P0C646 297 aa12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 TCP11X2Q5H9J9 407 aa12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 MEX3CQ5U5Q3 659 aaKnown RBP12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 NEK8Q86SG6 692 aa12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 SRLQ86TD4 932 aa12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ACRBPQ8NEB7 543 aa12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 CCDC17Q96LX7 622 aa12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 PSMB7Q99436 277 aa12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 MNAT1P51948 309 aa12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 RRAGBQ5VZM2 374 aa12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 NCAPH2Q6IBW4 605 aa12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 SLC44A5Q8NCS7 719 aa12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 GPKOWQ92917 476 aaPredicted RBP eCLIP12.14□□□□□ -0.478e-6■■■□□ 18.6
SENP3-EIF4A1-201ENST00000614237 PNKPQ96T60 521 aa12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 TMEM60Q9H2L4 133 aa12.14□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 FAM170AA1A519 330 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 MFAP3LO75121 409 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 CDC25AP30304 524 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ACTN2P35609 894 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 STAT6P42226 847 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 TUBB4BP68371 445 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 TXNRD1Q16881 649 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 MCTP2Q6DN12 878 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 PODNQ7Z5L7 613 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ZDHHC15Q96MV8 337 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 RIC8AQ9NPQ8 531 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 STK17AQ9UEE5 414 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 GUCA1BQ9UMX6 200 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ADAMTSL1Q8N6G6 1762 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 SMCO2A6NFE2 343 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 TTLL1O95922 423 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 HYIQ5T013 277 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 FAM182BQ5T319 152 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 GPATCH4Q5T3I0 446 aaKnown RBP12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 PACS2Q86VP3 889 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ZNF507Q8TCN5 953 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 IDI2Q9BXS1 227 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 FUT8Q9BYC5 575 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 DEF6Q9H4E7 631 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 QTRT2Q9H974 415 aaKnown RBP12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 SEC63Q9UGP8 760 aaKnown RBP12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ATAD5Q96QE3 1844 aa12.13□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 HEATR3Q7Z4Q2 680 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 SLC51AQ86UW1 340 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 PPFIBP1Q86W92 1011 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 CERS5Q8N5B7 392 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 MASTLQ96GX5 879 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 TSPYL1Q9H0U9 437 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 FAM204AQ9H8W3 233 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 JRKLQ9Y4A0 524 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 PNMA6FA0A0J9YX94 578 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 PVALEFA0A1B0GWK0 134 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 EIF3CLB5ME19 914 aaKnown RBP12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 TEX33O43247 280 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 EDIL3O43854 480 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ECM2O94769 699 aaPredicted RBP12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 TPM1P09493 284 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ERCC3P19447 782 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 MAP3K9P80192 1104 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ZNF543Q08ER8 600 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 KRT31Q15323 416 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 STYK1Q6J9G0 422 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 IRF2BP1Q8IU81 584 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms