RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 ZMYM1Q5SVZ6 1142 aa27.8■■■□□ 2.04
MMP28-203ENST00000612672 RCSD1Q6JBY9 416 aa27.8■■■□□ 2.04
MMP28-203ENST00000612672 MICALL1Q8N3F8 863 aa27.8■■■□□ 2.04
MMP28-203ENST00000612672 GPATCH3Q96I76 525 aa27.8■■■□□ 2.04
MMP28-203ENST00000612672 SLC4A7Q9Y6M7 1214 aa27.8■■■□□ 2.04
MMP28-203ENST00000612672 COL4A4P53420 1690 aaPredicted RBP27.79■■■□□ 2.04
MMP28-203ENST00000612672 RBAK-RBAKDNI3L0D1 243 aa27.79■■■□□ 2.04
MMP28-203ENST00000612672 ARHGEF15O94989 841 aa27.79■■■□□ 2.04
MMP28-203ENST00000612672 TTBK2Q6IQ55 1244 aa27.79■■■□□ 2.04
MMP28-203ENST00000612672 KIAA1211Q6ZU35 1233 aa27.79■■■□□ 2.04
MMP28-203ENST00000612672 VTA1Q9NP79 307 aa27.79■■■□□ 2.04
MMP28-203ENST00000612672 CCPG1Q9ULG6 757 aa27.79■■■□□ 2.04
MMP28-203ENST00000612672 Q9Y3F1 56 aa27.79■■■□□ 2.04
MMP28-203ENST00000612672 EPOPA6NHQ4 379 aa27.78■■■□□ 2.04
MMP28-203ENST00000612672 ZBBXA8MT70 800 aa27.78■■■□□ 2.04
MMP28-203ENST00000612672 NFIBO00712 420 aa27.78■■■□□ 2.04
MMP28-203ENST00000612672 NACAP1Q9BZK3 213 aa27.78■■■□□ 2.04
MMP28-203ENST00000612672 PCDHA11Q9Y5I1 949 aa27.78■■■□□ 2.04
MMP28-203ENST00000612672 ZEB2O60315 1214 aa27.77■■■□□ 2.04
MMP28-203ENST00000612672 SLC16A2P36021 539 aa27.77■■■□□ 2.04
MMP28-203ENST00000612672 NOVP48745 357 aa27.77■■■□□ 2.04
MMP28-203ENST00000612672 BAATQ14032 418 aaPredicted RBP27.77■■■□□ 2.04
MMP28-203ENST00000612672 DUSP28Q4G0W2 176 aa27.77■■■□□ 2.04
MMP28-203ENST00000612672 RANBP17Q9H2T7 1088 aaKnown RBP27.77■■■□□ 2.04
MMP28-203ENST00000612672 TNKSO95271 1327 aa27.76■■■□□ 2.03
MMP28-203ENST00000612672 ICAM1P05362 532 aa27.76■■■□□ 2.03
MMP28-203ENST00000612672 BMP1P13497 986 aa27.76■■■□□ 2.03
MMP28-203ENST00000612672 ATP2A2P16615 1042 aaKnown RBP27.76■■■□□ 2.03
MMP28-203ENST00000612672 ALDH5A1P51649 535 aaPredicted RBP27.76■■■□□ 2.03
MMP28-203ENST00000612672 KCNQ1P51787 676 aa27.76■■■□□ 2.03
MMP28-203ENST00000612672 PURAQ00577 322 aaKnown RBP27.76■■■□□ 2.03
MMP28-203ENST00000612672 VPS53Q5VIR6 699 aa27.76■■■□□ 2.03
MMP28-203ENST00000612672 KRT40Q6A162 431 aa27.76■■■□□ 2.03
MMP28-203ENST00000612672 DEFB128Q7Z7B8 93 aa27.76■■■□□ 2.03
MMP28-203ENST00000612672 FSD1Q9BTV5 496 aa27.76■■■□□ 2.03
MMP28-203ENST00000612672 TSPY2A6NKD2 308 aa27.75■■■□□ 2.03
MMP28-203ENST00000612672 CA3P07451 260 aa27.75■■■□□ 2.03
MMP28-203ENST00000612672 SLC30A10Q6XR72 485 aa27.75■■■□□ 2.03
MMP28-203ENST00000612672 SEZ6LQ9BYH1 1024 aa27.75■■■□□ 2.03
MMP28-203ENST00000612672 CERS4Q9HA82 394 aa27.75■■■□□ 2.03
MMP28-203ENST00000612672 TRIP12Q14669 1992 aaPredicted RBP27.75■■■□□ 2.03
MMP28-203ENST00000612672 SLC3A2P08195 630 aaKnown RBP27.74■■■□□ 2.03
MMP28-203ENST00000612672 CCDC96Q2M329 555 aa27.74■■■□□ 2.03
MMP28-203ENST00000612672 SPRED2Q7Z698 418 aa27.74■■■□□ 2.03
MMP28-203ENST00000612672 RPUSD2Q8IZ73 545 aaKnown RBP27.74■■■□□ 2.03
MMP28-203ENST00000612672 WDR11Q9BZH6 1224 aa27.74■■■□□ 2.03
MMP28-203ENST00000612672 TTC41PQ6P2S7 1318 aa27.73■■■□□ 2.03
MMP28-203ENST00000612672 RBM47A0AV96 593 aaKnown RBP27.73■■■□□ 2.03
MMP28-203ENST00000612672 MYL3P08590 195 aa27.73■■■□□ 2.03
MMP28-203ENST00000612672 MTCH2Q9Y6C9 303 aa27.73■■■□□ 2.03
MMP28-203ENST00000612672 CLEC4DQ8WXI8 215 aa27.72■■■□□ 2.03
MMP28-203ENST00000612672 COPS5Q92905 334 aa27.72■■■□□ 2.03
MMP28-203ENST00000612672 BRWD1Q9NSI6 2320 aa27.72■■■□□ 2.03
MMP28-203ENST00000612672 FRMPD2Q68DX3 1309 aaPredicted RBP27.71■■■□□ 2.03
MMP28-203ENST00000612672 RANBP6O60518 1105 aaKnown RBP27.71■■■□□ 2.03
MMP28-203ENST00000612672 NBPF20Q3BBV1 942 aa27.71■■■□□ 2.03
MMP28-203ENST00000612672 BTNL9Q6UXG8 535 aa27.71■■■□□ 2.03
MMP28-203ENST00000612672 OR6J1Q8NGC5 347 aa27.71■■■□□ 2.03
MMP28-203ENST00000612672 DCAF4Q8WV16 495 aa27.71■■■□□ 2.03
MMP28-203ENST00000612672 POLR3EQ9NVU0 708 aa27.71■■■□□ 2.03
MMP28-203ENST00000612672 SALL3Q9BXA9 1300 aa27.7■■■□□ 2.03
MMP28-203ENST00000612672 SYDE2Q5VT97 1194 aa27.7■■■□□ 2.02
MMP28-203ENST00000612672 ANAPC4Q9UJX5 808 aa27.7■■■□□ 2.02
MMP28-203ENST00000612672 LRRFIP1Q32MZ4 808 aaKnown RBP27.69■■■□□ 2.02
MMP28-203ENST00000612672 TMEM67Q5HYA8 995 aa27.69■■■□□ 2.02
MMP28-203ENST00000612672 MTG1Q9BT17 334 aaPredicted RBP27.69■■■□□ 2.02
MMP28-203ENST00000612672 PTPDC1A2A3K4 754 aa27.68■■■□□ 2.02
MMP28-203ENST00000612672 ORC4O43929 436 aa27.68■■■□□ 2.02
MMP28-203ENST00000612672 PFKMP08237 780 aa27.68■■■□□ 2.02
MMP28-203ENST00000612672 POU3F3P20264 500 aaPredicted RBP27.68■■■□□ 2.02
MMP28-203ENST00000612672 IL27Q8NEV9 243 aa27.68■■■□□ 2.02
MMP28-203ENST00000612672 TMEM47Q9BQJ4 181 aa27.68■■■□□ 2.02
MMP28-203ENST00000612672 GPCPD1Q9NPB8 672 aa27.68■■■□□ 2.02
MMP28-203ENST00000612672 ADD3Q9UEY8 706 aaKnown RBP27.68■■■□□ 2.02
MMP28-203ENST00000612672 PCDHB15Q9Y5E8 787 aa27.68■■■□□ 2.02
MMP28-203ENST00000612672 ERC2O15083 957 aa27.67■■■□□ 2.02
MMP28-203ENST00000612672 ARIH2O95376 493 aa27.67■■■□□ 2.02
MMP28-203ENST00000612672 FGRP09769 529 aa27.67■■■□□ 2.02
MMP28-203ENST00000612672 EDNRBP24530 442 aa27.67■■■□□ 2.02
MMP28-203ENST00000612672 CALML3P27482 149 aa27.67■■■□□ 2.02
MMP28-203ENST00000612672 CPT1AP50416 773 aa27.67■■■□□ 2.02
MMP28-203ENST00000612672 TAP1Q03518 808 aa27.67■■■□□ 2.02
MMP28-203ENST00000612672 FAM47CQ5HY64 1035 aa27.67■■■□□ 2.02
MMP28-203ENST00000612672 PPP4R3BQ5MIZ7 849 aa27.67■■■□□ 2.02
MMP28-203ENST00000612672 IQCF3P0C7M6 154 aa27.66■■■□□ 2.02
MMP28-203ENST00000612672 SUPT20HL2P0C7V6 817 aa27.66■■■□□ 2.02
MMP28-203ENST00000612672 DIEXFQ68CQ4 756 aaKnown RBP27.66■■■□□ 2.02
MMP28-203ENST00000612672 CTAGE1Q96RT6 745 aa27.66■■■□□ 2.02
MMP28-203ENST00000612672 PLA2G5P39877 138 aa27.65■■■□□ 2.02
MMP28-203ENST00000612672 SKIV2LQ15477 1246 aaKnown RBP27.65■■■□□ 2.02
MMP28-203ENST00000612672 TSPYL2Q9H2G4 693 aaPredicted RBP27.65■■■□□ 2.02
MMP28-203ENST00000612672 A6NJR5 290 aa27.64■■■□□ 2.02
MMP28-203ENST00000612672 MX1P20591 662 aa27.64■■■□□ 2.02
MMP28-203ENST00000612672 RPS6P62753 249 aaKnown RBP27.64■■■□□ 2.02
MMP28-203ENST00000612672 GPNMBQ14956 572 aa27.64■■■□□ 2.02
MMP28-203ENST00000612672 TMCO2Q7Z6W1 182 aaPredicted RBP27.64■■■□□ 2.02
MMP28-203ENST00000612672 HERC6Q8IVU3 1022 aa27.64■■■□□ 2.02
MMP28-203ENST00000612672 ARNTL2Q8WYA1 636 aa27.64■■■□□ 2.02
MMP28-203ENST00000612672 SLC9A7Q96T83 725 aa27.64■■■□□ 2.02
MMP28-203ENST00000612672 KIAA1217Q5T5P2 1943 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms