RNA–Protein interactions for RNA: ENST00000614056.4

PDCD2-215, Transcript of programmed cell death 2, human

TSL 2 BASIC

Gene PDCD2, Length 1,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD2-215	ENST00000614056	ZNF543	Q08ER8	600 aa		32.31	■■■□□ 2.76
PDCD2-215	ENST00000614056	GRIN2C	Q14957	1233 aa		32.31	■■■□□ 2.76
PDCD2-215	ENST00000614056	TRPV6	Q9H1D0	765 aa		32.31	■■■□□ 2.76
PDCD2-215	ENST00000614056	HIPK3	Q9H422	1215 aa		32.31	■■■□□ 2.76
PDCD2-215	ENST00000614056		Q9Y3F1	56 aa		32.31	■■■□□ 2.76
PDCD2-215	ENST00000614056	NEDD4	P46934	1319 aa		32.3	■■■□□ 2.76
PDCD2-215	ENST00000614056	PSRC1	Q6PGN9	363 aa	Predicted RBP	32.3	■■■□□ 2.76
PDCD2-215	ENST00000614056	CLEC4D	Q8WXI8	215 aa		32.3	■■■□□ 2.76
PDCD2-215	ENST00000614056	TIFA	Q96CG3	184 aa		32.3	■■■□□ 2.76
PDCD2-215	ENST00000614056	RWDD1	Q9H446	243 aa	Predicted RBP	32.3	■■■□□ 2.76
PDCD2-215	ENST00000614056	PBX2	P40425	430 aa		32.29	■■■□□ 2.76
PDCD2-215	ENST00000614056	MFAP1	P55081	439 aa	Known RBP	32.29	■■■□□ 2.76
PDCD2-215	ENST00000614056	DUSP28	Q4G0W2	176 aa		32.29	■■■□□ 2.76
PDCD2-215	ENST00000614056	RNF207	Q6ZRF8	634 aa		32.29	■■■□□ 2.76
PDCD2-215	ENST00000614056	SMC5	Q8IY18	1101 aa		32.29	■■■□□ 2.76
PDCD2-215	ENST00000614056	TTC14	Q96N46	770 aa		32.29	■■■□□ 2.76
PDCD2-215	ENST00000614056	WDR11	Q9BZH6	1224 aa		32.29	■■■□□ 2.76
PDCD2-215	ENST00000614056	IL23A	Q9NPF7	189 aa		32.29	■■■□□ 2.76
PDCD2-215	ENST00000614056	LAMA4	Q16363	1823 aa		32.28	■■■□□ 2.76
PDCD2-215	ENST00000614056	GOLGA8H	P0CJ92	632 aa		32.28	■■■□□ 2.76
PDCD2-215	ENST00000614056	PC	P11498	1178 aa	Known RBP	32.28	■■■□□ 2.76
PDCD2-215	ENST00000614056	RNF41	Q9H4P4	317 aa	Predicted RBP	32.28	■■■□□ 2.76
PDCD2-215	ENST00000614056	ZNF576	Q9H609	170 aa		32.28	■■■□□ 2.76
PDCD2-215	ENST00000614056	B4GALT4	O60513	344 aa		32.27	■■■□□ 2.76
PDCD2-215	ENST00000614056	CCL23	P55773	120 aa		32.27	■■■□□ 2.76
PDCD2-215	ENST00000614056	RASIP1	Q5U651	963 aa		32.27	■■■□□ 2.76
PDCD2-215	ENST00000614056	CHD1L	Q86WJ1	897 aa		32.27	■■■□□ 2.76
PDCD2-215	ENST00000614056	PLEKHM2	Q8IWE5	1019 aa		32.27	■■■□□ 2.76
PDCD2-215	ENST00000614056	ESR2	Q92731	530 aa		32.27	■■■□□ 2.76
PDCD2-215	ENST00000614056	PBX4	Q9BYU1	374 aa		32.27	■■■□□ 2.76
PDCD2-215	ENST00000614056	CPVL	Q9H3G5	476 aa		32.27	■■■□□ 2.76
PDCD2-215	ENST00000614056	ZNF213	O14771	459 aa		32.26	■■■□□ 2.75
PDCD2-215	ENST00000614056	SNHG28	P0DPA3	235 aa		32.26	■■■□□ 2.75
PDCD2-215	ENST00000614056	USH1G	Q495M9	461 aa		32.26	■■■□□ 2.75
PDCD2-215	ENST00000614056	CWC27	Q6UX04	472 aa	Known RBP	32.26	■■■□□ 2.75
PDCD2-215	ENST00000614056	IGHD	P01880	384 aa		32.25	■■■□□ 2.75
PDCD2-215	ENST00000614056	MYL3	P08590	195 aa		32.25	■■■□□ 2.75
PDCD2-215	ENST00000614056	RPS6	P62753	249 aa	Known RBP	32.25	■■■□□ 2.75
PDCD2-215	ENST00000614056	PDE4D	Q08499	809 aa		32.25	■■■□□ 2.75
PDCD2-215	ENST00000614056	NOC4L	Q9BVI4	516 aa	Known RBP	32.25	■■■□□ 2.75
PDCD2-215	ENST00000614056	PRUNE2	Q8WUY3	3088 aa		32.24	■■■□□ 2.75
PDCD2-215	ENST00000614056	AAMP	Q13685	434 aa		32.24	■■■□□ 2.75
PDCD2-215	ENST00000614056	OR6J1	Q8NGC5	347 aa		32.24	■■■□□ 2.75
PDCD2-215	ENST00000614056	UBA5	Q9GZZ9	404 aa		32.24	■■■□□ 2.75
PDCD2-215	ENST00000614056	DIAPH3	Q9NSV4	1193 aa		32.24	■■■□□ 2.75
PDCD2-215	ENST00000614056	CXXC1	Q9P0U4	656 aa	Predicted RBP	32.24	■■■□□ 2.75
PDCD2-215	ENST00000614056	PNMA2	Q9UL42	364 aa		32.24	■■■□□ 2.75
PDCD2-215	ENST00000614056	GBF1	Q92538	1859 aa		32.24	■■■□□ 2.75
PDCD2-215	ENST00000614056	WDR19	Q8NEZ3	1342 aa		32.24	■■■□□ 2.75
PDCD2-215	ENST00000614056	LOC102724159	A0A0B4J2E5	919 aa		32.23	■■■□□ 2.75
PDCD2-215	ENST00000614056	FGB	P02675	491 aa		32.23	■■■□□ 2.75
PDCD2-215	ENST00000614056	PWP2	Q15269	919 aa	Known RBP	32.23	■■■□□ 2.75
PDCD2-215	ENST00000614056	SEZ6L	Q9BYH1	1024 aa		32.23	■■■□□ 2.75
PDCD2-215	ENST00000614056	POLR3E	Q9NVU0	708 aa		32.23	■■■□□ 2.75
PDCD2-215	ENST00000614056	KDM4A	O75164	1064 aa		32.22	■■■□□ 2.75
PDCD2-215	ENST00000614056	CPT1A	P50416	773 aa		32.22	■■■□□ 2.75
PDCD2-215	ENST00000614056	NUCB1	Q02818	461 aa		32.22	■■■□□ 2.75
PDCD2-215	ENST00000614056	OTOP2	Q7RTS6	562 aa		32.22	■■■□□ 2.75
PDCD2-215	ENST00000614056	HERVK_113	Q902F9	699 aa		32.22	■■■□□ 2.75
PDCD2-215	ENST00000614056	MPHOSPH6	Q99547	160 aa	Known RBP	32.22	■■■□□ 2.75
PDCD2-215	ENST00000614056	WNT8A	Q9H1J5	351 aa		32.22	■■■□□ 2.75
PDCD2-215	ENST00000614056	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	32.22	■■■□□ 2.75
PDCD2-215	ENST00000614056	RBM47	A0AV96	593 aa	Known RBP	32.21	■■■□□ 2.75
PDCD2-215	ENST00000614056	PPP2R5B	Q15173	497 aa		32.21	■■■□□ 2.75
PDCD2-215	ENST00000614056	GPATCH4	Q5T3I0	446 aa	Known RBP	32.21	■■■□□ 2.75
PDCD2-215	ENST00000614056	OSBPL3	Q9H4L5	887 aa		32.21	■■■□□ 2.75
PDCD2-215	ENST00000614056	TRMT13	Q9NUP7	481 aa	Known RBP	32.21	■■■□□ 2.75
PDCD2-215	ENST00000614056	PURA	Q00577	322 aa	Known RBP	32.2	■■■□□ 2.75
PDCD2-215	ENST00000614056	IQCA1	Q86XH1	822 aa		32.2	■■■□□ 2.75
PDCD2-215	ENST00000614056	DGKH	Q86XP1	1220 aa		32.2	■■■□□ 2.75
PDCD2-215	ENST00000614056	PNMA1	Q8ND90	353 aa		32.2	■■■□□ 2.75
PDCD2-215	ENST00000614056	EXOC6	Q8TAG9	804 aa		32.2	■■■□□ 2.75
PDCD2-215	ENST00000614056	PPP1R13L	Q8WUF5	828 aa		32.2	■■■□□ 2.75
PDCD2-215	ENST00000614056	COPS5	Q92905	334 aa		32.2	■■■□□ 2.75
PDCD2-215	ENST00000614056	SCLY	Q96I15	445 aa		32.2	■■■□□ 2.75
PDCD2-215	ENST00000614056	MTIF3	Q9H2K0	278 aa	Known RBP	32.2	■■■□□ 2.75
PDCD2-215	ENST00000614056	KAT14	Q9H8E8	782 aa		32.2	■■■□□ 2.75
PDCD2-215	ENST00000614056	GPHN	Q9NQX3	736 aa	Predicted RBP	32.2	■■■□□ 2.75
PDCD2-215	ENST00000614056		B4E1Z4	1266 aa		32.19	■■■□□ 2.74
PDCD2-215	ENST00000614056	MSRA	Q9UJ68	235 aa		32.19	■■■□□ 2.74
PDCD2-215	ENST00000614056	CYP2C9	P11712	490 aa		32.18	■■■□□ 2.74
PDCD2-215	ENST00000614056	CDC37	Q16543	378 aa	Predicted RBP	32.18	■■■□□ 2.74
PDCD2-215	ENST00000614056	FAM47C	Q5HY64	1035 aa		32.18	■■■□□ 2.74
PDCD2-215	ENST00000614056	USP38	Q8NB14	1042 aa		32.18	■■■□□ 2.74
PDCD2-215	ENST00000614056	DNER	Q8NFT8	737 aa		32.18	■■■□□ 2.74
PDCD2-215	ENST00000614056	SCFD2	Q8WU76	684 aa		32.18	■■■□□ 2.74
PDCD2-215	ENST00000614056	MTG1	Q9BT17	334 aa	Predicted RBP	32.18	■■■□□ 2.74
PDCD2-215	ENST00000614056	PRDM12	Q9H4Q4	367 aa		32.18	■■■□□ 2.74
PDCD2-215	ENST00000614056	MYH6	P13533	1939 aa		32.18	■■■□□ 2.74
PDCD2-215	ENST00000614056	EDNRB	P24530	442 aa		32.17	■■■□□ 2.74
PDCD2-215	ENST00000614056	GAS2L1	Q99501	681 aa	Predicted RBP	32.17	■■■□□ 2.74
PDCD2-215	ENST00000614056	NKX2-4	Q9H2Z4	354 aa		32.17	■■■□□ 2.74
PDCD2-215	ENST00000614056	TNKS	O95271	1327 aa		32.17	■■■□□ 2.74
PDCD2-215	ENST00000614056	RAD50	Q92878	1312 aa		32.17	■■■□□ 2.74
PDCD2-215	ENST00000614056	TXN	P10599	105 aa	Known RBP	32.16	■■■□□ 2.74
PDCD2-215	ENST00000614056	RAB30	Q15771	203 aa		32.16	■■■□□ 2.74
PDCD2-215	ENST00000614056	BRDT	Q58F21	947 aa	Predicted RBP	32.16	■■■□□ 2.74
PDCD2-215	ENST00000614056	CCDC178	Q5BJE1	867 aa		32.16	■■■□□ 2.74
PDCD2-215	ENST00000614056	TBC1D5	Q92609	795 aa		32.16	■■■□□ 2.74
PDCD2-215	ENST00000614056	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	32.16	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms