RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 GOLGA8BA8MQT2 603 aa10.18□□□□□ -0.78
SMAD4-217ENST00000611848 ELNP15502 786 aa10.18□□□□□ -0.78
SMAD4-217ENST00000611848 METAP2P50579 478 aaKnown RBP eCLIP10.18□□□□□ -0.78
SMAD4-217ENST00000611848 ZNF445P59923 1031 aa10.18□□□□□ -0.78
SMAD4-217ENST00000611848 ST3GAL1Q11201 340 aa10.18□□□□□ -0.78
SMAD4-217ENST00000611848 TOB2Q14106 344 aaPredicted RBP10.18□□□□□ -0.78
SMAD4-217ENST00000611848 ME3Q16798 604 aa10.18□□□□□ -0.78
SMAD4-217ENST00000611848 SLC35G1Q2M3R5 365 aa10.18□□□□□ -0.78
SMAD4-217ENST00000611848 ZNF792Q3KQV3 632 aa10.18□□□□□ -0.78
SMAD4-217ENST00000611848 USH1GQ495M9 461 aa10.18□□□□□ -0.78
SMAD4-217ENST00000611848 MFSD14CQ5VZR4 134 aa10.18□□□□□ -0.78
SMAD4-217ENST00000611848 OLFML2BQ68BL8 750 aa10.18□□□□□ -0.78
SMAD4-217ENST00000611848 TMTC3Q6ZXV5 915 aa10.18□□□□□ -0.78
SMAD4-217ENST00000611848 GAS2L3Q86XJ1 694 aa10.18□□□□□ -0.78
SMAD4-217ENST00000611848 RAB11FIP4Q86YS3 637 aa10.18□□□□□ -0.78
SMAD4-217ENST00000611848 SRBD1Q8N5C6 995 aaKnown RBP10.18□□□□□ -0.78
SMAD4-217ENST00000611848 RGS22Q8NE09 1264 aa10.18□□□□□ -0.78
SMAD4-217ENST00000611848 GPT2Q8TD30 523 aa10.18□□□□□ -0.78
SMAD4-217ENST00000611848 TRIB2Q92519 343 aa10.18□□□□□ -0.78
SMAD4-217ENST00000611848 PIGSQ96S52 555 aa10.18□□□□□ -0.78
SMAD4-217ENST00000611848 GRPEL1Q9HAV7 217 aa10.18□□□□□ -0.78
SMAD4-217ENST00000611848 A1CFQ9NQ94 594 aaKnown RBP10.18□□□□□ -0.78
SMAD4-217ENST00000611848 NAP1L2Q9ULW6 460 aaPredicted RBP10.18□□□□□ -0.78
SMAD4-217ENST00000611848 SMC3Q9UQE7 1217 aa10.18□□□□□ -0.78
SMAD4-217ENST00000611848 MRPL11Q9Y3B7 192 aaKnown RBP10.18□□□□□ -0.78
SMAD4-217ENST00000611848 HTTP42858 3142 aa10.17□□□□□ -0.78
SMAD4-217ENST00000611848 NID2Q14112 1375 aa10.17□□□□□ -0.78
SMAD4-217ENST00000611848 DNAJC25-GNG10A0A024R161 153 aa10.17□□□□□ -0.78
SMAD4-217ENST00000611848 PLEKHA8P1O95397 391 aa10.17□□□□□ -0.78
SMAD4-217ENST00000611848 INHAP05111 366 aa10.17□□□□□ -0.78
SMAD4-217ENST00000611848 PGK2P07205 417 aa10.17□□□□□ -0.78
SMAD4-217ENST00000611848 ZSCAN22P10073 491 aaPredicted RBP10.17□□□□□ -0.78
SMAD4-217ENST00000611848 SYT1P21579 422 aa10.17□□□□□ -0.78
SMAD4-217ENST00000611848 CCL14Q16627 93 aa10.17□□□□□ -0.78
SMAD4-217ENST00000611848 MUM1L1Q5H9M0 696 aa10.17□□□□□ -0.78
SMAD4-217ENST00000611848 NSMFQ6X4W1 530 aa10.17□□□□□ -0.78
SMAD4-217ENST00000611848 HOMER1Q86YM7 354 aa10.17□□□□□ -0.78
SMAD4-217ENST00000611848 MCF2L2Q86YR7 1114 aa10.17□□□□□ -0.78
SMAD4-217ENST00000611848 MSL3Q8N5Y2 521 aaKnown RBP10.17□□□□□ -0.78
SMAD4-217ENST00000611848 RRP36Q96EU6 259 aaKnown RBP10.17□□□□□ -0.78
SMAD4-217ENST00000611848 ZNF274Q96GC6 653 aaPredicted RBP10.17□□□□□ -0.78
SMAD4-217ENST00000611848 MAML3Q96JK9 1138 aa10.17□□□□□ -0.78
SMAD4-217ENST00000611848 LARP6Q9BRS8 491 aaKnown RBP10.17□□□□□ -0.78
SMAD4-217ENST00000611848 SEC63Q9UGP8 760 aaKnown RBP10.17□□□□□ -0.78
SMAD4-217ENST00000611848 TPCN1Q9ULQ1 816 aa10.17□□□□□ -0.78
SMAD4-217ENST00000611848 PCDHA1Q9Y5I3 950 aa10.17□□□□□ -0.78
SMAD4-217ENST00000611848 MCM3APO60318 1980 aa10.16□□□□□ -0.78
SMAD4-217ENST00000611848 CCDC85CA6NKD9 419 aa10.16□□□□□ -0.78
SMAD4-217ENST00000611848 POTEB2H3BUK9 544 aa10.16□□□□□ -0.78
SMAD4-217ENST00000611848 NFIBO00712 420 aa10.16□□□□□ -0.78
SMAD4-217ENST00000611848 STX6O43752 255 aa10.16□□□□□ -0.78
SMAD4-217ENST00000611848 MBD3O95983 291 aa10.16□□□□□ -0.78
SMAD4-217ENST00000611848 IGHA2P01877 340 aa10.16□□□□□ -0.78
SMAD4-217ENST00000611848 PDIA4P13667 645 aaKnown RBP10.16□□□□□ -0.78
SMAD4-217ENST00000611848 TAL1P17542 331 aaPredicted RBP10.16□□□□□ -0.78
SMAD4-217ENST00000611848 PDIA3P30101 505 aaKnown RBP10.16□□□□□ -0.78
SMAD4-217ENST00000611848 FOXD4L5Q5VV16 416 aaPredicted RBP10.16□□□□□ -0.78
SMAD4-217ENST00000611848 ZNF467Q7Z7K2 595 aaPredicted RBP10.16□□□□□ -0.78
SMAD4-217ENST00000611848 CCDC83Q8IWF9 413 aa10.16□□□□□ -0.78
SMAD4-217ENST00000611848 SAMD3Q8N6K7 520 aa10.16□□□□□ -0.78
SMAD4-217ENST00000611848 FAM133AQ8N9E0 248 aa10.16□□□□□ -0.78
SMAD4-217ENST00000611848 TMEM87AQ8NBN3 555 aa10.16□□□□□ -0.78
SMAD4-217ENST00000611848 CLEC4DQ8WXI8 215 aa10.16□□□□□ -0.78
SMAD4-217ENST00000611848 FOXD4L4Q8WXT5 416 aaPredicted RBP10.16□□□□□ -0.78
SMAD4-217ENST00000611848 TMEM106CQ9BVX2 250 aa10.16□□□□□ -0.78
SMAD4-217ENST00000611848 FAM217BQ9NTX9 383 aaPredicted RBP10.16□□□□□ -0.78
SMAD4-217ENST00000611848 CYP39A1Q9NYL5 469 aa10.16□□□□□ -0.78
SMAD4-217ENST00000611848 FLRT1Q9NZU1 646 aa10.16□□□□□ -0.78
SMAD4-217ENST00000611848 RPTORQ8N122 1335 aa10.15□□□□□ -0.78
SMAD4-217ENST00000611848 PTPDC1A2A3K4 754 aa10.15□□□□□ -0.78
SMAD4-217ENST00000611848 GJB2P29033 226 aa10.15□□□□□ -0.78
SMAD4-217ENST00000611848 CDC27P30260 824 aa10.15□□□□□ -0.78
SMAD4-217ENST00000611848 ADD1P35611 737 aaKnown RBP10.15□□□□□ -0.78
SMAD4-217ENST00000611848 BAATQ14032 418 aaPredicted RBP10.15□□□□□ -0.78
SMAD4-217ENST00000611848 ZSCAN23Q3MJ62 389 aa10.15□□□□□ -0.78
SMAD4-217ENST00000611848 MAP3K21Q5TCX8 1036 aa10.15□□□□□ -0.78
SMAD4-217ENST00000611848 RNF207Q6ZRF8 634 aa10.15□□□□□ -0.78
SMAD4-217ENST00000611848 CMTR1Q8N1G2 835 aaKnown RBP10.15□□□□□ -0.78
SMAD4-217ENST00000611848 CCDC82Q8N4S0 544 aa10.15□□□□□ -0.78
SMAD4-217ENST00000611848 CHAMP1Q96JM3 812 aa10.15□□□□□ -0.78
SMAD4-217ENST00000611848 TINF2Q9BSI4 451 aa10.15□□□□□ -0.78
SMAD4-217ENST00000611848 NRBP1Q9UHY1 535 aa10.15□□□□□ -0.78
SMAD4-217ENST00000611848 CENPFP49454 3210 aa10.15□□□□□ -0.78
SMAD4-217ENST00000611848 CNTNAP5Q8WYK1 1306 aa10.15□□□□□ -0.79
SMAD4-217ENST00000611848 LOC102724159A0A0B4J2E5 919 aa10.15□□□□□ -0.79
SMAD4-217ENST00000611848 PPP1R11O60927 126 aaPredicted RBP10.15□□□□□ -0.79
SMAD4-217ENST00000611848 PRKAR2AP13861 404 aaKnown RBP10.15□□□□□ -0.79
SMAD4-217ENST00000611848 CAPN2P17655 700 aa10.15□□□□□ -0.79
SMAD4-217ENST00000611848 RPS6P62753 249 aaKnown RBP10.15□□□□□ -0.79
SMAD4-217ENST00000611848 CACNB2Q08289 660 aaPredicted RBP10.15□□□□□ -0.79
SMAD4-217ENST00000611848 PWP2Q15269 919 aaKnown RBP10.15□□□□□ -0.79
SMAD4-217ENST00000611848 MTFR1Q15390 333 aa10.15□□□□□ -0.79
SMAD4-217ENST00000611848 CAVIN1Q6NZI2 390 aaKnown RBP10.15□□□□□ -0.79
SMAD4-217ENST00000611848 MAMDC4Q6UXC1 1216 aa10.15□□□□□ -0.79
SMAD4-217ENST00000611848 PIBF1Q8WXW3 757 aa10.15□□□□□ -0.79
SMAD4-217ENST00000611848 RNF208Q9H0X6 261 aa10.15□□□□□ -0.79
SMAD4-217ENST00000611848 HMX1Q9NP08 348 aaPredicted RBP10.15□□□□□ -0.79
SMAD4-217ENST00000611848 MAP3K20Q9NYL2 800 aaKnown RBP10.15□□□□□ -0.79
SMAD4-217ENST00000611848 RBM27Q9P2N5 1060 aaKnown RBP10.15□□□□□ -0.79
SMAD4-217ENST00000611848 ADD3Q9UEY8 706 aaKnown RBP10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms