RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 MGAMO43451 1857 aa15.29■□□□□ 0.04
MDC1-209ENST00000613547 B4DLN1 442 aa15.28■□□□□ 0.04
MDC1-209ENST00000613547 GCOM1H8Y6P7 765 aaPredicted RBP15.28■□□□□ 0.04
MDC1-209ENST00000613547 INHAP05111 366 aa15.28■□□□□ 0.04
MDC1-209ENST00000613547 POLR2MP0CAP2 368 aa15.28■□□□□ 0.04
MDC1-209ENST00000613547 SCG2P13521 617 aa15.28■□□□□ 0.04
MDC1-209ENST00000613547 MRPL12P52815 198 aaKnown RBP15.28■□□□□ 0.04
MDC1-209ENST00000613547 NAPAP54920 295 aa15.28■□□□□ 0.04
MDC1-209ENST00000613547 RPS6P62753 249 aaKnown RBP15.28■□□□□ 0.04
MDC1-209ENST00000613547 PFKFB3Q16875 520 aaPredicted RBP15.28■□□□□ 0.04
MDC1-209ENST00000613547 SLC30A10Q6XR72 485 aa15.28■□□□□ 0.04
MDC1-209ENST00000613547 FAM133AQ8N9E0 248 aa15.28■□□□□ 0.04
MDC1-209ENST00000613547 DNERQ8NFT8 737 aa15.28■□□□□ 0.04
MDC1-209ENST00000613547 GPKOWQ92917 476 aaPredicted RBP eCLIP15.28■□□□□ 0.04
MDC1-209ENST00000613547 ARMC5Q96C12 935 aa15.28■□□□□ 0.04
MDC1-209ENST00000613547 LOC102724159A0A0B4J2E5 919 aa15.27■□□□□ 0.04
MDC1-209ENST00000613547 ASB14A6NK59 587 aa15.27■□□□□ 0.04
MDC1-209ENST00000613547 DEXIO95424 95 aa15.27■□□□□ 0.04
MDC1-209ENST00000613547 CNTN2Q02246 1040 aa15.27■□□□□ 0.04
MDC1-209ENST00000613547 GHRHRQ02643 423 aa15.27■□□□□ 0.04
MDC1-209ENST00000613547 PWP2Q15269 919 aaKnown RBP15.27■□□□□ 0.04
MDC1-209ENST00000613547 WWC2Q6AWC2 1192 aa15.27■□□□□ 0.04
MDC1-209ENST00000613547 TEX2Q8IWB9 1127 aa15.27■□□□□ 0.04
MDC1-209ENST00000613547 NECAB1Q8N987 351 aa15.27■□□□□ 0.04
MDC1-209ENST00000613547 CCDC148Q8NFR7 591 aa15.27■□□□□ 0.04
MDC1-209ENST00000613547 SMARCC2Q8TAQ2 1214 aa15.27■□□□□ 0.04
MDC1-209ENST00000613547 WASF1Q92558 559 aa15.27■□□□□ 0.04
MDC1-209ENST00000613547 ABHD8Q96I13 439 aa15.27■□□□□ 0.04
MDC1-209ENST00000613547 TINF2Q9BSI4 451 aa15.27■□□□□ 0.04
MDC1-209ENST00000613547 GLT8D2Q9H1C3 349 aa15.27■□□□□ 0.04
MDC1-209ENST00000613547 PSTPIP2Q9H939 334 aa15.27■□□□□ 0.04
MDC1-209ENST00000613547 BARHL2Q9NY43 387 aa15.27■□□□□ 0.04
MDC1-209ENST00000613547 CNPY2Q9Y2B0 182 aa15.27■□□□□ 0.04
MDC1-209ENST00000613547 PLXNB2O15031 1838 aa15.27■□□□□ 0.03
MDC1-209ENST00000613547 SYNGAP1Q96PV0 1343 aa15.26■□□□□ 0.03
MDC1-209ENST00000613547 STK36Q9NRP7 1315 aa15.26■□□□□ 0.03
MDC1-209ENST00000613547 SOWAHBA6NEL2 793 aa15.26■□□□□ 0.03
MDC1-209ENST00000613547 LARGE1O95461 756 aa15.26■□□□□ 0.03
MDC1-209ENST00000613547 PRKAR2AP13861 404 aaKnown RBP15.26■□□□□ 0.03
MDC1-209ENST00000613547 CYP2C19P33261 490 aa15.26■□□□□ 0.03
MDC1-209ENST00000613547 HSD17B4P51659 736 aa15.26■□□□□ 0.03
MDC1-209ENST00000613547 SYTL5Q8TDW5 730 aaPredicted RBP15.26■□□□□ 0.03
MDC1-209ENST00000613547 ZNF333Q96JL9 665 aa15.26■□□□□ 0.03
MDC1-209ENST00000613547 FLRT1Q9NZU1 646 aa15.26■□□□□ 0.03
MDC1-209ENST00000613547 STXBP3O00186 592 aa15.25■□□□□ 0.03
MDC1-209ENST00000613547 OPLAHO14841 1288 aa15.25■□□□□ 0.03
MDC1-209ENST00000613547 PPFIA3O75145 1194 aa15.25■□□□□ 0.03
MDC1-209ENST00000613547 XBP1P17861 261 aa15.25■□□□□ 0.03
MDC1-209ENST00000613547 HOXA13P31271 388 aaPredicted RBP15.25■□□□□ 0.03
MDC1-209ENST00000613547 ADCY7P51828 1080 aa15.25■□□□□ 0.03
MDC1-209ENST00000613547 MAMDC4Q6UXC1 1216 aa15.25■□□□□ 0.03
MDC1-209ENST00000613547 CCDC83Q8IWF9 413 aa15.25■□□□□ 0.03
MDC1-209ENST00000613547 NSUN6Q8TEA1 469 aaKnown RBP15.25■□□□□ 0.03
MDC1-209ENST00000613547 TBC1D5Q92609 795 aa15.25■□□□□ 0.03
MDC1-209ENST00000613547 RMDN3Q96TC7 470 aa15.25■□□□□ 0.03
MDC1-209ENST00000613547 LLPHQ9BRT6 129 aaKnown RBP15.25■□□□□ 0.03
MDC1-209ENST00000613547 TMEM106CQ9BVX2 250 aa15.25■□□□□ 0.03
MDC1-209ENST00000613547 HMX1Q9NP08 348 aaPredicted RBP15.25■□□□□ 0.03
MDC1-209ENST00000613547 NRBP1Q9UHY1 535 aa15.25■□□□□ 0.03
MDC1-209ENST00000613547 RPTORQ8N122 1335 aa15.24■□□□□ 0.03
MDC1-209ENST00000613547 PIK3CDO00329 1044 aa15.24■□□□□ 0.03
MDC1-209ENST00000613547 MYCP01106 439 aaPredicted RBP15.24■□□□□ 0.03
MDC1-209ENST00000613547 CCL5P13501 91 aa15.24■□□□□ 0.03
MDC1-209ENST00000613547 GNA11P29992 359 aa15.24■□□□□ 0.03
MDC1-209ENST00000613547 ALDH5A1P51649 535 aaPredicted RBP15.24■□□□□ 0.03
MDC1-209ENST00000613547 CACNB2Q08289 660 aaPredicted RBP15.24■□□□□ 0.03
MDC1-209ENST00000613547 PDE4DQ08499 809 aa15.24■□□□□ 0.03
MDC1-209ENST00000613547 PKN1Q16512 942 aa15.24■□□□□ 0.03
MDC1-209ENST00000613547 MAP3K21Q5TCX8 1036 aa15.24■□□□□ 0.03
MDC1-209ENST00000613547 ARHGEF16Q5VV41 709 aa15.24■□□□□ 0.03
MDC1-209ENST00000613547 MCTP2Q6DN12 878 aa15.24■□□□□ 0.03
MDC1-209ENST00000613547 FAM177A1Q8N128 213 aaPredicted RBP15.24■□□□□ 0.03
MDC1-209ENST00000613547 C6orf50Q9HD87 102 aa15.24■□□□□ 0.03
MDC1-209ENST00000613547 SH3GLB2Q9NR46 395 aa15.24■□□□□ 0.03
MDC1-209ENST00000613547 ORC3Q9UBD5 711 aaPredicted RBP15.24■□□□□ 0.03
MDC1-209ENST00000613547 ESYT2A0FGR8 921 aa15.23■□□□□ 0.03
MDC1-209ENST00000613547 SMCO2A6NFE2 343 aa15.23■□□□□ 0.03
MDC1-209ENST00000613547 SPDYE3A6NKU9 549 aa15.23■□□□□ 0.03
MDC1-209ENST00000613547 CNGA1P29973 690 aa15.23■□□□□ 0.03
MDC1-209ENST00000613547 TRIM32Q13049 653 aa15.23■□□□□ 0.03
MDC1-209ENST00000613547 ARMCX2Q7L311 632 aa15.23■□□□□ 0.03
MDC1-209ENST00000613547 FCHSD1Q86WN1 690 aa15.23■□□□□ 0.03
MDC1-209ENST00000613547 BICD2Q8TD16 824 aa15.23■□□□□ 0.03
MDC1-209ENST00000613547 FGD4Q96M96 766 aa15.23■□□□□ 0.03
MDC1-209ENST00000613547 PURBQ96QR8 312 aaKnown RBP15.23■□□□□ 0.03
MDC1-209ENST00000613547 TAAR1Q96RJ0 339 aa15.23■□□□□ 0.03
MDC1-209ENST00000613547 IWS1Q96ST2 819 aa15.23■□□□□ 0.03
MDC1-209ENST00000613547 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.23■□□□□ 0.03
MDC1-209ENST00000613547 RNF208Q9H0X6 261 aa15.23■□□□□ 0.03
MDC1-209ENST00000613547 ABHD16BQ9H3Z7 469 aa15.23■□□□□ 0.03
MDC1-209ENST00000613547 EHMT1Q9H9B1 1298 aa15.23■□□□□ 0.03
MDC1-209ENST00000613547 RIC8AQ9NPQ8 531 aa15.23■□□□□ 0.03
MDC1-209ENST00000613547 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.23■□□□□ 0.03
MDC1-209ENST00000613547 MSCO60682 206 aa15.22■□□□□ 0.03
MDC1-209ENST00000613547 CTDNEP1O95476 244 aa15.22■□□□□ 0.03
MDC1-209ENST00000613547 IGHA2P01877 340 aa15.22■□□□□ 0.03
MDC1-209ENST00000613547 CYBAP13498 195 aa15.22■□□□□ 0.03
MDC1-209ENST00000613547 NLRP5P59047 1200 aa15.22■□□□□ 0.03
MDC1-209ENST00000613547 HMGN5P82970 282 aaKnown RBP15.22■□□□□ 0.03
MDC1-209ENST00000613547 USP17L6PQ6QN14 398 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms