RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 MYLIPQ8WY64 445 aa17.32■□□□□ 0.36
FDPS-221ENST00000612683 WDR11Q9BZH6 1224 aa17.32■□□□□ 0.36
FDPS-221ENST00000612683 UBA5Q9GZZ9 404 aa17.32■□□□□ 0.36
FDPS-221ENST00000612683 NEDD4P46934 1319 aa17.31■□□□□ 0.36
FDPS-221ENST00000612683 HIP1O00291 1037 aa17.31■□□□□ 0.36
FDPS-221ENST00000612683 KDM4AO75164 1064 aa17.31■□□□□ 0.36
FDPS-221ENST00000612683 SNHG28P0DPA3 235 aa17.31■□□□□ 0.36
FDPS-221ENST00000612683 ACRP10323 421 aa17.31■□□□□ 0.36
FDPS-221ENST00000612683 CYP2C18P33260 490 aa17.31■□□□□ 0.36
FDPS-221ENST00000612683 DUSP28Q4G0W2 176 aa17.31■□□□□ 0.36
FDPS-221ENST00000612683 CCDC178Q5BJE1 867 aa17.31■□□□□ 0.36
FDPS-221ENST00000612683 GPATCH4Q5T3I0 446 aaKnown RBP17.31■□□□□ 0.36
FDPS-221ENST00000612683 SLC30A10Q6XR72 485 aa17.31■□□□□ 0.36
FDPS-221ENST00000612683 C16orf59Q7L2K0 433 aa17.31■□□□□ 0.36
FDPS-221ENST00000612683 IQCA1Q86XH1 822 aa17.31■□□□□ 0.36
FDPS-221ENST00000612683 LAMA2P24043 3122 aaKnown RBP17.31■□□□□ 0.36
FDPS-221ENST00000612683 GRIN2DO15399 1336 aa17.3■□□□□ 0.36
FDPS-221ENST00000612683 LOC102724159A0A0B4J2E5 919 aa17.3■□□□□ 0.36
FDPS-221ENST00000612683 PSMC6P62333 389 aa17.3■□□□□ 0.36
FDPS-221ENST00000612683 RPS6P62753 249 aaKnown RBP17.3■□□□□ 0.36
FDPS-221ENST00000612683 PDE4DQ08499 809 aa17.3■□□□□ 0.36
FDPS-221ENST00000612683 PWP2Q15269 919 aaKnown RBP17.3■□□□□ 0.36
FDPS-221ENST00000612683 USH1GQ495M9 461 aa17.3■□□□□ 0.36
FDPS-221ENST00000612683 ZNF365Q70YC5 407 aa17.3■□□□□ 0.36
FDPS-221ENST00000612683 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.3■□□□□ 0.36
FDPS-221ENST00000612683 MPHOSPH6Q99547 160 aaKnown RBP17.3■□□□□ 0.36
FDPS-221ENST00000612683 SEZ6LQ9BYH1 1024 aa17.3■□□□□ 0.36
FDPS-221ENST00000612683 CPVLQ9H3G5 476 aa17.3■□□□□ 0.36
FDPS-221ENST00000612683 KAT14Q9H8E8 782 aa17.3■□□□□ 0.36
FDPS-221ENST00000612683 TMEM265A0A087WTH1 108 aa17.29■□□□□ 0.36
FDPS-221ENST00000612683 B4E1Z4 1266 aa17.29■□□□□ 0.36
FDPS-221ENST00000612683 DNAJB2P25686 324 aa17.29■□□□□ 0.36
FDPS-221ENST00000612683 PNMA1Q8ND90 353 aa17.29■□□□□ 0.36
FDPS-221ENST00000612683 MAFAQ8NHW3 353 aaPredicted RBP17.29■□□□□ 0.36
FDPS-221ENST00000612683 TRPV6Q9H1D0 765 aa17.29■□□□□ 0.36
FDPS-221ENST00000612683 HIPK3Q9H422 1215 aa17.29■□□□□ 0.36
FDPS-221ENST00000612683 WDR19Q8NEZ3 1342 aa17.28■□□□□ 0.36
FDPS-221ENST00000612683 LCTP09848 1927 aa17.28■□□□□ 0.36
FDPS-221ENST00000612683 RBM47A0AV96 593 aaKnown RBP17.28■□□□□ 0.36
FDPS-221ENST00000612683 GRXCR1A8MXD5 290 aa17.28■□□□□ 0.36
FDPS-221ENST00000612683 B4DLN1 442 aa17.28■□□□□ 0.36
FDPS-221ENST00000612683 B4GALT4O60513 344 aa17.28■□□□□ 0.36
FDPS-221ENST00000612683 MYL3P08590 195 aa17.28■□□□□ 0.36
FDPS-221ENST00000612683 FOSL2P15408 326 aa17.28■□□□□ 0.36
FDPS-221ENST00000612683 NT5C2P49902 561 aa17.28■□□□□ 0.36
FDPS-221ENST00000612683 MRPL12P52815 198 aaKnown RBP17.28■□□□□ 0.36
FDPS-221ENST00000612683 CCL23P55773 120 aa17.28■□□□□ 0.36
FDPS-221ENST00000612683 IMMTQ16891 758 aaKnown RBP17.28■□□□□ 0.36
FDPS-221ENST00000612683 PSRC1Q6PGN9 363 aaPredicted RBP17.28■□□□□ 0.36
FDPS-221ENST00000612683 DNERQ8NFT8 737 aa17.28■□□□□ 0.36
FDPS-221ENST00000612683 OR6J1Q8NGC5 347 aa17.28■□□□□ 0.36
FDPS-221ENST00000612683 ZSCAN10Q96SZ4 725 aaPredicted RBP17.28■□□□□ 0.36
FDPS-221ENST00000612683 DSCC1Q9BVC3 393 aa17.28■□□□□ 0.36
FDPS-221ENST00000612683 IL23AQ9NPF7 189 aa17.28■□□□□ 0.36
FDPS-221ENST00000612683 GPHNQ9NQX3 736 aaPredicted RBP17.28■□□□□ 0.36
FDPS-221ENST00000612683 POLR3EQ9NVU0 708 aa17.28■□□□□ 0.36
FDPS-221ENST00000612683 ZSWIM5Q9P217 1185 aa17.28■□□□□ 0.36
FDPS-221ENST00000612683 CTNNA3Q9UI47 895 aa17.28■□□□□ 0.36
FDPS-221ENST00000612683 FGBP02675 491 aa17.27■□□□□ 0.36
FDPS-221ENST00000612683 CPT1AP50416 773 aa17.27■□□□□ 0.36
FDPS-221ENST00000612683 GRIN2CQ14957 1233 aa17.27■□□□□ 0.36
FDPS-221ENST00000612683 ANKS1AQ92625 1134 aa17.27■□□□□ 0.36
FDPS-221ENST00000612683 TIFAQ96CG3 184 aa17.27■□□□□ 0.36
FDPS-221ENST00000612683 ZNF576Q9H609 170 aa17.27■□□□□ 0.36
FDPS-221ENST00000612683 VAT1LQ9HCJ6 419 aa17.27■□□□□ 0.36
FDPS-221ENST00000612683 UMODL1Q5DID0 1318 aa17.26■□□□□ 0.35
FDPS-221ENST00000612683 NKRFO15226 690 aaKnown RBP eCLIP17.26■□□□□ 0.35
FDPS-221ENST00000612683 DHX16O60231 1041 aaKnown RBP17.26■□□□□ 0.35
FDPS-221ENST00000612683 PPP2R5BQ15173 497 aa17.26■□□□□ 0.35
FDPS-221ENST00000612683 CDC37Q16543 378 aaPredicted RBP17.26■□□□□ 0.35
FDPS-221ENST00000612683 BRDTQ58F21 947 aaPredicted RBP17.26■□□□□ 0.35
FDPS-221ENST00000612683 ADGRF4Q8IZF3 695 aa17.26■□□□□ 0.35
FDPS-221ENST00000612683 RGS22Q8NE09 1264 aa17.26■□□□□ 0.35
FDPS-221ENST00000612683 TBC1D5Q92609 795 aa17.26■□□□□ 0.35
FDPS-221ENST00000612683 KRT23Q9C075 422 aa17.26■□□□□ 0.35
FDPS-221ENST00000612683 LRRC37A2A6NM11 1700 aa17.26■□□□□ 0.35
FDPS-221ENST00000612683 SUPT20HL2P0C7V6 817 aa17.25■□□□□ 0.35
FDPS-221ENST00000612683 TXNP10599 105 aaKnown RBP17.25■□□□□ 0.35
FDPS-221ENST00000612683 EDNRBP24530 442 aa17.25■□□□□ 0.35
FDPS-221ENST00000612683 PBX2P40425 430 aa17.25■□□□□ 0.35
FDPS-221ENST00000612683 PURAQ00577 322 aaKnown RBP17.25■□□□□ 0.35
FDPS-221ENST00000612683 ASPRV1Q53RT3 343 aa17.25■□□□□ 0.35
FDPS-221ENST00000612683 RASIP1Q5U651 963 aa17.25■□□□□ 0.35
FDPS-221ENST00000612683 RPUSD2Q8IZ73 545 aaKnown RBP17.25■□□□□ 0.35
FDPS-221ENST00000612683 ENAHQ8N8S7 591 aaPredicted RBP17.25■□□□□ 0.35
FDPS-221ENST00000612683 SCFD2Q8WU76 684 aa17.25■□□□□ 0.35
FDPS-221ENST00000612683 HERVK_113Q902F9 699 aa17.25■□□□□ 0.35
FDPS-221ENST00000612683 COPS5Q92905 334 aa17.25■□□□□ 0.35
FDPS-221ENST00000612683 MTG1Q9BT17 334 aaPredicted RBP17.25■□□□□ 0.35
FDPS-221ENST00000612683 NOC4LQ9BVI4 516 aaKnown RBP17.25■□□□□ 0.35
FDPS-221ENST00000612683 ALDH8A1Q9H2A2 487 aaPredicted RBP17.25■□□□□ 0.35
FDPS-221ENST00000612683 MTIF3Q9H2K0 278 aaKnown RBP17.25■□□□□ 0.35
FDPS-221ENST00000612683 A0A0C4DFX4 3053 aa17.25■□□□□ 0.35
FDPS-221ENST00000612683 RAD50Q92878 1312 aa17.24■□□□□ 0.35
FDPS-221ENST00000612683 PARP1P09874 1014 aaKnown RBP17.24■□□□□ 0.35
FDPS-221ENST00000612683 FAM47CQ5HY64 1035 aa17.24■□□□□ 0.35
FDPS-221ENST00000612683 OTOP2Q7RTS6 562 aa17.24■□□□□ 0.35
FDPS-221ENST00000612683 TAAR1Q96RJ0 339 aa17.24■□□□□ 0.35
FDPS-221ENST00000612683 UBAC1Q9BSL1 405 aa17.24■□□□□ 0.35
FDPS-221ENST00000612683 COL25A1Q9BXS0 654 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms